RNA–Protein interactions for RNA: ENST00000587135.1

HDAC5-205, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-205ENST00000587135 C7orf43Q8WVR3 580 aa25.12■■□□□ 1.61
HDAC5-205ENST00000587135 C21orf2O43822 256 aa25.11■■□□□ 1.61
HDAC5-205ENST00000587135 EXOSC9Q06265 439 aaKnown RBP25.11■■□□□ 1.61
HDAC5-205ENST00000587135 PRPF40BQ6NWY9 871 aaKnown RBP25.11■■□□□ 1.61
HDAC5-205ENST00000587135 RNF123Q5XPI4 1314 aa25.11■■□□□ 1.61
HDAC5-205ENST00000587135 DIEXFQ68CQ4 756 aaKnown RBP25.1■■□□□ 1.61
HDAC5-205ENST00000587135 HOXA10P31260 410 aaPredicted RBP25.09■■□□□ 1.61
HDAC5-205ENST00000587135 PRELPP51888 382 aa25.09■■□□□ 1.61
HDAC5-205ENST00000587135 C9orf131Q5VYM1 1079 aa25.09■■□□□ 1.61
HDAC5-205ENST00000587135 C3orf67Q6ZVT6 689 aa25.09■■□□□ 1.61
HDAC5-205ENST00000587135 MYH16Q9H6N6 1097 aa25.09■■□□□ 1.61
HDAC5-205ENST00000587135 ATP5J2-PTCD1G3V325 749 aa25.08■■□□□ 1.61
HDAC5-205ENST00000587135 NFKBIEO00221 500 aa25.08■■□□□ 1.61
HDAC5-205ENST00000587135 TCERG1O14776 1098 aaKnown RBP25.08■■□□□ 1.61
HDAC5-205ENST00000587135 ALDH1B1P30837 517 aa25.08■■□□□ 1.61
HDAC5-205ENST00000587135 RIC3Q7Z5B4 369 aa25.08■■□□□ 1.61
HDAC5-205ENST00000587135 SYNE4Q8N205 404 aa25.08■■□□□ 1.61
HDAC5-205ENST00000587135 SLC4A2P04920 1241 aa25.07■■□□□ 1.6
HDAC5-205ENST00000587135 STK31Q9BXU1 1019 aa25.07■■□□□ 1.6
HDAC5-205ENST00000587135 ZNF219Q9P2Y4 722 aaPredicted RBP25.07■■□□□ 1.6
HDAC5-205ENST00000587135 TRMT112Q9UI30 125 aaKnown RBP25.07■■□□□ 1.6
HDAC5-205ENST00000587135 RASSF7Q02833 373 aa25.06■■□□□ 1.6
HDAC5-205ENST00000587135 NLRP3Q96P20 1036 aa25.06■■□□□ 1.6
HDAC5-205ENST00000587135 SLX4Q8IY92 1834 aa25.06■■□□□ 1.6
HDAC5-205ENST00000587135 TNRC6CQ9HCJ0 1690 aaKnown RBP25.05■■□□□ 1.6
HDAC5-205ENST00000587135 DDX58O95786 925 aaKnown RBP25.05■■□□□ 1.6
HDAC5-205ENST00000587135 G2E3Q7L622 706 aa25.05■■□□□ 1.6
HDAC5-205ENST00000587135 MIER1Q8N108 512 aa25.05■■□□□ 1.6
HDAC5-205ENST00000587135 SH3TC1Q8TE82 1336 aa25.05■■□□□ 1.6
HDAC5-205ENST00000587135 SOGA3Q5TF21 947 aa25.04■■□□□ 1.6
HDAC5-205ENST00000587135 KSR2Q6VAB6 950 aa25.04■■□□□ 1.6
HDAC5-205ENST00000587135 CRAMP1Q96RY5 1269 aa25.04■■□□□ 1.6
HDAC5-205ENST00000587135 METTL22Q9BUU2 404 aaPredicted RBP25.04■■□□□ 1.6
HDAC5-205ENST00000587135 RNF181Q9P0P0 153 aa25.04■■□□□ 1.6
HDAC5-205ENST00000587135 ANKRD36CQ5JPF3 1778 aa25.03■■□□□ 1.6
HDAC5-205ENST00000587135 HCLS1P14317 486 aaPredicted RBP25.03■■□□□ 1.6
HDAC5-205ENST00000587135 LMNB1P20700 586 aa25.03■■□□□ 1.6
HDAC5-205ENST00000587135 PI4KAP2A4QPH2 592 aa25.02■■□□□ 1.6
HDAC5-205ENST00000587135 PI4KAP1Q8N8J0 262 aa25.02■■□□□ 1.6
HDAC5-205ENST00000587135 RPGRQ92834 1020 aaKnown RBP25.02■■□□□ 1.6
HDAC5-205ENST00000587135 ZNF428Q96B54 188 aa25.02■■□□□ 1.6
HDAC5-205ENST00000587135 FAM89AQ96GI7 184 aa25.02■■□□□ 1.6
HDAC5-205ENST00000587135 RBM17Q96I25 401 aaKnown RBP25.02■■□□□ 1.6
HDAC5-205ENST00000587135 MYD88Q99836 296 aa25.02■■□□□ 1.6
HDAC5-205ENST00000587135 LTBP3Q9NS15 1303 aa25.02■■□□□ 1.6
HDAC5-205ENST00000587135 CCDC191Q8NCU4 936 aa25.01■■□□□ 1.59
HDAC5-205ENST00000587135 MAP3K2Q9Y2U5 619 aa25.01■■□□□ 1.59
HDAC5-205ENST00000587135 OLFM4Q6UX06 510 aa25■■□□□ 1.59
HDAC5-205ENST00000587135 ARFGEF2Q9Y6D5 1785 aa25■■□□□ 1.59
HDAC5-205ENST00000587135 SBF1O95248 1867 aa24.99■■□□□ 1.59
HDAC5-205ENST00000587135 SLFN5Q08AF3 891 aa24.99■■□□□ 1.59
HDAC5-205ENST00000587135 CCDC93Q567U6 631 aa24.99■■□□□ 1.59
HDAC5-205ENST00000587135 ZBTB38Q8NAP3 1195 aaPredicted RBP24.99■■□□□ 1.59
HDAC5-205ENST00000587135 GPBP1L1Q9HC44 474 aaPredicted RBP24.99■■□□□ 1.59
HDAC5-205ENST00000587135 E9PSI1 815 aa24.98■■□□□ 1.59
HDAC5-205ENST00000587135 FLIIQ13045 1269 aa24.98■■□□□ 1.59
HDAC5-205ENST00000587135 ZNF526Q8TF50 670 aaPredicted RBP24.98■■□□□ 1.59
HDAC5-205ENST00000587135 TAOK3Q9H2K8 898 aa24.98■■□□□ 1.59
HDAC5-205ENST00000587135 IGKV5-2P06315 115 aa24.97■■□□□ 1.59
HDAC5-205ENST00000587135 TRMT2AQ8IZ69 625 aaKnown RBP24.97■■□□□ 1.59
HDAC5-205ENST00000587135 RTKN2Q8IZC4 609 aa24.97■■□□□ 1.59
HDAC5-205ENST00000587135 SNED1Q8TER0 1413 aa24.96■■□□□ 1.59
HDAC5-205ENST00000587135 FER1L6Q2WGJ9 1857 aa24.96■■□□□ 1.59
HDAC5-205ENST00000587135 ZC3H4Q9UPT8 1303 aaKnown RBP24.96■■□□□ 1.59
HDAC5-205ENST00000587135 SF3B3Q15393 1217 aaKnown RBP24.96■■□□□ 1.59
HDAC5-205ENST00000587135 CWC25Q9NXE8 425 aaPredicted RBP24.96■■□□□ 1.59
HDAC5-205ENST00000587135 IRS4O14654 1257 aaPredicted RBP24.95■■□□□ 1.58
HDAC5-205ENST00000587135 PCCAP05165 728 aaPredicted RBP24.95■■□□□ 1.58
HDAC5-205ENST00000587135 FKBP4Q02790 459 aaKnown RBP eCLIP24.95■■□□□ 1.58
HDAC5-205ENST00000587135 CC2D2BQ6DHV5 1058 aa24.95■■□□□ 1.58
HDAC5-205ENST00000587135 CDCA7LQ96GN5 454 aa24.95■■□□□ 1.58
HDAC5-205ENST00000587135 ABCC4O15439 1325 aa24.94■■□□□ 1.58
HDAC5-205ENST00000587135 RTL5Q5HYW3 569 aaPredicted RBP24.94■■□□□ 1.58
HDAC5-205ENST00000587135 PPEF1O14829 653 aaPredicted RBP24.93■■□□□ 1.58
HDAC5-205ENST00000587135 BBOX1O75936 387 aa24.93■■□□□ 1.58
HDAC5-205ENST00000587135 FKBP5Q13451 457 aaPredicted RBP24.92■■□□□ 1.58
HDAC5-205ENST00000587135 GRIPAP1Q4V328 841 aa24.92■■□□□ 1.58
HDAC5-205ENST00000587135 DDX46Q7L014 1031 aaKnown RBP24.92■■□□□ 1.58
HDAC5-205ENST00000587135 SLC51AQ86UW1 340 aa24.92■■□□□ 1.58
HDAC5-205ENST00000587135 PSMD1Q99460 953 aa24.92■■□□□ 1.58
HDAC5-205ENST00000587135 ATP6V0A2Q9Y487 856 aa24.92■■□□□ 1.58
HDAC5-205ENST00000587135 CACNA1SQ13698 1873 aa24.92■■□□□ 1.58
HDAC5-205ENST00000587135 NEURL1BA8MQ27 555 aa24.91■■□□□ 1.58
HDAC5-205ENST00000587135 KIF3CO14782 793 aa24.91■■□□□ 1.58
HDAC5-205ENST00000587135 NEXNQ0ZGT2 675 aa24.91■■□□□ 1.58
HDAC5-205ENST00000587135 GRAPQ13588 217 aa24.9■■□□□ 1.58
HDAC5-205ENST00000587135 CWF19L2Q2TBE0 894 aaKnown RBP24.9■■□□□ 1.58
HDAC5-205ENST00000587135 GRAPLQ8TC17 118 aaPredicted RBP24.9■■□□□ 1.58
HDAC5-205ENST00000587135 DNAAF4Q8WXU2 420 aa24.9■■□□□ 1.58
HDAC5-205ENST00000587135 JARID2Q92833 1246 aaPredicted RBP24.9■■□□□ 1.58
HDAC5-205ENST00000587135 GLTPD2A6NH11 291 aa24.89■■□□□ 1.58
HDAC5-205ENST00000587135 C1QTNF8P60827 252 aa24.89■■□□□ 1.58
HDAC5-205ENST00000587135 SP8Q8IXZ3 490 aa24.89■■□□□ 1.58
HDAC5-205ENST00000587135 ZNF277Q9NRM2 450 aaPredicted RBP24.89■■□□□ 1.58
HDAC5-205ENST00000587135 DDX60Q8IY21 1712 aaKnown RBP24.89■■□□□ 1.57
HDAC5-205ENST00000587135 KDM2BQ8NHM5 1336 aa24.88■■□□□ 1.57
HDAC5-205ENST00000587135 H7C1W4 665 aa24.88■■□□□ 1.57
HDAC5-205ENST00000587135 HSP90B1P14625 803 aaKnown RBP24.88■■□□□ 1.57
HDAC5-205ENST00000587135 NMRK2Q9NPI5 230 aa24.88■■□□□ 1.57
HDAC5-205ENST00000587135 LAMB2P55268 1798 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms