RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 NBPF5PQ86XG9 351 aaPredicted RBP17.23■□□□□ 0.35
VMP1-203ENST00000586245 SUPT16HQ9Y5B9 1047 aaKnown RBP17.23■□□□□ 0.35
VMP1-203ENST00000586245 SERPINB2P05120 415 aa17.22■□□□□ 0.35
VMP1-203ENST00000586245 GTF2E1P29083 439 aaPredicted RBP17.22■□□□□ 0.35
VMP1-203ENST00000586245 DDR1Q08345 913 aa17.22■□□□□ 0.35
VMP1-203ENST00000586245 SUSD4Q5VX71 490 aa17.22■□□□□ 0.35
VMP1-203ENST00000586245 TPTE2Q6XPS3 522 aa17.22■□□□□ 0.35
VMP1-203ENST00000586245 UTP14AQ9BVJ6 771 aaKnown RBP17.22■□□□□ 0.35
VMP1-203ENST00000586245 INTS3Q68E01 1043 aaKnown RBP17.21■□□□□ 0.35
VMP1-203ENST00000586245 TRMT112Q9UI30 125 aaKnown RBP17.21■□□□□ 0.35
VMP1-203ENST00000586245 IBTKQ9P2D0 1353 aaPredicted RBP17.2■□□□□ 0.34
VMP1-203ENST00000586245 GCKRQ14397 625 aa17.2■□□□□ 0.34
VMP1-203ENST00000586245 PDE3AQ14432 1141 aa17.2■□□□□ 0.34
VMP1-203ENST00000586245 TMEM57Q8N5G2 664 aa17.2■□□□□ 0.34
VMP1-203ENST00000586245 CNBD1Q8NA66 436 aa17.2■□□□□ 0.34
VMP1-203ENST00000586245 RNF123Q5XPI4 1314 aa17.2■□□□□ 0.34
VMP1-203ENST00000586245 NTSR2O95665 410 aa17.19■□□□□ 0.34
VMP1-203ENST00000586245 ST5P78524 1137 aa17.19■□□□□ 0.34
VMP1-203ENST00000586245 ITPRIPQ8IWB1 547 aa17.19■□□□□ 0.34
VMP1-203ENST00000586245 ZBTB38Q8NAP3 1195 aaPredicted RBP17.19■□□□□ 0.34
VMP1-203ENST00000586245 PANK1Q8TE04 598 aa17.19■□□□□ 0.34
VMP1-203ENST00000586245 C9orf78Q9NZ63 289 aaPredicted RBP17.19■□□□□ 0.34
VMP1-203ENST00000586245 AFDNP55196 1824 aaKnown RBP17.19■□□□□ 0.34
VMP1-203ENST00000586245 COL24A1Q17RW2 1714 aa17.18■□□□□ 0.34
VMP1-203ENST00000586245 PCCAP05165 728 aaPredicted RBP17.18■□□□□ 0.34
VMP1-203ENST00000586245 RLBP1P12271 317 aa17.18■□□□□ 0.34
VMP1-203ENST00000586245 SH3TC1Q8TE82 1336 aa17.18■□□□□ 0.34
VMP1-203ENST00000586245 GRM8O00222 908 aa17.17■□□□□ 0.34
VMP1-203ENST00000586245 PTGER2P43116 358 aa17.17■□□□□ 0.34
VMP1-203ENST00000586245 RTL5Q5HYW3 569 aaPredicted RBP17.17■□□□□ 0.34
VMP1-203ENST00000586245 PRR5LQ6MZQ0 368 aa17.17■□□□□ 0.34
VMP1-203ENST00000586245 NUTM1Q86Y26 1132 aa17.17■□□□□ 0.34
VMP1-203ENST00000586245 FAM89AQ96GI7 184 aa17.17■□□□□ 0.34
VMP1-203ENST00000586245 SGIP1Q9BQI5 828 aa17.17■□□□□ 0.34
VMP1-203ENST00000586245 N4BP2Q86UW6 1770 aaPredicted RBP17.16■□□□□ 0.34
VMP1-203ENST00000586245 HSP90B1P14625 803 aaKnown RBP17.16■□□□□ 0.34
VMP1-203ENST00000586245 ERFEQ4G0M1 354 aa17.16■□□□□ 0.34
VMP1-203ENST00000586245 C20orf194Q5TEA3 1177 aa17.16■□□□□ 0.34
VMP1-203ENST00000586245 COG6Q9Y2V7 657 aa17.16■□□□□ 0.34
VMP1-203ENST00000586245 H7C1W4 665 aa17.15■□□□□ 0.34
VMP1-203ENST00000586245 MVPQ14764 893 aaKnown RBP17.15■□□□□ 0.34
VMP1-203ENST00000586245 UBE3BQ7Z3V4 1068 aa17.15■□□□□ 0.34
VMP1-203ENST00000586245 CCDC24Q8N4L8 307 aa17.15■□□□□ 0.34
VMP1-203ENST00000586245 JARID2Q92833 1246 aaPredicted RBP17.15■□□□□ 0.34
VMP1-203ENST00000586245 NRXN2Q9P2S2 1712 aa17.14■□□□□ 0.33
VMP1-203ENST00000586245 IRS4O14654 1257 aaPredicted RBP17.14■□□□□ 0.33
VMP1-203ENST00000586245 GNAI3P08754 354 aa17.14■□□□□ 0.33
VMP1-203ENST00000586245 USP44Q9H0E7 712 aa17.14■□□□□ 0.33
VMP1-203ENST00000586245 CHMP4BQ9H444 224 aaKnown RBP17.14■□□□□ 0.33
VMP1-203ENST00000586245 PPP1R1BQ9UD71 204 aaPredicted RBP17.14■□□□□ 0.33
VMP1-203ENST00000586245 DDX19BQ9UMR2 479 aa17.14■□□□□ 0.33
VMP1-203ENST00000586245 HDAC5Q9UQL6 1122 aa17.14■□□□□ 0.33
VMP1-203ENST00000586245 CDHR2Q9BYE9 1310 aa17.14■□□□□ 0.33
VMP1-203ENST00000586245 UBTFL1P0CB47 393 aaPredicted RBP17.13■□□□□ 0.33
VMP1-203ENST00000586245 SYNE4Q8N205 404 aa17.13■□□□□ 0.33
VMP1-203ENST00000586245 BRIP1Q9BX63 1249 aa17.13■□□□□ 0.33
VMP1-203ENST00000586245 UTYO14607 1347 aa17.13■□□□□ 0.33
VMP1-203ENST00000586245 ABCC12Q96J65 1359 aa17.13■□□□□ 0.33
VMP1-203ENST00000586245 NBPF7P0C2Y1 421 aaPredicted RBP17.12■□□□□ 0.33
VMP1-203ENST00000586245 HCLS1P14317 486 aaPredicted RBP17.12■□□□□ 0.33
VMP1-203ENST00000586245 PDE6BP35913 854 aa17.12■□□□□ 0.33
VMP1-203ENST00000586245 SLC10A5Q5PT55 438 aa17.12■□□□□ 0.33
VMP1-203ENST00000586245 NLRP3Q96P20 1036 aa17.12■□□□□ 0.33
VMP1-203ENST00000586245 MEIS3Q99687 375 aa17.12■□□□□ 0.33
VMP1-203ENST00000586245 RIC1Q4ADV7 1423 aa17.12■□□□□ 0.33
VMP1-203ENST00000586245 C10orf71Q711Q0 1435 aa17.12■□□□□ 0.33
VMP1-203ENST00000586245 PDE8AO60658 829 aa17.11■□□□□ 0.33
VMP1-203ENST00000586245 CASP7P55210 303 aa17.11■□□□□ 0.33
VMP1-203ENST00000586245 KLHL34Q8N239 644 aa17.11■□□□□ 0.33
VMP1-203ENST00000586245 ZBTB7BO15156 539 aaPredicted RBP17.1■□□□□ 0.33
VMP1-203ENST00000586245 GNAI2P04899 355 aa17.09■□□□□ 0.33
VMP1-203ENST00000586245 SUCLG2Q96I99 432 aa17.09■□□□□ 0.33
VMP1-203ENST00000586245 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
VMP1-203ENST00000586245 PLA2G12BQ9BX93 195 aa17.09■□□□□ 0.33
VMP1-203ENST00000586245 PDZRN3Q9UPQ7 1066 aa17.09■□□□□ 0.33
VMP1-203ENST00000586245 CD2APQ9Y5K6 639 aa17.09■□□□□ 0.33
VMP1-203ENST00000586245 CTSWP56202 376 aa17.08■□□□□ 0.32
VMP1-203ENST00000586245 H0YIN7 160 aa17.07■□□□□ 0.32
VMP1-203ENST00000586245 TGFB2P61812 414 aa17.07■□□□□ 0.32
VMP1-203ENST00000586245 CCDC152Q4G0S7 254 aa17.07■□□□□ 0.32
VMP1-203ENST00000586245 C2CD5Q86YS7 1000 aa17.07■□□□□ 0.32
VMP1-203ENST00000586245 LRRFIP2Q9Y608 721 aaKnown RBP17.07■□□□□ 0.32
VMP1-203ENST00000586245 LAMB2P55268 1798 aa17.07■□□□□ 0.32
VMP1-203ENST00000586245 KLRG2A4D1S0 409 aaPredicted RBP17.06■□□□□ 0.32
VMP1-203ENST00000586245 IRX6P78412 446 aaPredicted RBP17.06■□□□□ 0.32
VMP1-203ENST00000586245 FOXO4P98177 505 aa17.06■□□□□ 0.32
VMP1-203ENST00000586245 SF3B3Q15393 1217 aaKnown RBP17.06■□□□□ 0.32
VMP1-203ENST00000586245 RPGRQ92834 1020 aaKnown RBP17.06■□□□□ 0.32
VMP1-203ENST00000586245 BICC1Q9H694 974 aaKnown RBP17.06■□□□□ 0.32
VMP1-203ENST00000586245 DDX60Q8IY21 1712 aaKnown RBP17.06■□□□□ 0.32
VMP1-203ENST00000586245 LRP5O75197 1615 aa17.06■□□□□ 0.32
VMP1-203ENST00000586245 TNRC6CQ9HCJ0 1690 aaKnown RBP17.05■□□□□ 0.32
VMP1-203ENST00000586245 NEFLP07196 543 aa17.05■□□□□ 0.32
VMP1-203ENST00000586245 CRY2Q49AN0 593 aa17.05■□□□□ 0.32
VMP1-203ENST00000586245 LMBR1LQ6UX01 489 aa17.05■□□□□ 0.32
VMP1-203ENST00000586245 C3orf67Q6ZVT6 689 aa17.05■□□□□ 0.32
VMP1-203ENST00000586245 TTLL11Q8NHH1 800 aa17.05■□□□□ 0.32
VMP1-203ENST00000586245 KAZALD1Q96I82 304 aa17.05■□□□□ 0.32
VMP1-203ENST00000586245 CHMP3Q9Y3E7 222 aa17.05■□□□□ 0.32
VMP1-203ENST00000586245 ANKRD31Q8N7Z5 1873 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms