RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 NLRP10Q86W26 655 aa25.27■■□□□ 1.64
TPM4-208ENST00000588410 C7orf43Q8WVR3 580 aa25.27■■□□□ 1.64
TPM4-208ENST00000588410 RBM17Q96I25 401 aaKnown RBP25.27■■□□□ 1.64
TPM4-208ENST00000588410 NLRP3Q96P20 1036 aa25.27■■□□□ 1.64
TPM4-208ENST00000588410 RNF123Q5XPI4 1314 aa25.27■■□□□ 1.64
TPM4-208ENST00000588410 LTBP3Q9NS15 1303 aa25.27■■□□□ 1.64
TPM4-208ENST00000588410 FAM9BQ8IZU0 186 aa25.26■■□□□ 1.63
TPM4-208ENST00000588410 TSR2Q969E8 191 aaKnown RBP25.26■■□□□ 1.63
TPM4-208ENST00000588410 TRMT112Q9UI30 125 aaKnown RBP25.26■■□□□ 1.63
TPM4-208ENST00000588410 RIC1Q4ADV7 1423 aa25.26■■□□□ 1.63
TPM4-208ENST00000588410 GOLGA2Q08379 1002 aa25.25■■□□□ 1.63
TPM4-208ENST00000588410 CCDC30Q5VVM6 783 aa25.25■■□□□ 1.63
TPM4-208ENST00000588410 C16orf71Q8IYS4 520 aaPredicted RBP25.25■■□□□ 1.63
TPM4-208ENST00000588410 RTKN2Q8IZC4 609 aa25.25■■□□□ 1.63
TPM4-208ENST00000588410 SALL2Q9Y467 1007 aaPredicted RBP25.25■■□□□ 1.63
TPM4-208ENST00000588410 IL16Q14005 1332 aa25.24■■□□□ 1.63
TPM4-208ENST00000588410 SLC10A5Q5PT55 438 aa25.24■■□□□ 1.63
TPM4-208ENST00000588410 HOXA10P31260 410 aaPredicted RBP25.23■■□□□ 1.63
TPM4-208ENST00000588410 RIC3Q7Z5B4 369 aa25.23■■□□□ 1.63
TPM4-208ENST00000588410 SH3TC1Q8TE82 1336 aa25.22■■□□□ 1.63
TPM4-208ENST00000588410 GLTPD2A6NH11 291 aa25.22■■□□□ 1.63
TPM4-208ENST00000588410 FKBP4Q02790 459 aaKnown RBP eCLIP25.22■■□□□ 1.63
TPM4-208ENST00000588410 DPY19L2Q6NUT2 758 aa25.22■■□□□ 1.63
TPM4-208ENST00000588410 CRAMP1Q96RY5 1269 aa25.22■■□□□ 1.63
TPM4-208ENST00000588410 RRAGCQ9HB90 399 aa25.22■■□□□ 1.63
TPM4-208ENST00000588410 NUP98P52948 1817 aa25.21■■□□□ 1.63
TPM4-208ENST00000588410 TOMM70O94826 608 aa25.21■■□□□ 1.63
TPM4-208ENST00000588410 OLFM4Q6UX06 510 aa25.21■■□□□ 1.63
TPM4-208ENST00000588410 C3orf67Q6ZVT6 689 aa25.21■■□□□ 1.63
TPM4-208ENST00000588410 TSPYL6Q8N831 410 aa25.21■■□□□ 1.63
TPM4-208ENST00000588410 PHAXQ9H814 394 aaKnown RBP25.21■■□□□ 1.63
TPM4-208ENST00000588410 ATP5J2-PTCD1G3V325 749 aa25.2■■□□□ 1.62
TPM4-208ENST00000588410 HCLS1P14317 486 aaPredicted RBP25.2■■□□□ 1.62
TPM4-208ENST00000588410 CC2D2BQ6DHV5 1058 aa25.2■■□□□ 1.62
TPM4-208ENST00000588410 TMX4Q9H1E5 349 aaPredicted RBP25.2■■□□□ 1.62
TPM4-208ENST00000588410 DDX58O95786 925 aaKnown RBP25.19■■□□□ 1.62
TPM4-208ENST00000588410 WDR63Q8IWG1 891 aa25.19■■□□□ 1.62
TPM4-208ENST00000588410 ZNF428Q96B54 188 aa25.19■■□□□ 1.62
TPM4-208ENST00000588410 ISCA1Q9BUE6 129 aa25.19■■□□□ 1.62
TPM4-208ENST00000588410 STK31Q9BXU1 1019 aa25.19■■□□□ 1.62
TPM4-208ENST00000588410 SLX4Q8IY92 1834 aa25.19■■□□□ 1.62
TPM4-208ENST00000588410 PPEF1O14829 653 aaPredicted RBP25.18■■□□□ 1.62
TPM4-208ENST00000588410 TWISTNBQ3B726 338 aaPredicted RBP25.18■■□□□ 1.62
TPM4-208ENST00000588410 TNRC6CQ9HCJ0 1690 aaKnown RBP25.17■■□□□ 1.62
TPM4-208ENST00000588410 TCERG1O14776 1098 aaKnown RBP25.17■■□□□ 1.62
TPM4-208ENST00000588410 GRIPAP1Q4V328 841 aa25.17■■□□□ 1.62
TPM4-208ENST00000588410 SYNE4Q8N205 404 aa25.17■■□□□ 1.62
TPM4-208ENST00000588410 ZNF277Q9NRM2 450 aaPredicted RBP25.17■■□□□ 1.62
TPM4-208ENST00000588410 VEGFAP15692 232 aaPredicted RBP25.15■■□□□ 1.62
TPM4-208ENST00000588410 TRIM28Q13263 835 aaKnown RBP25.15■■□□□ 1.62
TPM4-208ENST00000588410 DDX46Q7L014 1031 aaKnown RBP25.15■■□□□ 1.62
TPM4-208ENST00000588410 RBM46Q8TBY0 533 aaKnown RBP25.15■■□□□ 1.62
TPM4-208ENST00000588410 FAM89AQ96GI7 184 aa25.14■■□□□ 1.62
TPM4-208ENST00000588410 PSMD1Q99460 953 aa25.14■■□□□ 1.62
TPM4-208ENST00000588410 MYD88Q99836 296 aa25.14■■□□□ 1.62
TPM4-208ENST00000588410 FANCIQ9NVI1 1328 aa25.13■■□□□ 1.61
TPM4-208ENST00000588410 HSPA6P17066 643 aa25.13■■□□□ 1.61
TPM4-208ENST00000588410 ABCC4O15439 1325 aa25.12■■□□□ 1.61
TPM4-208ENST00000588410 BBOX1O75936 387 aa25.12■■□□□ 1.61
TPM4-208ENST00000588410 IARSP41252 1262 aaKnown RBP25.12■■□□□ 1.61
TPM4-208ENST00000588410 RTL5Q5HYW3 569 aaPredicted RBP25.12■■□□□ 1.61
TPM4-208ENST00000588410 SBF1O95248 1867 aa25.11■■□□□ 1.61
TPM4-208ENST00000588410 ARFGEF2Q9Y6D5 1785 aa25.11■■□□□ 1.61
TPM4-208ENST00000588410 ATP6V0A2Q9Y487 856 aa25.11■■□□□ 1.61
TPM4-208ENST00000588410 SLC4A2P04920 1241 aa25.1■■□□□ 1.61
TPM4-208ENST00000588410 HSP90B1P14625 803 aaKnown RBP25.1■■□□□ 1.61
TPM4-208ENST00000588410 JDP2Q8WYK2 163 aa25.1■■□□□ 1.61
TPM4-208ENST00000588410 METTL22Q9BUU2 404 aaPredicted RBP25.1■■□□□ 1.61
TPM4-208ENST00000588410 MYH16Q9H6N6 1097 aa25.1■■□□□ 1.61
TPM4-208ENST00000588410 MAP3K2Q9Y2U5 619 aa25.1■■□□□ 1.61
TPM4-208ENST00000588410 FER1L6Q2WGJ9 1857 aa25.09■■□□□ 1.61
TPM4-208ENST00000588410 IRS4O14654 1257 aaPredicted RBP25.09■■□□□ 1.61
TPM4-208ENST00000588410 DDNO94850 711 aaPredicted RBP25.09■■□□□ 1.61
TPM4-208ENST00000588410 GRAPQ13588 217 aa25.09■■□□□ 1.61
TPM4-208ENST00000588410 KSR2Q6VAB6 950 aa25.09■■□□□ 1.61
TPM4-208ENST00000588410 ZBTB38Q8NAP3 1195 aaPredicted RBP25.09■■□□□ 1.61
TPM4-208ENST00000588410 CCDC191Q8NCU4 936 aa25.09■■□□□ 1.61
TPM4-208ENST00000588410 GRAPLQ8TC17 118 aaPredicted RBP25.09■■□□□ 1.61
TPM4-208ENST00000588410 FSTL1Q12841 308 aa25.08■■□□□ 1.61
TPM4-208ENST00000588410 CWC25Q9NXE8 425 aaPredicted RBP25.08■■□□□ 1.61
TPM4-208ENST00000588410 PI4KAP2A4QPH2 592 aa25.07■■□□□ 1.6
TPM4-208ENST00000588410 EXOSC9Q06265 439 aaKnown RBP25.07■■□□□ 1.6
TPM4-208ENST00000588410 NEXNQ0ZGT2 675 aa25.07■■□□□ 1.6
TPM4-208ENST00000588410 SF3B3Q15393 1217 aaKnown RBP25.07■■□□□ 1.6
TPM4-208ENST00000588410 PI4KAP1Q8N8J0 262 aa25.07■■□□□ 1.6
TPM4-208ENST00000588410 SMC1BQ8NDV3 1235 aa25.07■■□□□ 1.6
TPM4-208ENST00000588410 TMC4Q7Z404 712 aa25.06■■□□□ 1.6
TPM4-208ENST00000588410 SP8Q8IXZ3 490 aa25.06■■□□□ 1.6
TPM4-208ENST00000588410 LARGE2Q8N3Y3 721 aa25.06■■□□□ 1.6
TPM4-208ENST00000588410 CACNA1SQ13698 1873 aa25.06■■□□□ 1.6
TPM4-208ENST00000588410 TIAM2Q8IVF5 1701 aa25.06■■□□□ 1.6
TPM4-208ENST00000588410 ANKRD36CQ5JPF3 1778 aa25.05■■□□□ 1.6
TPM4-208ENST00000588410 PCCAP05165 728 aaPredicted RBP25.05■■□□□ 1.6
TPM4-208ENST00000588410 SLC51AQ86UW1 340 aa25.05■■□□□ 1.6
TPM4-208ENST00000588410 SUPT20HQ8NEM7 779 aa25.05■■□□□ 1.6
TPM4-208ENST00000588410 SNED1Q8TER0 1413 aa25.04■■□□□ 1.6
TPM4-208ENST00000588410 POTECB2RU33 542 aa25.04■■□□□ 1.6
TPM4-208ENST00000588410 VAMP4O75379 141 aa25.04■■□□□ 1.6
TPM4-208ENST00000588410 DPP8Q6V1X1 898 aaPredicted RBP25.04■■□□□ 1.6
TPM4-208ENST00000588410 SPINK5Q9NQ38 1064 aaPredicted RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms