RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 EIF2S2P20042 333 aaKnown RBP16.96■□□□□ 0.3
NEDD4L-223ENST00000588516 POLD1P28340 1107 aa16.96■□□□□ 0.3
NEDD4L-223ENST00000588516 HSPA4P34932 840 aa16.96■□□□□ 0.3
NEDD4L-223ENST00000588516 NBPF6Q5VWK0 638 aa16.96■□□□□ 0.3
NEDD4L-223ENST00000588516 CLASRPQ8N2M8 674 aaKnown RBP16.96■□□□□ 0.3
NEDD4L-223ENST00000588516 NECTIN2Q92692 538 aa16.96■□□□□ 0.3
NEDD4L-223ENST00000588516 NBPF4Q96M43 638 aa16.96■□□□□ 0.3
NEDD4L-223ENST00000588516 PPP1R9BQ96SB3 815 aa16.96■□□□□ 0.3
NEDD4L-223ENST00000588516 WDR33Q9C0J8 1336 aaKnown RBP16.95■□□□□ 0.3
NEDD4L-223ENST00000588516 RNMTO43148 476 aaKnown RBP16.95■□□□□ 0.3
NEDD4L-223ENST00000588516 OS9Q13438 667 aaPredicted RBP16.95■□□□□ 0.3
NEDD4L-223ENST00000588516 KSR2Q6VAB6 950 aa16.95■□□□□ 0.3
NEDD4L-223ENST00000588516 ATP6V1DQ9Y5K8 247 aa16.95■□□□□ 0.3
NEDD4L-223ENST00000588516 BCL9O00512 1426 aa16.94■□□□□ 0.3
NEDD4L-223ENST00000588516 ESPNB1AK53 854 aa16.94■□□□□ 0.3
NEDD4L-223ENST00000588516 EXOC5O00471 708 aa16.94■□□□□ 0.3
NEDD4L-223ENST00000588516 BRD1O95696 1058 aa16.94■□□□□ 0.3
NEDD4L-223ENST00000588516 HSPA6P17066 643 aa16.94■□□□□ 0.3
NEDD4L-223ENST00000588516 CSPP1Q1MSJ5 1256 aa16.94■□□□□ 0.3
NEDD4L-223ENST00000588516 ARHGEF25Q86VW2 580 aa16.94■□□□□ 0.3
NEDD4L-223ENST00000588516 PHAXQ9H814 394 aaKnown RBP16.94■□□□□ 0.3
NEDD4L-223ENST00000588516 C9orf78Q9NZ63 289 aaPredicted RBP16.94■□□□□ 0.3
NEDD4L-223ENST00000588516 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.94■□□□□ 0.3
NEDD4L-223ENST00000588516 SHANK3Q9BYB0 1731 aa16.93■□□□□ 0.3
NEDD4L-223ENST00000588516 RAD50Q92878 1312 aa16.93■□□□□ 0.3
NEDD4L-223ENST00000588516 PI4KAP2A4QPH2 592 aa16.93■□□□□ 0.3
NEDD4L-223ENST00000588516 SGSM2O43147 1006 aa16.93■□□□□ 0.3
NEDD4L-223ENST00000588516 PI4KAP1Q8N8J0 262 aa16.93■□□□□ 0.3
NEDD4L-223ENST00000588516 PANK2Q9BZ23 570 aa16.93■□□□□ 0.3
NEDD4L-223ENST00000588516 CHPF2Q9P2E5 772 aa16.93■□□□□ 0.3
NEDD4L-223ENST00000588516 GRIN3BO60391 1043 aa16.92■□□□□ 0.3
NEDD4L-223ENST00000588516 CSB-PGBD3P0DP91 1061 aa16.92■□□□□ 0.3
NEDD4L-223ENST00000588516 ZSCAN31Q96LW9 406 aaPredicted RBP16.92■□□□□ 0.3
NEDD4L-223ENST00000588516 GPBP1L1Q9HC44 474 aaPredicted RBP16.92■□□□□ 0.3
NEDD4L-223ENST00000588516 ABCC6O95255 1503 aa16.91■□□□□ 0.3
NEDD4L-223ENST00000588516 PRPF40AO75400 957 aaKnown RBP16.91■□□□□ 0.3
NEDD4L-223ENST00000588516 LETM1O95202 739 aaPredicted RBP16.91■□□□□ 0.3
NEDD4L-223ENST00000588516 ZSCAN23Q3MJ62 389 aa16.91■□□□□ 0.3
NEDD4L-223ENST00000588516 USHBP1Q8N6Y0 703 aa16.91■□□□□ 0.3
NEDD4L-223ENST00000588516 NLGN2Q8NFZ4 835 aa16.91■□□□□ 0.3
NEDD4L-223ENST00000588516 LINS1Q8NG48 757 aa16.91■□□□□ 0.3
NEDD4L-223ENST00000588516 PI4K2BQ8TCG2 481 aa16.91■□□□□ 0.3
NEDD4L-223ENST00000588516 ACSBG1Q96GR2 724 aa16.91■□□□□ 0.3
NEDD4L-223ENST00000588516 LGR6Q9HBX8 967 aa16.91■□□□□ 0.3
NEDD4L-223ENST00000588516 DIAPH3Q9NSV4 1193 aa16.91■□□□□ 0.3
NEDD4L-223ENST00000588516 ECHDC1Q9NTX5 307 aa16.91■□□□□ 0.3
NEDD4L-223ENST00000588516 HEG1Q9ULI3 1381 aa16.9■□□□□ 0.3
NEDD4L-223ENST00000588516 WDR17Q8IZU2 1322 aa16.9■□□□□ 0.3
NEDD4L-223ENST00000588516 IFIT2P09913 472 aaKnown RBP16.9■□□□□ 0.3
NEDD4L-223ENST00000588516 ZNF827Q17R98 1081 aa16.9■□□□□ 0.3
NEDD4L-223ENST00000588516 CAVIN1Q6NZI2 390 aaKnown RBP16.9■□□□□ 0.3
NEDD4L-223ENST00000588516 GAS2L3Q86XJ1 694 aa16.9■□□□□ 0.3
NEDD4L-223ENST00000588516 ZGPATQ8N5A5 531 aaKnown RBP16.9■□□□□ 0.3
NEDD4L-223ENST00000588516 ANKRD24Q8TF21 1146 aa16.9■□□□□ 0.3
NEDD4L-223ENST00000588516 EVI5LQ96CN4 794 aa16.9■□□□□ 0.3
NEDD4L-223ENST00000588516 TM6SF1Q9BZW5 370 aa16.9■□□□□ 0.3
NEDD4L-223ENST00000588516 IL1RAPL2Q9NP60 686 aa16.9■□□□□ 0.3
NEDD4L-223ENST00000588516 RRAGDQ9NQL2 400 aaPredicted RBP16.9■□□□□ 0.3
NEDD4L-223ENST00000588516 UTYO14607 1347 aa16.89■□□□□ 0.29
NEDD4L-223ENST00000588516 NEXNQ0ZGT2 675 aa16.89■□□□□ 0.29
NEDD4L-223ENST00000588516 NUTM1Q86Y26 1132 aa16.89■□□□□ 0.29
NEDD4L-223ENST00000588516 SLC16A10Q8TF71 515 aa16.89■□□□□ 0.29
NEDD4L-223ENST00000588516 DDX21Q9NR30 783 aaKnown RBP eCLIP16.89■□□□□ 0.29
NEDD4L-223ENST00000588516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.89■□□□□ 0.291e-13■□□□□ 9.1
NEDD4L-223ENST00000588516 ADCY9O60503 1353 aa16.88■□□□□ 0.29
NEDD4L-223ENST00000588516 G3BP1Q13283 466 aaKnown RBP eCLIP16.88■□□□□ 0.29
NEDD4L-223ENST00000588516 LRSAM1Q6UWE0 723 aa16.88■□□□□ 0.29
NEDD4L-223ENST00000588516 SH2B1Q9NRF2 756 aaPredicted RBP16.88■□□□□ 0.29
NEDD4L-223ENST00000588516 LIMCH1Q9UPQ0 1083 aa16.88■□□□□ 0.29
NEDD4L-223ENST00000588516 AXIN2Q9Y2T1 843 aa16.88■□□□□ 0.29
NEDD4L-223ENST00000588516 ZDHHC9Q9Y397 364 aa16.88■□□□□ 0.29
NEDD4L-223ENST00000588516 ADAMTS7Q9UKP4 1686 aa16.88■□□□□ 0.29
NEDD4L-223ENST00000588516 SIPA1L3O60292 1781 aaPredicted RBP16.87■□□□□ 0.29
NEDD4L-223ENST00000588516 NBPF7P0C2Y1 421 aaPredicted RBP16.87■□□□□ 0.29
NEDD4L-223ENST00000588516 YBX3P16989 372 aaKnown RBP eCLIP16.87■□□□□ 0.29
NEDD4L-223ENST00000588516 ZKSCAN1P17029 563 aaPredicted RBP16.87■□□□□ 0.29
NEDD4L-223ENST00000588516 ZNF526Q8TF50 670 aaPredicted RBP16.87■□□□□ 0.29
NEDD4L-223ENST00000588516 SPG7Q9UQ90 795 aa16.87■□□□□ 0.29
NEDD4L-223ENST00000588516 MAP3K2Q9Y2U5 619 aa16.87■□□□□ 0.29
NEDD4L-223ENST00000588516 PSMA5P28066 241 aa16.86■□□□□ 0.29
NEDD4L-223ENST00000588516 MCM5P33992 734 aa16.86■□□□□ 0.29
NEDD4L-223ENST00000588516 MPRIPQ6WCQ1 1025 aa16.86■□□□□ 0.29
NEDD4L-223ENST00000588516 TICAM2Q86XR7 235 aa16.86■□□□□ 0.29
NEDD4L-223ENST00000588516 RAPGEF4Q8WZA2 1011 aa16.86■□□□□ 0.29
NEDD4L-223ENST00000588516 CARD10Q9BWT7 1032 aa16.86■□□□□ 0.29
NEDD4L-223ENST00000588516 RGPD2P0DJD1 1756 aa16.85■□□□□ 0.29
NEDD4L-223ENST00000588516 GRM8O00222 908 aa16.85■□□□□ 0.29
NEDD4L-223ENST00000588516 MSNP26038 577 aaKnown RBP16.85■□□□□ 0.29
NEDD4L-223ENST00000588516 RNF20Q5VTR2 975 aa16.85■□□□□ 0.29
NEDD4L-223ENST00000588516 TSHZ3Q63HK5 1081 aa16.85■□□□□ 0.29
NEDD4L-223ENST00000588516 ZSCAN30Q86W11 494 aa16.85■□□□□ 0.29
NEDD4L-223ENST00000588516 FAM184AQ8NB25 1140 aa16.85■□□□□ 0.29
NEDD4L-223ENST00000588516 TMEM87AQ8NBN3 555 aa16.85■□□□□ 0.29
NEDD4L-223ENST00000588516 LSG1Q9H089 658 aaKnown RBP16.85■□□□□ 0.29
NEDD4L-223ENST00000588516 PALD1Q9ULE6 856 aa16.85■□□□□ 0.29
NEDD4L-223ENST00000588516 TATP17735 454 aaPredicted RBP16.84■□□□□ 0.29
NEDD4L-223ENST00000588516 ANKRD1Q15327 319 aa16.84■□□□□ 0.29
NEDD4L-223ENST00000588516 VPS53Q5VIR6 699 aa16.84■□□□□ 0.29
NEDD4L-223ENST00000588516 KCNB2Q92953 911 aa16.84■□□□□ 0.29
NEDD4L-223ENST00000588516 SNX14Q9Y5W7 946 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms