RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 NBPF15Q8N660 670 aa13.74□□□□□ -0.21
LIG3-204ENST00000585740 PI4K2BQ8TCG2 481 aa13.74□□□□□ -0.21
LIG3-204ENST00000585740 CIZ1Q9ULV3 898 aaPredicted RBP13.74□□□□□ -0.21
LIG3-204ENST00000585740 K7ELQ4 463 aaPredicted RBP13.73□□□□□ -0.21
LIG3-204ENST00000585740 CCDC191Q8NCU4 936 aa13.73□□□□□ -0.21
LIG3-204ENST00000585740 SLKQ9H2G2 1235 aaPredicted RBP13.73□□□□□ -0.21
LIG3-204ENST00000585740 COPRSQ9NQ92 184 aa13.73□□□□□ -0.21
LIG3-204ENST00000585740 ECHDC1Q9NTX5 307 aa13.73□□□□□ -0.21
LIG3-204ENST00000585740 CWC25Q9NXE8 425 aaPredicted RBP13.73□□□□□ -0.21
LIG3-204ENST00000585740 A0A087WZG4 1122 aa13.72□□□□□ -0.21
LIG3-204ENST00000585740 H7C1W4 665 aa13.72□□□□□ -0.21
LIG3-204ENST00000585740 PTCD1O75127 700 aaKnown RBP13.72□□□□□ -0.21
LIG3-204ENST00000585740 STARD3NLO95772 234 aa13.72□□□□□ -0.21
LIG3-204ENST00000585740 ANAPC15P60006 121 aa13.72□□□□□ -0.21
LIG3-204ENST00000585740 EZH2Q15910 746 aaKnown RBP13.72□□□□□ -0.21
LIG3-204ENST00000585740 TSHZ3Q63HK5 1081 aa13.72□□□□□ -0.21
LIG3-204ENST00000585740 PIAS4Q8N2W9 510 aaPredicted RBP13.72□□□□□ -0.21
LIG3-204ENST00000585740 TJP1Q07157 1748 aa13.72□□□□□ -0.21
LIG3-204ENST00000585740 KAT6BQ8WYB5 2073 aa13.71□□□□□ -0.21
LIG3-204ENST00000585740 HIP1O00291 1037 aa13.71□□□□□ -0.21
LIG3-204ENST00000585740 ST18O60284 1047 aa13.71□□□□□ -0.21
LIG3-204ENST00000585740 A1BGP04217 495 aa13.71□□□□□ -0.21
LIG3-204ENST00000585740 CASP7P55210 303 aa13.71□□□□□ -0.21
LIG3-204ENST00000585740 RUFY2Q8WXA3 655 aa13.71□□□□□ -0.21
LIG3-204ENST00000585740 PIGBQ92521 554 aa13.71□□□□□ -0.21
LIG3-204ENST00000585740 PA2G4Q9UQ80 394 aaKnown RBP13.71□□□□□ -0.21
LIG3-204ENST00000585740 BCL9O00512 1426 aa13.71□□□□□ -0.22
LIG3-204ENST00000585740 PIP4K2AP48426 406 aaPredicted RBP13.7□□□□□ -0.22
LIG3-204ENST00000585740 KIF6Q6ZMV9 814 aa13.7□□□□□ -0.22
LIG3-204ENST00000585740 UBE3BQ7Z3V4 1068 aa13.7□□□□□ -0.22
LIG3-204ENST00000585740 AACSQ86V21 672 aa13.7□□□□□ -0.22
LIG3-204ENST00000585740 ATG3Q9NT62 314 aa13.7□□□□□ -0.22
LIG3-204ENST00000585740 DOT1LQ8TEK3 1739 aa13.7□□□□□ -0.22
LIG3-204ENST00000585740 SPATA31A1Q5TZJ5 1347 aa13.69□□□□□ -0.22
LIG3-204ENST00000585740 ATP5J2-PTCD1G3V325 749 aa13.69□□□□□ -0.22
LIG3-204ENST00000585740 SASH1O94885 1247 aa13.69□□□□□ -0.22
LIG3-204ENST00000585740 MCM2P49736 904 aa13.69□□□□□ -0.22
LIG3-204ENST00000585740 TRIM28Q13263 835 aaKnown RBP13.69□□□□□ -0.22
LIG3-204ENST00000585740 HSP90AB3PQ58FF7 597 aa13.69□□□□□ -0.22
LIG3-204ENST00000585740 EPHA10Q5JZY3 1008 aa13.69□□□□□ -0.22
LIG3-204ENST00000585740 TTLL7Q6ZT98 887 aa13.69□□□□□ -0.22
LIG3-204ENST00000585740 EVI5LQ96CN4 794 aa13.69□□□□□ -0.22
LIG3-204ENST00000585740 IL17RAQ96F46 866 aa13.69□□□□□ -0.22
LIG3-204ENST00000585740 ANKRD36CQ5JPF3 1778 aa13.68□□□□□ -0.22
LIG3-204ENST00000585740 HSP90AA1P07900 732 aaKnown RBP13.68□□□□□ -0.22
LIG3-204ENST00000585740 RFX5P48382 616 aaPredicted RBP13.68□□□□□ -0.22
LIG3-204ENST00000585740 CAMKK2Q96RR4 588 aa13.68□□□□□ -0.22
LIG3-204ENST00000585740 ISCA1Q9BUE6 129 aa13.68□□□□□ -0.22
LIG3-204ENST00000585740 ANO2Q9NQ90 1003 aa13.68□□□□□ -0.22
LIG3-204ENST00000585740 ASAP1Q9ULH1 1129 aa13.68□□□□□ -0.22
LIG3-204ENST00000585740 SGSM2O43147 1006 aa13.67□□□□□ -0.22
LIG3-204ENST00000585740 ADRA2BP18089 450 aa13.67□□□□□ -0.22
LIG3-204ENST00000585740 PTPN12Q05209 780 aaKnown RBP13.67□□□□□ -0.22
LIG3-204ENST00000585740 TCIRG1Q13488 830 aa13.67□□□□□ -0.22
LIG3-204ENST00000585740 DNAJC10Q8IXB1 793 aa13.67□□□□□ -0.22
LIG3-204ENST00000585740 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
LIG3-204ENST00000585740 DIAPH3Q9NSV4 1193 aa13.67□□□□□ -0.22
LIG3-204ENST00000585740 CICQ96RK0 1608 aaPredicted RBP13.67□□□□□ -0.22
LIG3-204ENST00000585740 TRIM37O94972 964 aa13.66□□□□□ -0.22
LIG3-204ENST00000585740 DDIT3P35638 169 aa13.66□□□□□ -0.22
LIG3-204ENST00000585740 DDB1Q16531 1140 aa13.66□□□□□ -0.22
LIG3-204ENST00000585740 BARGINQ6ZT62 677 aa13.66□□□□□ -0.22
LIG3-204ENST00000585740 KIAA1211Q6ZU35 1233 aa13.66□□□□□ -0.22
LIG3-204ENST00000585740 EAF2Q96CJ1 260 aaPredicted RBP13.66□□□□□ -0.22
LIG3-204ENST00000585740 ZBTB3Q9H5J0 574 aa13.66□□□□□ -0.22
LIG3-204ENST00000585740 GPR108Q9NPR9 543 aa13.66□□□□□ -0.22
LIG3-204ENST00000585740 FBXO3Q9UK99 471 aa13.66□□□□□ -0.22
LIG3-204ENST00000585740 SPATA31A5Q5VU36 1347 aa13.65□□□□□ -0.22
LIG3-204ENST00000585740 MAP3K15Q6ZN16 1313 aa13.65□□□□□ -0.22
LIG3-204ENST00000585740 SPATA31A7Q8IWB4 1347 aa13.65□□□□□ -0.22
LIG3-204ENST00000585740 RAD50Q92878 1312 aa13.65□□□□□ -0.22
LIG3-204ENST00000585740 FRAT2O75474 233 aaPredicted RBP13.65□□□□□ -0.22
LIG3-204ENST00000585740 FOXO4P98177 505 aa13.65□□□□□ -0.22
LIG3-204ENST00000585740 LMBR1LQ6UX01 489 aa13.65□□□□□ -0.22
LIG3-204ENST00000585740 TICAM2Q86XR7 235 aa13.65□□□□□ -0.22
LIG3-204ENST00000585740 SPRYD3Q8NCJ5 442 aa13.65□□□□□ -0.22
LIG3-204ENST00000585740 SIL1Q9H173 461 aa13.65□□□□□ -0.22
LIG3-204ENST00000585740 RFX7Q2KHR2 1363 aa13.64□□□□□ -0.23
LIG3-204ENST00000585740 DCAF8L1A6NGE4 600 aa13.64□□□□□ -0.23
LIG3-204ENST00000585740 MAP4K4O95819 1239 aaPredicted RBP13.64□□□□□ -0.23
LIG3-204ENST00000585740 APBA3O96018 575 aa13.64□□□□□ -0.23
LIG3-204ENST00000585740 PCCAP05165 728 aaPredicted RBP13.64□□□□□ -0.23
LIG3-204ENST00000585740 PTMSP20962 102 aa13.64□□□□□ -0.23
LIG3-204ENST00000585740 HSPA4P34932 840 aa13.64□□□□□ -0.23
LIG3-204ENST00000585740 IL15P40933 162 aaPredicted RBP13.64□□□□□ -0.23
LIG3-204ENST00000585740 TNNI3KQ59H18 835 aa13.64□□□□□ -0.23
LIG3-204ENST00000585740 PLA2G12BQ9BX93 195 aa13.64□□□□□ -0.23
LIG3-204ENST00000585740 CWC22Q9HCG8 908 aaKnown RBP13.64□□□□□ -0.23
LIG3-204ENST00000585740 PPP1R1BQ9UD71 204 aaPredicted RBP13.64□□□□□ -0.23
LIG3-204ENST00000585740 FPGT-TNNI3KV9GXZ4 949 aa13.64□□□□□ -0.23
LIG3-204ENST00000585740 MYH3P11055 1940 aa13.64□□□□□ -0.23
LIG3-204ENST00000585740 NUP98P52948 1817 aa13.64□□□□□ -0.23
LIG3-204ENST00000585740 TNS1Q9HBL0 1735 aaKnown RBP13.64□□□□□ -0.23
LIG3-204ENST00000585740 ERVV-1B6SEH8 477 aa13.63□□□□□ -0.23
LIG3-204ENST00000585740 CIAO1O76071 339 aa13.63□□□□□ -0.23
LIG3-204ENST00000585740 CYP19A1P11511 503 aaPredicted RBP13.63□□□□□ -0.23
LIG3-204ENST00000585740 ATP5JP18859 108 aa13.63□□□□□ -0.23
LIG3-204ENST00000585740 IL6STP40189 918 aaPredicted RBP13.63□□□□□ -0.23
LIG3-204ENST00000585740 GIGYF2Q6Y7W6 1299 aaKnown RBP13.63□□□□□ -0.23
LIG3-204ENST00000585740 FAM196AQ6ZSG2 479 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms