RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 MVPQ14764 893 aaKnown RBP21.33■■□□□ 1.01
HMG20B-215ENST00000585741 INTS3Q68E01 1043 aaKnown RBP21.33■■□□□ 1.01
HMG20B-215ENST00000585741 LINS1Q8NG48 757 aa21.33■■□□□ 1.01
HMG20B-215ENST00000585741 C4AP0C0L4 1744 aa21.32■■□□□ 1
HMG20B-215ENST00000585741 A0A0G2JLW4 131 aa21.32■■□□□ 1
HMG20B-215ENST00000585741 ALDH1L1O75891 902 aa21.32■■□□□ 1
HMG20B-215ENST00000585741 CAMTA2O94983 1202 aa21.32■■□□□ 1
HMG20B-215ENST00000585741 TCIRG1Q13488 830 aa21.32■■□□□ 1
HMG20B-215ENST00000585741 USPL1Q5W0Q7 1092 aa21.32■■□□□ 1
HMG20B-215ENST00000585741 CRBNQ96SW2 442 aa21.32■■□□□ 1
HMG20B-215ENST00000585741 FKBP8Q14318 412 aa21.31■■□□□ 1
HMG20B-215ENST00000585741 HLFQ16534 295 aa21.31■■□□□ 1
HMG20B-215ENST00000585741 BEND3Q5T5X7 828 aa21.31■■□□□ 1
HMG20B-215ENST00000585741 CLEC4GQ6UXB4 293 aa21.31■■□□□ 1
HMG20B-215ENST00000585741 ATP5J2-PTCD1G3V325 749 aa21.3■■□□□ 1
HMG20B-215ENST00000585741 DPEP1P16444 411 aa21.3■■□□□ 1
HMG20B-215ENST00000585741 HSPA6P17066 643 aa21.3■■□□□ 1
HMG20B-215ENST00000585741 KCNA3P22001 575 aa21.3■■□□□ 1
HMG20B-215ENST00000585741 C9orf78Q9NZ63 289 aaPredicted RBP21.3■■□□□ 1
HMG20B-215ENST00000585741 SRP68Q9UHB9 627 aaKnown RBP21.3■■□□□ 1
HMG20B-215ENST00000585741 USP42Q9H9J4 1324 aaKnown RBP21.29■■□□□ 1
HMG20B-215ENST00000585741 RGL2O15211 777 aa21.29■■□□□ 1
HMG20B-215ENST00000585741 BRCA1P38398 1863 aaKnown RBP21.28■■□□□ 1
HMG20B-215ENST00000585741 GPTP24298 496 aa21.28■■□□□ 1
HMG20B-215ENST00000585741 CWF19L2Q2TBE0 894 aaKnown RBP21.28■■□□□ 1
HMG20B-215ENST00000585741 CWC25Q9NXE8 425 aaPredicted RBP21.28■■□□□ 1
HMG20B-215ENST00000585741 HDAC5Q9UQL6 1122 aa21.28■■□□□ 1
HMG20B-215ENST00000585741 NIP7Q9Y221 180 aaKnown RBP eCLIP21.28■■□□□ 1
HMG20B-215ENST00000585741 BCS1LQ9Y276 419 aa21.28■■□□□ 1
HMG20B-215ENST00000585741 NEURL1BA8MQ27 555 aa21.27■■□□□ 1
HMG20B-215ENST00000585741 BICDL1Q6ZP65 573 aa21.27■■□□□ 1
HMG20B-215ENST00000585741 CCDC191Q8NCU4 936 aa21.27■■□□□ 1
HMG20B-215ENST00000585741 NPHP1O15259 732 aa21.26■□□□□ 0.99
HMG20B-215ENST00000585741 GNAI3P08754 354 aa21.26■□□□□ 0.99
HMG20B-215ENST00000585741 PARP10Q53GL7 1025 aa21.26■□□□□ 0.99
HMG20B-215ENST00000585741 EXOC6Q8TAG9 804 aa21.26■□□□□ 0.99
HMG20B-215ENST00000585741 ARFGEF2Q9Y6D5 1785 aa21.25■□□□□ 0.99
HMG20B-215ENST00000585741 IGKV5-2P06315 115 aa21.25■□□□□ 0.99
HMG20B-215ENST00000585741 DDR1Q08345 913 aa21.25■□□□□ 0.99
HMG20B-215ENST00000585741 SETDB2Q96T68 719 aa21.25■□□□□ 0.99
HMG20B-215ENST00000585741 ISCA1Q9BUE6 129 aa21.25■□□□□ 0.99
HMG20B-215ENST00000585741 PARP3Q9Y6F1 533 aa21.25■□□□□ 0.99
HMG20B-215ENST00000585741 UBTFL1P0CB47 393 aaPredicted RBP21.24■□□□□ 0.99
HMG20B-215ENST00000585741 TRIM28Q13263 835 aaKnown RBP21.24■□□□□ 0.99
HMG20B-215ENST00000585741 AAMPQ13685 434 aa21.24■□□□□ 0.99
HMG20B-215ENST00000585741 GCKRQ14397 625 aa21.24■□□□□ 0.99
HMG20B-215ENST00000585741 PPP1R42Q7Z4L9 355 aa21.24■□□□□ 0.99
HMG20B-215ENST00000585741 FAM177BA6PVY3 158 aa21.23■□□□□ 0.99
HMG20B-215ENST00000585741 GRM8O00222 908 aa21.23■□□□□ 0.99
HMG20B-215ENST00000585741 GTF2E1P29083 439 aaPredicted RBP21.23■□□□□ 0.99
HMG20B-215ENST00000585741 ZNF34Q8IZ26 560 aa21.23■□□□□ 0.99
HMG20B-215ENST00000585741 ERICH6BQ5W0A0 696 aa21.22■□□□□ 0.99
HMG20B-215ENST00000585741 TBC1D9BQ66K14 1250 aa21.22■□□□□ 0.99
HMG20B-215ENST00000585741 ARHGAP27Q6ZUM4 889 aa21.22■□□□□ 0.99
HMG20B-215ENST00000585741 NLRP10Q86W26 655 aa21.22■□□□□ 0.99
HMG20B-215ENST00000585741 BCL2L12Q9HB09 334 aa21.22■□□□□ 0.99
HMG20B-215ENST00000585741 TRMT112Q9UI30 125 aaKnown RBP21.22■□□□□ 0.99
HMG20B-215ENST00000585741 ZBTB7BO15156 539 aaPredicted RBP21.21■□□□□ 0.99
HMG20B-215ENST00000585741 TM4SF1P30408 202 aa21.21■□□□□ 0.99
HMG20B-215ENST00000585741 IFFO2Q5TF58 517 aa21.21■□□□□ 0.99
HMG20B-215ENST00000585741 MEIS3Q99687 375 aa21.21■□□□□ 0.99
HMG20B-215ENST00000585741 UTP14AQ9BVJ6 771 aaKnown RBP21.21■□□□□ 0.99
HMG20B-215ENST00000585741 NYXQ9GZU5 481 aa21.21■□□□□ 0.99
HMG20B-215ENST00000585741 SCN7AQ01118 1682 aa21.21■□□□□ 0.99
HMG20B-215ENST00000585741 GNAI2P04899 355 aa21.2■□□□□ 0.98
HMG20B-215ENST00000585741 HSP90B1P14625 803 aaKnown RBP21.2■□□□□ 0.98
HMG20B-215ENST00000585741 NBPF5PQ86XG9 351 aaPredicted RBP21.2■□□□□ 0.98
HMG20B-215ENST00000585741 USP44Q9H0E7 712 aa21.2■□□□□ 0.98
HMG20B-215ENST00000585741 BCORQ6W2J9 1755 aa21.2■□□□□ 0.98
HMG20B-215ENST00000585741 ARFGEF1Q9Y6D6 1849 aa21.2■□□□□ 0.98
HMG20B-215ENST00000585741 POLRMTO00411 1230 aaKnown RBP21.19■□□□□ 0.98
HMG20B-215ENST00000585741 RTL5Q5HYW3 569 aaPredicted RBP21.19■□□□□ 0.98
HMG20B-215ENST00000585741 UBE3BQ7Z3V4 1068 aa21.19■□□□□ 0.98
HMG20B-215ENST00000585741 NUP98P52948 1817 aa21.19■□□□□ 0.98
HMG20B-215ENST00000585741 PCCAP05165 728 aaPredicted RBP21.18■□□□□ 0.98
HMG20B-215ENST00000585741 TPTE2Q6XPS3 522 aa21.18■□□□□ 0.98
HMG20B-215ENST00000585741 ZBTB38Q8NAP3 1195 aaPredicted RBP21.18■□□□□ 0.98
HMG20B-215ENST00000585741 NMRK2Q9NPI5 230 aa21.18■□□□□ 0.98
HMG20B-215ENST00000585741 UBN2Q6ZU65 1347 aa21.18■□□□□ 0.98
HMG20B-215ENST00000585741 CARMIL3Q8ND23 1372 aa21.18■□□□□ 0.98
HMG20B-215ENST00000585741 NBPF7P0C2Y1 421 aaPredicted RBP21.17■□□□□ 0.98
HMG20B-215ENST00000585741 NFIXQ14938 502 aa21.17■□□□□ 0.98
HMG20B-215ENST00000585741 SUSD4Q5VX71 490 aa21.17■□□□□ 0.98
HMG20B-215ENST00000585741 ZBTB40Q9NUA8 1239 aa21.17■□□□□ 0.98
HMG20B-215ENST00000585741 PIM2Q9P1W9 311 aa21.17■□□□□ 0.98
HMG20B-215ENST00000585741 IBTKQ9P2D0 1353 aaPredicted RBP21.17■□□□□ 0.98
HMG20B-215ENST00000585741 AFDNP55196 1824 aaKnown RBP21.17■□□□□ 0.98
HMG20B-215ENST00000585741 SH3TC1Q8TE82 1336 aa21.16■□□□□ 0.98
HMG20B-215ENST00000585741 TOMM70O94826 608 aa21.16■□□□□ 0.98
HMG20B-215ENST00000585741 CHRNA5P30532 468 aa21.16■□□□□ 0.98
HMG20B-215ENST00000585741 C9orf131Q5VYM1 1079 aa21.16■□□□□ 0.98
HMG20B-215ENST00000585741 JARID2Q92833 1246 aaPredicted RBP21.16■□□□□ 0.98
HMG20B-215ENST00000585741 FAM89AQ96GI7 184 aa21.16■□□□□ 0.98
HMG20B-215ENST00000585741 C1orf115Q9H7X2 142 aa21.16■□□□□ 0.98
HMG20B-215ENST00000585741 GTF3C3Q9Y5Q9 886 aa21.16■□□□□ 0.98
HMG20B-215ENST00000585741 ANKRD36CQ5JPF3 1778 aa21.15■□□□□ 0.98
HMG20B-215ENST00000585741 H7C1W4 665 aa21.15■□□□□ 0.98
HMG20B-215ENST00000585741 LRRFIP2Q9Y608 721 aaKnown RBP21.15■□□□□ 0.98
HMG20B-215ENST00000585741 UTYO14607 1347 aa21.14■□□□□ 0.97
HMG20B-215ENST00000585741 DALRD3Q5D0E6 543 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms