RNA–Protein interactions for RNA: ENST00000587881.1

NEDD4L-220, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-220ENST00000587881 CCDC83Q8IWF9 413 aa17.19■□□□□ 0.34
NEDD4L-220ENST00000587881 TRPM3Q9HCF6 1732 aaPredicted RBP17.19■□□□□ 0.34
NEDD4L-220ENST00000587881 RGPD5Q99666 1765 aa17.19■□□□□ 0.34
NEDD4L-220ENST00000587881 KCNJ4P48050 445 aa17.19■□□□□ 0.34
NEDD4L-220ENST00000587881 RBM8AQ9Y5S9 174 aaKnown RBP17.19■□□□□ 0.34
NEDD4L-220ENST00000587881 LARGE1O95461 756 aa17.18■□□□□ 0.34
NEDD4L-220ENST00000587881 IGKV5-2P06315 115 aa17.18■□□□□ 0.34
NEDD4L-220ENST00000587881 NMIQ13287 307 aaPredicted RBP17.18■□□□□ 0.34
NEDD4L-220ENST00000587881 CCDC8Q9H0W5 538 aaPredicted RBP17.18■□□□□ 0.34
NEDD4L-220ENST00000587881 NPHP4O75161 1426 aaPredicted RBP17.18■□□□□ 0.34
NEDD4L-220ENST00000587881 RAPGEF4Q8WZA2 1011 aa17.17■□□□□ 0.34
NEDD4L-220ENST00000587881 SLC52A2Q9HAB3 445 aa17.17■□□□□ 0.34
NEDD4L-220ENST00000587881 SCN11AQ9UI33 1791 aa17.17■□□□□ 0.34
NEDD4L-220ENST00000587881 NEURL1BA8MQ27 555 aa17.17■□□□□ 0.34
NEDD4L-220ENST00000587881 RNF20Q5VTR2 975 aa17.17■□□□□ 0.34
NEDD4L-220ENST00000587881 FAM227BQ96M60 508 aa17.17■□□□□ 0.34
NEDD4L-220ENST00000587881 ALDH8A1Q9H2A2 487 aaPredicted RBP17.17■□□□□ 0.34
NEDD4L-220ENST00000587881 MTMR6Q9Y217 621 aa17.17■□□□□ 0.34
NEDD4L-220ENST00000587881 ERBB3P21860 1342 aa17.16■□□□□ 0.34
NEDD4L-220ENST00000587881 MST1RQ04912 1400 aa17.16■□□□□ 0.34
NEDD4L-220ENST00000587881 RRP9O43818 475 aaKnown RBP17.16■□□□□ 0.34
NEDD4L-220ENST00000587881 GCKRQ14397 625 aa17.16■□□□□ 0.34
NEDD4L-220ENST00000587881 ANKRD1Q15327 319 aa17.16■□□□□ 0.34
NEDD4L-220ENST00000587881 METTL22Q9BUU2 404 aaPredicted RBP17.16■□□□□ 0.34
NEDD4L-220ENST00000587881 SLC27A2O14975 620 aa17.15■□□□□ 0.34
NEDD4L-220ENST00000587881 ME3Q16798 604 aa17.15■□□□□ 0.34
NEDD4L-220ENST00000587881 FSD1Q9BTV5 496 aa17.15■□□□□ 0.34
NEDD4L-220ENST00000587881 BOLA2Q9H3K6 86 aa17.15■□□□□ 0.34
NEDD4L-220ENST00000587881 KIF1AQ12756 1690 aa17.15■□□□□ 0.34
NEDD4L-220ENST00000587881 TATP17735 454 aaPredicted RBP17.15■□□□□ 0.34
NEDD4L-220ENST00000587881 SLC39A6Q13433 755 aa17.15■□□□□ 0.34
NEDD4L-220ENST00000587881 XAGE3Q8WTP9 111 aa17.15■□□□□ 0.34
NEDD4L-220ENST00000587881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.15■□□□□ 0.349e-8■■□□□ 11.7
NEDD4L-220ENST00000587881 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.15■□□□□ 0.34
NEDD4L-220ENST00000587881 NPHP3Q7Z494 1330 aa17.15■□□□□ 0.34
NEDD4L-220ENST00000587881 FIBPO43427 364 aa17.14■□□□□ 0.33
NEDD4L-220ENST00000587881 PTMAP06454 111 aaKnown RBP17.14■□□□□ 0.33
NEDD4L-220ENST00000587881 MYL6BP14649 208 aa17.14■□□□□ 0.33
NEDD4L-220ENST00000587881 COPS6Q7L5N1 327 aa17.14■□□□□ 0.33
NEDD4L-220ENST00000587881 SIL1Q9H173 461 aa17.14■□□□□ 0.33
NEDD4L-220ENST00000587881 MRC1P22897 1456 aa17.14■□□□□ 0.33
NEDD4L-220ENST00000587881 PDCP20941 246 aa17.13■□□□□ 0.33
NEDD4L-220ENST00000587881 HSP90AA2PQ14568 343 aaPredicted RBP17.13■□□□□ 0.33
NEDD4L-220ENST00000587881 TSGA10IPQ3SY00 556 aa17.13■□□□□ 0.33
NEDD4L-220ENST00000587881 NFATC2IPQ8NCF5 419 aa17.13■□□□□ 0.33
NEDD4L-220ENST00000587881 COPRSQ9NQ92 184 aa17.13■□□□□ 0.33
NEDD4L-220ENST00000587881 TLR7Q9NYK1 1049 aaKnown RBP17.13■□□□□ 0.33
NEDD4L-220ENST00000587881 HMG20BQ9P0W2 317 aa17.13■□□□□ 0.33
NEDD4L-220ENST00000587881 TPCN1Q9ULQ1 816 aa17.13■□□□□ 0.33
NEDD4L-220ENST00000587881 C5P01031 1676 aa17.13■□□□□ 0.33
NEDD4L-220ENST00000587881 PHKG2P15735 406 aa17.13■□□□□ 0.33
NEDD4L-220ENST00000587881 DNM1Q05193 864 aaKnown RBP17.13■□□□□ 0.33
NEDD4L-220ENST00000587881 BLOC1S2Q6QNY1 142 aa17.13■□□□□ 0.33
NEDD4L-220ENST00000587881 ANKRD13DQ6ZTN6 518 aa17.13■□□□□ 0.33
NEDD4L-220ENST00000587881 PROSER2Q86WR7 435 aaPredicted RBP17.13■□□□□ 0.33
NEDD4L-220ENST00000587881 MYD88Q99836 296 aa17.13■□□□□ 0.33
NEDD4L-220ENST00000587881 A0A0D9SFI3 127 aa17.12■□□□□ 0.33
NEDD4L-220ENST00000587881 ZC3H6P61129 1189 aaKnown RBP17.12■□□□□ 0.33
NEDD4L-220ENST00000587881 ST3GAL1Q11201 340 aa17.12■□□□□ 0.33
NEDD4L-220ENST00000587881 C1orf167Q5SNV9 1468 aa17.12■□□□□ 0.33
NEDD4L-220ENST00000587881 LARP1BQ659C4 914 aaKnown RBP17.12■□□□□ 0.33
NEDD4L-220ENST00000587881 NLRP2Q9NX02 1062 aa17.12■□□□□ 0.33
NEDD4L-220ENST00000587881 MED23Q9ULK4 1368 aa17.12■□□□□ 0.33
NEDD4L-220ENST00000587881 KDM6AO15550 1401 aaPredicted RBP17.11■□□□□ 0.33
NEDD4L-220ENST00000587881 IFNL2Q8IZJ0 200 aa17.11■□□□□ 0.33
NEDD4L-220ENST00000587881 NECAB1Q8N987 351 aa17.11■□□□□ 0.33
NEDD4L-220ENST00000587881 VPS37CA5D8V6 355 aaPredicted RBP17.11■□□□□ 0.33
NEDD4L-220ENST00000587881 SNRPA1P09661 255 aaKnown RBP17.11■□□□□ 0.33
NEDD4L-220ENST00000587881 ATP5JP18859 108 aa17.11■□□□□ 0.33
NEDD4L-220ENST00000587881 TRHP20396 242 aaPredicted RBP17.11■□□□□ 0.33
NEDD4L-220ENST00000587881 RPS6KB1P23443 525 aa17.11■□□□□ 0.33
NEDD4L-220ENST00000587881 EPHA10Q5JZY3 1008 aa17.11■□□□□ 0.33
NEDD4L-220ENST00000587881 KLHDC4Q8TBB5 520 aa17.11■□□□□ 0.33
NEDD4L-220ENST00000587881 DDX54Q8TDD1 881 aaKnown RBP17.11■□□□□ 0.33
NEDD4L-220ENST00000587881 C19orf44Q9H6X5 657 aa17.11■□□□□ 0.33
NEDD4L-220ENST00000587881 PLEKHG2Q9H7P9 1386 aa17.1■□□□□ 0.33
NEDD4L-220ENST00000587881 JCADQ9P266 1359 aa17.1■□□□□ 0.33
NEDD4L-220ENST00000587881 ZNF496Q96IT1 587 aaPredicted RBP17.1■□□□□ 0.33
NEDD4L-220ENST00000587881 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
NEDD4L-220ENST00000587881 COL15A1P39059 1388 aa17.1■□□□□ 0.33
NEDD4L-220ENST00000587881 KRT32Q14532 448 aa17.09■□□□□ 0.33
NEDD4L-220ENST00000587881 TTC5Q8N0Z6 440 aa17.09■□□□□ 0.33
NEDD4L-220ENST00000587881 R3HCC1Q9Y3T6 440 aaKnown RBP17.09■□□□□ 0.33
NEDD4L-220ENST00000587881 ABCC6O95255 1503 aa17.09■□□□□ 0.33
NEDD4L-220ENST00000587881 RFX5P48382 616 aaPredicted RBP17.09■□□□□ 0.33
NEDD4L-220ENST00000587881 KRT85P78386 507 aa17.09■□□□□ 0.33
NEDD4L-220ENST00000587881 USPL1Q5W0Q7 1092 aa17.09■□□□□ 0.33
NEDD4L-220ENST00000587881 LRP10Q7Z4F1 713 aa17.09■□□□□ 0.33
NEDD4L-220ENST00000587881 DCAF5Q96JK2 942 aa17.09■□□□□ 0.33
NEDD4L-220ENST00000587881 FUCA2Q9BTY2 467 aa17.09■□□□□ 0.33
NEDD4L-220ENST00000587881 TAF5LO75529 589 aa17.08■□□□□ 0.33
NEDD4L-220ENST00000587881 HCLS1P14317 486 aaPredicted RBP17.08■□□□□ 0.33
NEDD4L-220ENST00000587881 RABL6Q3YEC7 729 aaPredicted RBP17.08■□□□□ 0.33
NEDD4L-220ENST00000587881 TPRNQ4KMQ1 711 aa17.08■□□□□ 0.33
NEDD4L-220ENST00000587881 TNNI3KQ59H18 835 aa17.08■□□□□ 0.33
NEDD4L-220ENST00000587881 USP16Q9Y5T5 823 aa17.08■□□□□ 0.33
NEDD4L-220ENST00000587881 FPGT-TNNI3KV9GXZ4 949 aa17.08■□□□□ 0.33
NEDD4L-220ENST00000587881 AFDNP55196 1824 aaKnown RBP17.08■□□□□ 0.32
NEDD4L-220ENST00000587881 RFX7Q2KHR2 1363 aa17.08■□□□□ 0.32
NEDD4L-220ENST00000587881 ELP1O95163 1332 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 281.2 ms