RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 ATF5Q9Y2D1 282 aaPredicted RBP22.43■■□□□ 1.18
RBFOX1-222ENST00000585867 ATP10DQ9P241 1426 aa22.42■■□□□ 1.18
RBFOX1-222ENST00000585867 ISCA1Q9BUE6 129 aa22.42■■□□□ 1.18
RBFOX1-222ENST00000585867 ZBTB7BO15156 539 aaPredicted RBP22.42■■□□□ 1.18
RBFOX1-222ENST00000585867 BEND3Q5T5X7 828 aa22.42■■□□□ 1.18
RBFOX1-222ENST00000585867 IGKV5-2P06315 115 aa22.41■■□□□ 1.18
RBFOX1-222ENST00000585867 CWF19L2Q2TBE0 894 aaKnown RBP22.41■■□□□ 1.18
RBFOX1-222ENST00000585867 LINS1Q8NG48 757 aa22.41■■□□□ 1.18
RBFOX1-222ENST00000585867 ANKRD36CQ5JPF3 1778 aa22.4■■□□□ 1.18
RBFOX1-222ENST00000585867 UBN2Q6ZU65 1347 aa22.4■■□□□ 1.18
RBFOX1-222ENST00000585867 MMP10P09238 476 aa22.4■■□□□ 1.18
RBFOX1-222ENST00000585867 TRIM28Q13263 835 aaKnown RBP22.4■■□□□ 1.18
RBFOX1-222ENST00000585867 KDM2BQ8NHM5 1336 aa22.4■■□□□ 1.18
RBFOX1-222ENST00000585867 FAM177BA6PVY3 158 aa22.39■■□□□ 1.18
RBFOX1-222ENST00000585867 PARP10Q53GL7 1025 aa22.39■■□□□ 1.18
RBFOX1-222ENST00000585867 NLRP10Q86W26 655 aa22.39■■□□□ 1.18
RBFOX1-222ENST00000585867 SRCIN1Q9C0H9 1055 aa22.39■■□□□ 1.18
RBFOX1-222ENST00000585867 PARP3Q9Y6F1 533 aa22.39■■□□□ 1.18
RBFOX1-222ENST00000585867 NEURL1BA8MQ27 555 aa22.38■■□□□ 1.17
RBFOX1-222ENST00000585867 DDR1Q08345 913 aa22.38■■□□□ 1.17
RBFOX1-222ENST00000585867 SUSD4Q5VX71 490 aa22.38■■□□□ 1.17
RBFOX1-222ENST00000585867 CCDC191Q8NCU4 936 aa22.38■■□□□ 1.17
RBFOX1-222ENST00000585867 RWDD1Q9H446 243 aaPredicted RBP22.38■■□□□ 1.17
RBFOX1-222ENST00000585867 POLRMTO00411 1230 aaKnown RBP22.38■■□□□ 1.17
RBFOX1-222ENST00000585867 SERPINB2P05120 415 aa22.38■■□□□ 1.17
RBFOX1-222ENST00000585867 CWC25Q9NXE8 425 aaPredicted RBP22.38■■□□□ 1.17
RBFOX1-222ENST00000585867 CARMIL3Q8ND23 1372 aa22.37■■□□□ 1.17
RBFOX1-222ENST00000585867 ALDH1L1O75891 902 aa22.37■■□□□ 1.17
RBFOX1-222ENST00000585867 PPP1R42Q7Z4L9 355 aa22.37■■□□□ 1.17
RBFOX1-222ENST00000585867 POLD1P28340 1107 aa22.36■■□□□ 1.17
RBFOX1-222ENST00000585867 NBPF5PQ86XG9 351 aaPredicted RBP22.36■■□□□ 1.17
RBFOX1-222ENST00000585867 SPON1Q9HCB6 807 aa22.36■■□□□ 1.17
RBFOX1-222ENST00000585867 PCDHB15Q9Y5E8 787 aa22.36■■□□□ 1.17
RBFOX1-222ENST00000585867 GCKRQ14397 625 aa22.35■■□□□ 1.17
RBFOX1-222ENST00000585867 UTP14AQ9BVJ6 771 aaKnown RBP22.35■■□□□ 1.17
RBFOX1-222ENST00000585867 AFDNP55196 1824 aaKnown RBP22.35■■□□□ 1.17
RBFOX1-222ENST00000585867 COL24A1Q17RW2 1714 aa22.35■■□□□ 1.17
RBFOX1-222ENST00000585867 TPTE2Q6XPS3 522 aa22.34■■□□□ 1.17
RBFOX1-222ENST00000585867 TRMT112Q9UI30 125 aaKnown RBP22.34■■□□□ 1.17
RBFOX1-222ENST00000585867 NPHP1O15259 732 aa22.33■■□□□ 1.17
RBFOX1-222ENST00000585867 NTSR2O95665 410 aa22.33■■□□□ 1.17
RBFOX1-222ENST00000585867 GNAI3P08754 354 aa22.33■■□□□ 1.17
RBFOX1-222ENST00000585867 HDAC1Q13547 482 aaPredicted RBP22.33■■□□□ 1.17
RBFOX1-222ENST00000585867 NYXQ9GZU5 481 aa22.33■■□□□ 1.17
RBFOX1-222ENST00000585867 GTF2E1P29083 439 aaPredicted RBP22.33■■□□□ 1.16
RBFOX1-222ENST00000585867 PTGER2P43116 358 aa22.33■■□□□ 1.16
RBFOX1-222ENST00000585867 SGIP1Q9BQI5 828 aa22.33■■□□□ 1.16
RBFOX1-222ENST00000585867 NUTM1Q86Y26 1132 aa22.32■■□□□ 1.16
RBFOX1-222ENST00000585867 JARID2Q92833 1246 aaPredicted RBP22.32■■□□□ 1.16
RBFOX1-222ENST00000585867 IBTKQ9P2D0 1353 aaPredicted RBP22.32■■□□□ 1.16
RBFOX1-222ENST00000585867 RTL5Q5HYW3 569 aaPredicted RBP22.31■■□□□ 1.16
RBFOX1-222ENST00000585867 CNBD1Q8NA66 436 aa22.31■■□□□ 1.16
RBFOX1-222ENST00000585867 ZBTB38Q8NAP3 1195 aaPredicted RBP22.31■■□□□ 1.16
RBFOX1-222ENST00000585867 FAM89AQ96GI7 184 aa22.31■■□□□ 1.16
RBFOX1-222ENST00000585867 C9orf78Q9NZ63 289 aaPredicted RBP22.31■■□□□ 1.16
RBFOX1-222ENST00000585867 H7C1W4 665 aa22.3■■□□□ 1.16
RBFOX1-222ENST00000585867 IGHDP01880 384 aa22.3■■□□□ 1.16
RBFOX1-222ENST00000585867 PCCAP05165 728 aaPredicted RBP22.3■■□□□ 1.16
RBFOX1-222ENST00000585867 ERFEQ4G0M1 354 aa22.3■■□□□ 1.16
RBFOX1-222ENST00000585867 PRR5LQ6MZQ0 368 aa22.3■■□□□ 1.16
RBFOX1-222ENST00000585867 SYNE4Q8N205 404 aa22.3■■□□□ 1.16
RBFOX1-222ENST00000585867 CCDC24Q8N4L8 307 aa22.3■■□□□ 1.16
RBFOX1-222ENST00000585867 SH3TC1Q8TE82 1336 aa22.3■■□□□ 1.16
RBFOX1-222ENST00000585867 GRM8O00222 908 aa22.29■■□□□ 1.16
RBFOX1-222ENST00000585867 USP44Q9H0E7 712 aa22.29■■□□□ 1.16
RBFOX1-222ENST00000585867 UBE3BQ7Z3V4 1068 aa22.29■■□□□ 1.16
RBFOX1-222ENST00000585867 MEIS3Q99687 375 aa22.29■■□□□ 1.16
RBFOX1-222ENST00000585867 NRXN2Q9P2S2 1712 aa22.28■■□□□ 1.16
RBFOX1-222ENST00000585867 ST5P78524 1137 aa22.28■■□□□ 1.16
RBFOX1-222ENST00000585867 RPAP2Q8IXW5 612 aaPredicted RBP22.28■■□□□ 1.16
RBFOX1-222ENST00000585867 HDAC5Q9UQL6 1122 aa22.28■■□□□ 1.16
RBFOX1-222ENST00000585867 GNAI2P04899 355 aa22.27■■□□□ 1.16
RBFOX1-222ENST00000585867 NBPF7P0C2Y1 421 aaPredicted RBP22.27■■□□□ 1.16
RBFOX1-222ENST00000585867 IRS4O14654 1257 aaPredicted RBP22.26■■□□□ 1.15
RBFOX1-222ENST00000585867 C1orf115Q9H7X2 142 aa22.26■■□□□ 1.15
RBFOX1-222ENST00000585867 UTYO14607 1347 aa22.26■■□□□ 1.15
RBFOX1-222ENST00000585867 CASP7P55210 303 aa22.25■■□□□ 1.15
RBFOX1-222ENST00000585867 SLC10A5Q5PT55 438 aa22.25■■□□□ 1.15
RBFOX1-222ENST00000585867 CDHR2Q9BYE9 1310 aa22.25■■□□□ 1.15
RBFOX1-222ENST00000585867 UBTFL1P0CB47 393 aaPredicted RBP22.25■■□□□ 1.15
RBFOX1-222ENST00000585867 HCLS1P14317 486 aaPredicted RBP22.25■■□□□ 1.15
RBFOX1-222ENST00000585867 ABCC12Q96J65 1359 aa22.24■■□□□ 1.15
RBFOX1-222ENST00000585867 ANKRD44Q8N8A2 993 aa22.24■■□□□ 1.15
RBFOX1-222ENST00000585867 HMMRO75330 724 aa22.23■■□□□ 1.15
RBFOX1-222ENST00000585867 BRIP1Q9BX63 1249 aa22.23■■□□□ 1.15
RBFOX1-222ENST00000585867 HSP90B1P14625 803 aaKnown RBP22.22■■□□□ 1.15
RBFOX1-222ENST00000585867 CEP85Q6P2H3 762 aa22.22■■□□□ 1.15
RBFOX1-222ENST00000585867 GCC1Q96CN9 775 aa22.22■■□□□ 1.15
RBFOX1-222ENST00000585867 PDE8AO60658 829 aa22.21■■□□□ 1.15
RBFOX1-222ENST00000585867 SMC5Q8IY18 1101 aa22.21■■□□□ 1.15
RBFOX1-222ENST00000585867 KLHL34Q8N239 644 aa22.21■■□□□ 1.15
RBFOX1-222ENST00000585867 SUCLG2Q96I99 432 aa22.21■■□□□ 1.15
RBFOX1-222ENST00000585867 NLRP3Q96P20 1036 aa22.21■■□□□ 1.15
RBFOX1-222ENST00000585867 PPP1R1BQ9UD71 204 aaPredicted RBP22.21■■□□□ 1.15
RBFOX1-222ENST00000585867 C10orf71Q711Q0 1435 aa22.21■■□□□ 1.15
RBFOX1-222ENST00000585867 DDX60Q8IY21 1712 aaKnown RBP22.2■■□□□ 1.14
RBFOX1-222ENST00000585867 PDE6BP35913 854 aa22.2■■□□□ 1.14
RBFOX1-222ENST00000585867 PLA2G12BQ9BX93 195 aa22.2■■□□□ 1.14
RBFOX1-222ENST00000585867 C3orf67Q6ZVT6 689 aa22.19■■□□□ 1.14
RBFOX1-222ENST00000585867 RIC1Q4ADV7 1423 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms