RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 YBX3P16989 372 aaKnown RBP eCLIP15.98■□□□□ 0.15
VMP1-202ENST00000585847 GPTP24298 496 aa15.98■□□□□ 0.15
VMP1-202ENST00000585847 FRAT1Q92837 279 aaPredicted RBP15.98■□□□□ 0.15
VMP1-202ENST00000585847 MYD88Q99836 296 aa15.98■□□□□ 0.15
VMP1-202ENST00000585847 DDX19BQ9UMR2 479 aa15.98■□□□□ 0.15
VMP1-202ENST00000585847 NIP7Q9Y221 180 aaKnown RBP eCLIP15.98■□□□□ 0.15
VMP1-202ENST00000585847 ZNF652Q9Y2D9 606 aa15.98■□□□□ 0.15
VMP1-202ENST00000585847 ATP5J2-PTCD1G3V325 749 aa15.97■□□□□ 0.15
VMP1-202ENST00000585847 TRIM28Q13263 835 aaKnown RBP15.97■□□□□ 0.15
VMP1-202ENST00000585847 BEND3Q5T5X7 828 aa15.97■□□□□ 0.15
VMP1-202ENST00000585847 SUSD4Q5VX71 490 aa15.97■□□□□ 0.15
VMP1-202ENST00000585847 NLRP10Q86W26 655 aa15.97■□□□□ 0.15
VMP1-202ENST00000585847 ANKRD31Q8N7Z5 1873 aa15.97■□□□□ 0.15
VMP1-202ENST00000585847 KIF13BQ9NQT8 1826 aa15.96■□□□□ 0.15
VMP1-202ENST00000585847 TRIM27P14373 513 aa15.96■□□□□ 0.15
VMP1-202ENST00000585847 HSP90AB3PQ58FF7 597 aa15.96■□□□□ 0.15
VMP1-202ENST00000585847 ABCC4O15439 1325 aa15.95■□□□□ 0.14
VMP1-202ENST00000585847 NTSR2O95665 410 aa15.95■□□□□ 0.14
VMP1-202ENST00000585847 SERPINB2P05120 415 aa15.95■□□□□ 0.14
VMP1-202ENST00000585847 MVPQ14764 893 aaKnown RBP15.95■□□□□ 0.14
VMP1-202ENST00000585847 CWF19L2Q2TBE0 894 aaKnown RBP15.95■□□□□ 0.14
VMP1-202ENST00000585847 SETDB2Q96T68 719 aa15.95■□□□□ 0.14
VMP1-202ENST00000585847 CD2APQ9Y5K6 639 aa15.95■□□□□ 0.14
VMP1-202ENST00000585847 CARMIL3Q8ND23 1372 aa15.95■□□□□ 0.14
VMP1-202ENST00000585847 IBTKQ9P2D0 1353 aaPredicted RBP15.95■□□□□ 0.14
VMP1-202ENST00000585847 PXDNLA1KZ92 1463 aa15.95■□□□□ 0.14
VMP1-202ENST00000585847 KIAA1551Q9HCM1 1747 aa15.94■□□□□ 0.14
VMP1-202ENST00000585847 NEURL1BA8MQ27 555 aa15.94■□□□□ 0.14
VMP1-202ENST00000585847 PLIN1O60240 522 aa15.94■□□□□ 0.14
VMP1-202ENST00000585847 RLBP1P12271 317 aa15.94■□□□□ 0.14
VMP1-202ENST00000585847 DDX60Q8IY21 1712 aaKnown RBP15.94■□□□□ 0.14
VMP1-202ENST00000585847 ABCC12Q96J65 1359 aa15.93■□□□□ 0.14
VMP1-202ENST00000585847 PARP10Q53GL7 1025 aa15.93■□□□□ 0.14
VMP1-202ENST00000585847 PRR5LQ6MZQ0 368 aa15.93■□□□□ 0.14
VMP1-202ENST00000585847 SYNE4Q8N205 404 aa15.93■□□□□ 0.14
VMP1-202ENST00000585847 LINS1Q8NG48 757 aa15.93■□□□□ 0.14
VMP1-202ENST00000585847 CCDC136Q96JN2 1154 aa15.93■□□□□ 0.14
VMP1-202ENST00000585847 GPBP1L1Q9HC44 474 aaPredicted RBP15.93■□□□□ 0.14
VMP1-202ENST00000585847 PARP3Q9Y6F1 533 aa15.93■□□□□ 0.14
VMP1-202ENST00000585847 TNRC6CQ9HCJ0 1690 aaKnown RBP15.92■□□□□ 0.14
VMP1-202ENST00000585847 FAM177BA6PVY3 158 aa15.92■□□□□ 0.14
VMP1-202ENST00000585847 CASP7P55210 303 aa15.92■□□□□ 0.14
VMP1-202ENST00000585847 SLC4A10Q6U841 1118 aa15.92■□□□□ 0.14
VMP1-202ENST00000585847 CCDC24Q8N4L8 307 aa15.92■□□□□ 0.14
VMP1-202ENST00000585847 CCDC191Q8NCU4 936 aa15.92■□□□□ 0.14
VMP1-202ENST00000585847 CRBNQ96SW2 442 aa15.92■□□□□ 0.14
VMP1-202ENST00000585847 C10orf71Q711Q0 1435 aa15.92■□□□□ 0.14
VMP1-202ENST00000585847 LAMB2P55268 1798 aa15.91■□□□□ 0.14
VMP1-202ENST00000585847 CCT4P50991 539 aaKnown RBP15.91■□□□□ 0.14
VMP1-202ENST00000585847 IRX6P78412 446 aaPredicted RBP15.91■□□□□ 0.14
VMP1-202ENST00000585847 NUTM1Q86Y26 1132 aa15.91■□□□□ 0.14
VMP1-202ENST00000585847 EXOC6Q8TAG9 804 aa15.91■□□□□ 0.14
VMP1-202ENST00000585847 JARID2Q92833 1246 aaPredicted RBP15.91■□□□□ 0.14
VMP1-202ENST00000585847 CLUAP1Q96AJ1 413 aa15.91■□□□□ 0.14
VMP1-202ENST00000585847 H7C1W4 665 aa15.9■□□□□ 0.14
VMP1-202ENST00000585847 ALDH1L1O75891 902 aa15.9■□□□□ 0.14
VMP1-202ENST00000585847 GCKRQ14397 625 aa15.9■□□□□ 0.14
VMP1-202ENST00000585847 ERFEQ4G0M1 354 aa15.9■□□□□ 0.14
VMP1-202ENST00000585847 C20orf194Q5TEA3 1177 aa15.9■□□□□ 0.14
VMP1-202ENST00000585847 INTS3Q68E01 1043 aaKnown RBP15.9■□□□□ 0.14
VMP1-202ENST00000585847 TMEM57Q8N5G2 664 aa15.9■□□□□ 0.14
VMP1-202ENST00000585847 UTP14AQ9BVJ6 771 aaKnown RBP15.9■□□□□ 0.14
VMP1-202ENST00000585847 SRCIN1Q9C0H9 1055 aa15.9■□□□□ 0.14
VMP1-202ENST00000585847 CWC25Q9NXE8 425 aaPredicted RBP15.9■□□□□ 0.14
VMP1-202ENST00000585847 NEXNQ0ZGT2 675 aa15.89■□□□□ 0.13
VMP1-202ENST00000585847 PPP1R42Q7Z4L9 355 aa15.89■□□□□ 0.13
VMP1-202ENST00000585847 NBPF5PQ86XG9 351 aaPredicted RBP15.89■□□□□ 0.13
VMP1-202ENST00000585847 ZNF526Q8TF50 670 aaPredicted RBP15.89■□□□□ 0.13
VMP1-202ENST00000585847 FAM89AQ96GI7 184 aa15.89■□□□□ 0.13
VMP1-202ENST00000585847 COL11A2P13942 1736 aaPredicted RBP15.88■□□□□ 0.13
VMP1-202ENST00000585847 CEP350Q5VT06 3117 aa15.88■□□□□ 0.13
VMP1-202ENST00000585847 RIC1Q4ADV7 1423 aa15.88■□□□□ 0.13
VMP1-202ENST00000585847 PCCAP05165 728 aaPredicted RBP15.88■□□□□ 0.13
VMP1-202ENST00000585847 SLC10A5Q5PT55 438 aa15.88■□□□□ 0.13
VMP1-202ENST00000585847 TPTE2Q6XPS3 522 aa15.88■□□□□ 0.13
VMP1-202ENST00000585847 C3orf67Q6ZVT6 689 aa15.88■□□□□ 0.13
VMP1-202ENST00000585847 CNBD1Q8NA66 436 aa15.88■□□□□ 0.13
VMP1-202ENST00000585847 ZBTB38Q8NAP3 1195 aaPredicted RBP15.88■□□□□ 0.13
VMP1-202ENST00000585847 PANK1Q8TE04 598 aa15.88■□□□□ 0.13
VMP1-202ENST00000585847 NYXQ9GZU5 481 aa15.88■□□□□ 0.13
VMP1-202ENST00000585847 TRMT112Q9UI30 125 aaKnown RBP15.88■□□□□ 0.13
VMP1-202ENST00000585847 HDAC5Q9UQL6 1122 aa15.88■□□□□ 0.13
VMP1-202ENST00000585847 UTYO14607 1347 aa15.88■□□□□ 0.13
VMP1-202ENST00000585847 RTL5Q5HYW3 569 aaPredicted RBP15.87■□□□□ 0.13
VMP1-202ENST00000585847 IFFO2Q5TF58 517 aa15.87■□□□□ 0.13
VMP1-202ENST00000585847 CENPQQ7L2Z9 268 aaPredicted RBP15.87■□□□□ 0.13
VMP1-202ENST00000585847 ITPRIPQ8IWB1 547 aa15.87■□□□□ 0.13
VMP1-202ENST00000585847 USP44Q9H0E7 712 aa15.87■□□□□ 0.13
VMP1-202ENST00000585847 WWC3Q9ULE0 1092 aa15.87■□□□□ 0.13
VMP1-202ENST00000585847 COG6Q9Y2V7 657 aa15.87■□□□□ 0.13
VMP1-202ENST00000585847 SH3TC1Q8TE82 1336 aa15.87■□□□□ 0.13
VMP1-202ENST00000585847 MYH3P11055 1940 aa15.86■□□□□ 0.13
VMP1-202ENST00000585847 DLEC1Q9Y238 1755 aa15.86■□□□□ 0.13
VMP1-202ENST00000585847 KLRG2A4D1S0 409 aaPredicted RBP15.86■□□□□ 0.13
VMP1-202ENST00000585847 KAZALD1Q96I82 304 aa15.86■□□□□ 0.13
VMP1-202ENST00000585847 CDHR2Q9BYE9 1310 aa15.86■□□□□ 0.13
VMP1-202ENST00000585847 BRCA1P38398 1863 aaKnown RBP15.86■□□□□ 0.13
VMP1-202ENST00000585847 GRM8O00222 908 aa15.85■□□□□ 0.13
VMP1-202ENST00000585847 NBPF7P0C2Y1 421 aaPredicted RBP15.85■□□□□ 0.13
VMP1-202ENST00000585847 HCLS1P14317 486 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms