RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 CALD1Q05682 793 aaKnown RBP22.09■■□□□ 1.13
TRIM47-203ENST00000586495 KRT24Q2M2I5 525 aa22.09■■□□□ 1.13
TRIM47-203ENST00000586495 HDGFL1Q5TGJ6 251 aa22.09■■□□□ 1.13
TRIM47-203ENST00000586495 UTP14AQ9BVJ6 771 aaKnown RBP22.09■■□□□ 1.13
TRIM47-203ENST00000586495 APAF1O14727 1248 aa22.08■■□□□ 1.13
TRIM47-203ENST00000586495 HOXA10P31260 410 aaPredicted RBP22.08■■□□□ 1.13
TRIM47-203ENST00000586495 CC2D2BQ6DHV5 1058 aa22.08■■□□□ 1.13
TRIM47-203ENST00000586495 RBM17Q96I25 401 aaKnown RBP22.08■■□□□ 1.13
TRIM47-203ENST00000586495 NLRP3Q96P20 1036 aa22.08■■□□□ 1.13
TRIM47-203ENST00000586495 RNF123Q5XPI4 1314 aa22.07■■□□□ 1.12
TRIM47-203ENST00000586495 GRIPAP1Q4V328 841 aa22.06■■□□□ 1.12
TRIM47-203ENST00000586495 CRAMP1Q96RY5 1269 aa22.06■■□□□ 1.12
TRIM47-203ENST00000586495 CHPF2Q9P2E5 772 aa22.06■■□□□ 1.12
TRIM47-203ENST00000586495 DBF4Q9UBU7 674 aaPredicted RBP22.06■■□□□ 1.12
TRIM47-203ENST00000586495 POTECB2RU33 542 aa22.05■■□□□ 1.12
TRIM47-203ENST00000586495 DDNO94850 711 aaPredicted RBP22.05■■□□□ 1.12
TRIM47-203ENST00000586495 TCIRG1Q13488 830 aa22.05■■□□□ 1.12
TRIM47-203ENST00000586495 SLC10A5Q5PT55 438 aa22.05■■□□□ 1.12
TRIM47-203ENST00000586495 OLFM4Q6UX06 510 aa22.05■■□□□ 1.12
TRIM47-203ENST00000586495 ZNF277Q9NRM2 450 aaPredicted RBP22.05■■□□□ 1.12
TRIM47-203ENST00000586495 MBIPQ9NS73 344 aa22.05■■□□□ 1.12
TRIM47-203ENST00000586495 WDR90Q96KV7 1748 aa22.05■■□□□ 1.12
TRIM47-203ENST00000586495 CEP350Q5VT06 3117 aa22.04■■□□□ 1.12
TRIM47-203ENST00000586495 GNAI1P63096 354 aa22.04■■□□□ 1.12
TRIM47-203ENST00000586495 DUSP27Q5VZP5 1158 aa22.04■■□□□ 1.12
TRIM47-203ENST00000586495 SYNE4Q8N205 404 aa22.04■■□□□ 1.12
TRIM47-203ENST00000586495 PSMD1Q99460 953 aa22.04■■□□□ 1.12
TRIM47-203ENST00000586495 IFT57Q9NWB7 429 aa22.04■■□□□ 1.12
TRIM47-203ENST00000586495 ZNF853P0CG23 659 aa22.03■■□□□ 1.12
TRIM47-203ENST00000586495 IARSP41252 1262 aaKnown RBP22.03■■□□□ 1.12
TRIM47-203ENST00000586495 NLRP10Q86W26 655 aa22.03■■□□□ 1.12
TRIM47-203ENST00000586495 TMX4Q9H1E5 349 aaPredicted RBP22.03■■□□□ 1.12
TRIM47-203ENST00000586495 HYPKQ9NX55 129 aa22.03■■□□□ 1.12
TRIM47-203ENST00000586495 IQCA1LA6NCM1 817 aa22.02■■□□□ 1.12
TRIM47-203ENST00000586495 PLBD2Q8NHP8 589 aa22.02■■□□□ 1.12
TRIM47-203ENST00000586495 PPEF1O14829 653 aaPredicted RBP22.01■■□□□ 1.11
TRIM47-203ENST00000586495 ANKRD13DQ6ZTN6 518 aa22.01■■□□□ 1.11
TRIM47-203ENST00000586495 TRMT112Q9UI30 125 aaKnown RBP22.01■■□□□ 1.11
TRIM47-203ENST00000586495 C3orf67Q6ZVT6 689 aa22■■□□□ 1.11
TRIM47-203ENST00000586495 DNAJC5GQ8N7S2 189 aa22■■□□□ 1.11
TRIM47-203ENST00000586495 JDP2Q8WYK2 163 aa22■■□□□ 1.11
TRIM47-203ENST00000586495 SH3TC1Q8TE82 1336 aa22■■□□□ 1.11
TRIM47-203ENST00000586495 L3MBTL3Q96JM7 780 aaPredicted RBP21.99■■□□□ 1.11
TRIM47-203ENST00000586495 CHMP4AQ9BY43 222 aa21.99■■□□□ 1.11
TRIM47-203ENST00000586495 SNED1Q8TER0 1413 aa21.98■■□□□ 1.11
TRIM47-203ENST00000586495 ANKRD36CQ5JPF3 1778 aa21.98■■□□□ 1.11
TRIM47-203ENST00000586495 FZD9O00144 591 aa21.98■■□□□ 1.11
TRIM47-203ENST00000586495 TCERG1O14776 1098 aaKnown RBP21.98■■□□□ 1.11
TRIM47-203ENST00000586495 ZNF316A6NFI3 1004 aaPredicted RBP21.97■■□□□ 1.11
TRIM47-203ENST00000586495 HCLS1P14317 486 aaPredicted RBP21.97■■□□□ 1.11
TRIM47-203ENST00000586495 BBOX1O75936 387 aa21.96■■□□□ 1.11
TRIM47-203ENST00000586495 HTRA3P83110 453 aa21.96■■□□□ 1.11
TRIM47-203ENST00000586495 CHADLQ6NUI6 762 aa21.96■■□□□ 1.11
TRIM47-203ENST00000586495 ATP6V0A2Q9Y487 856 aa21.96■■□□□ 1.11
TRIM47-203ENST00000586495 ZNF541Q9H0D2 1346 aa21.96■■□□□ 1.11
TRIM47-203ENST00000586495 ELL2O00472 640 aaPredicted RBP21.95■■□□□ 1.1
TRIM47-203ENST00000586495 ANP32CO43423 234 aa21.95■■□□□ 1.1
TRIM47-203ENST00000586495 CCDC184Q52MB2 194 aa21.95■■□□□ 1.1
TRIM47-203ENST00000586495 DDX46Q7L014 1031 aaKnown RBP21.95■■□□□ 1.1
TRIM47-203ENST00000586495 LARGE2Q8N3Y3 721 aa21.95■■□□□ 1.1
TRIM47-203ENST00000586495 KLRG1Q96E93 195 aa21.95■■□□□ 1.1
TRIM47-203ENST00000586495 ISCA1Q9BUE6 129 aa21.95■■□□□ 1.1
TRIM47-203ENST00000586495 ABCC4O15439 1325 aa21.95■■□□□ 1.1
TRIM47-203ENST00000586495 EIF6P56537 245 aaKnown RBP21.94■■□□□ 1.1
TRIM47-203ENST00000586495 GOLGA2Q08379 1002 aa21.94■■□□□ 1.1
TRIM47-203ENST00000586495 RIC3Q7Z5B4 369 aa21.94■■□□□ 1.1
TRIM47-203ENST00000586495 VPS33BQ9H267 617 aa21.94■■□□□ 1.1
TRIM47-203ENST00000586495 TAF1DQ9H5J8 278 aaPredicted RBP21.94■■□□□ 1.1
TRIM47-203ENST00000586495 HACL1Q9UJ83 578 aa21.94■■□□□ 1.1
TRIM47-203ENST00000586495 SCN4AP35499 1836 aa21.93■■□□□ 1.1
TRIM47-203ENST00000586495 CCDC27Q2M243 656 aa21.93■■□□□ 1.1
TRIM47-203ENST00000586495 GPC2Q8N158 579 aa21.93■■□□□ 1.1
TRIM47-203ENST00000586495 SUPT20HQ8NEM7 779 aa21.93■■□□□ 1.1
TRIM47-203ENST00000586495 ATP5J2-PTCD1G3V325 749 aa21.92■■□□□ 1.1
TRIM47-203ENST00000586495 TRIM28Q13263 835 aaKnown RBP21.92■■□□□ 1.1
TRIM47-203ENST00000586495 GRAPQ13588 217 aa21.92■■□□□ 1.1
TRIM47-203ENST00000586495 CCDC30Q5VVM6 783 aa21.92■■□□□ 1.1
TRIM47-203ENST00000586495 LDHDQ86WU2 507 aa21.92■■□□□ 1.1
TRIM47-203ENST00000586495 SP8Q8IXZ3 490 aa21.92■■□□□ 1.1
TRIM47-203ENST00000586495 GRAPLQ8TC17 118 aaPredicted RBP21.92■■□□□ 1.1
TRIM47-203ENST00000586495 TMC4Q7Z404 712 aa21.91■■□□□ 1.1
TRIM47-203ENST00000586495 NIM1KQ8IY84 436 aa21.91■■□□□ 1.1
TRIM47-203ENST00000586495 C8orf58Q8NAV2 365 aa21.91■■□□□ 1.1
TRIM47-203ENST00000586495 FAM89AQ96GI7 184 aa21.91■■□□□ 1.1
TRIM47-203ENST00000586495 PHAXQ9H814 394 aaKnown RBP21.91■■□□□ 1.1
TRIM47-203ENST00000586495 MRS2Q9HD23 443 aa21.91■■□□□ 1.1
TRIM47-203ENST00000586495 PPIP5K2O43314 1243 aa21.9■■□□□ 1.1
TRIM47-203ENST00000586495 POTEIP0CG38 1075 aa21.9■■□□□ 1.1
TRIM47-203ENST00000586495 POTEJP0CG39 1038 aa21.9■■□□□ 1.1
TRIM47-203ENST00000586495 PNMA8AQ86V59 439 aaPredicted RBP21.9■■□□□ 1.1
TRIM47-203ENST00000586495 DDX58O95786 925 aaKnown RBP21.89■■□□□ 1.09
TRIM47-203ENST00000586495 EPHX2P34913 555 aa21.89■■□□□ 1.09
TRIM47-203ENST00000586495 SF3B3Q15393 1217 aaKnown RBP21.89■■□□□ 1.09
TRIM47-203ENST00000586495 NCBP3Q53F19 620 aaKnown RBP21.89■■□□□ 1.09
TRIM47-203ENST00000586495 EAPPQ56P03 285 aaPredicted RBP21.89■■□□□ 1.09
TRIM47-203ENST00000586495 DPP8Q6V1X1 898 aaPredicted RBP21.89■■□□□ 1.09
TRIM47-203ENST00000586495 MPNDQ8N594 471 aa21.89■■□□□ 1.09
TRIM47-203ENST00000586495 ZNF428Q96B54 188 aa21.89■■□□□ 1.09
TRIM47-203ENST00000586495 GJA3Q9Y6H8 435 aa21.89■■□□□ 1.09
TRIM47-203ENST00000586495 HSP90B1P14625 803 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms