RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 NPHP1O15259 732 aa16.21■□□□□ 0.19
TRIM47-202ENST00000585333 PCCAP05165 728 aaPredicted RBP16.21■□□□□ 0.19
TRIM47-202ENST00000585333 GYS1P13807 737 aa16.21■□□□□ 0.19
TRIM47-202ENST00000585333 CWF19L2Q2TBE0 894 aaKnown RBP16.21■□□□□ 0.19
TRIM47-202ENST00000585333 TPTE2Q6XPS3 522 aa16.21■□□□□ 0.19
TRIM47-202ENST00000585333 COL23A1Q86Y22 540 aaPredicted RBP16.21■□□□□ 0.19
TRIM47-202ENST00000585333 ANO8Q9HCE9 1232 aaPredicted RBP16.21■□□□□ 0.19
TRIM47-202ENST00000585333 CDHR2Q9BYE9 1310 aa16.2■□□□□ 0.18
TRIM47-202ENST00000585333 ATP5J2-PTCD1G3V325 749 aa16.2■□□□□ 0.18
TRIM47-202ENST00000585333 GTF2E1P29083 439 aaPredicted RBP16.2■□□□□ 0.18
TRIM47-202ENST00000585333 USP44Q9H0E7 712 aa16.2■□□□□ 0.18
TRIM47-202ENST00000585333 ZBTB40Q9NUA8 1239 aa16.2■□□□□ 0.18
TRIM47-202ENST00000585333 SRP68Q9UHB9 627 aaKnown RBP16.2■□□□□ 0.18
TRIM47-202ENST00000585333 TRMT112Q9UI30 125 aaKnown RBP16.2■□□□□ 0.18
TRIM47-202ENST00000585333 TNNQ9UQP3 1299 aa16.2■□□□□ 0.18
TRIM47-202ENST00000585333 SH3TC1Q8TE82 1336 aa16.19■□□□□ 0.18
TRIM47-202ENST00000585333 AFDNP55196 1824 aaKnown RBP16.19■□□□□ 0.18
TRIM47-202ENST00000585333 HMMRO75330 724 aa16.19■□□□□ 0.18
TRIM47-202ENST00000585333 GPTP24298 496 aa16.19■□□□□ 0.18
TRIM47-202ENST00000585333 NBPF5PQ86XG9 351 aaPredicted RBP16.19■□□□□ 0.18
TRIM47-202ENST00000585333 H7C1W4 665 aa16.18■□□□□ 0.18
TRIM47-202ENST00000585333 RPAP2Q8IXW5 612 aaPredicted RBP16.18■□□□□ 0.18
TRIM47-202ENST00000585333 EXOC6Q8TAG9 804 aa16.18■□□□□ 0.18
TRIM47-202ENST00000585333 BCL2L12Q9HB09 334 aa16.18■□□□□ 0.18
TRIM47-202ENST00000585333 TUBGCP6Q96RT7 1819 aa16.17■□□□□ 0.18
TRIM47-202ENST00000585333 IRX6P78412 446 aaPredicted RBP16.17■□□□□ 0.18
TRIM47-202ENST00000585333 ST5P78524 1137 aa16.17■□□□□ 0.18
TRIM47-202ENST00000585333 TBC1D9BQ66K14 1250 aa16.17■□□□□ 0.18
TRIM47-202ENST00000585333 UBE3BQ7Z3V4 1068 aa16.17■□□□□ 0.18
TRIM47-202ENST00000585333 MEIS3Q99687 375 aa16.17■□□□□ 0.18
TRIM47-202ENST00000585333 PARP3Q9Y6F1 533 aa16.17■□□□□ 0.18
TRIM47-202ENST00000585333 AMIGO3Q86WK7 504 aa16.16■□□□□ 0.18
TRIM47-202ENST00000585333 CNBD1Q8NA66 436 aa16.16■□□□□ 0.18
TRIM47-202ENST00000585333 PLA2G12BQ9BX93 195 aa16.16■□□□□ 0.18
TRIM47-202ENST00000585333 PPP4R2Q9NY27 417 aa16.16■□□□□ 0.18
TRIM47-202ENST00000585333 UBN2Q6ZU65 1347 aa16.16■□□□□ 0.18
TRIM47-202ENST00000585333 TM4SF1P30408 202 aa16.15■□□□□ 0.18
TRIM47-202ENST00000585333 NFIXQ14938 502 aa16.15■□□□□ 0.18
TRIM47-202ENST00000585333 COL24A1Q17RW2 1714 aa16.15■□□□□ 0.18
TRIM47-202ENST00000585333 RIC1Q4ADV7 1423 aa16.15■□□□□ 0.18
TRIM47-202ENST00000585333 BICDL1Q6ZP65 573 aa16.15■□□□□ 0.18
TRIM47-202ENST00000585333 PDZRN3Q9UPQ7 1066 aa16.15■□□□□ 0.18
TRIM47-202ENST00000585333 IRS4O14654 1257 aaPredicted RBP16.14■□□□□ 0.17
TRIM47-202ENST00000585333 PDE8AO60658 829 aa16.14■□□□□ 0.17
TRIM47-202ENST00000585333 NTSR2O95665 410 aa16.14■□□□□ 0.17
TRIM47-202ENST00000585333 NBPF7P0C2Y1 421 aaPredicted RBP16.14■□□□□ 0.17
TRIM47-202ENST00000585333 POLD1P28340 1107 aa16.14■□□□□ 0.17
TRIM47-202ENST00000585333 SUSD4Q5VX71 490 aa16.14■□□□□ 0.17
TRIM47-202ENST00000585333 MTFR1LQ9H019 292 aa16.14■□□□□ 0.17
TRIM47-202ENST00000585333 RWDD1Q9H446 243 aaPredicted RBP16.14■□□□□ 0.17
TRIM47-202ENST00000585333 SERPINB2P05120 415 aa16.13■□□□□ 0.17
TRIM47-202ENST00000585333 MTX1Q13505 466 aa16.13■□□□□ 0.17
TRIM47-202ENST00000585333 SLC10A5Q5PT55 438 aa16.13■□□□□ 0.17
TRIM47-202ENST00000585333 LRRFIP2Q9Y608 721 aaKnown RBP16.13■□□□□ 0.17
TRIM47-202ENST00000585333 ANKRD44Q8N8A2 993 aa16.12■□□□□ 0.17
TRIM47-202ENST00000585333 FAM89AQ96GI7 184 aa16.12■□□□□ 0.17
TRIM47-202ENST00000585333 CCDC136Q96JN2 1154 aa16.12■□□□□ 0.17
TRIM47-202ENST00000585333 NLRP3Q96P20 1036 aa16.12■□□□□ 0.17
TRIM47-202ENST00000585333 POLRMTO00411 1230 aaKnown RBP16.11■□□□□ 0.17
TRIM47-202ENST00000585333 MMP10P09238 476 aa16.11■□□□□ 0.17
TRIM47-202ENST00000585333 CASP7P55210 303 aa16.11■□□□□ 0.17
TRIM47-202ENST00000585333 HDAC1Q13547 482 aaPredicted RBP16.11■□□□□ 0.17
TRIM47-202ENST00000585333 R3HDM1Q15032 1099 aaKnown RBP16.11■□□□□ 0.17
TRIM47-202ENST00000585333 RABL6Q3YEC7 729 aaPredicted RBP16.11■□□□□ 0.17
TRIM47-202ENST00000585333 CCDC152Q4G0S7 254 aa16.11■□□□□ 0.17
TRIM47-202ENST00000585333 HSP90AB4PQ58FF6 505 aa16.11■□□□□ 0.17
TRIM47-202ENST00000585333 SMIM5Q71RC9 77 aa16.11■□□□□ 0.17
TRIM47-202ENST00000585333 CTSWP56202 376 aa16.1■□□□□ 0.17
TRIM47-202ENST00000585333 ATP8B2P98198 1209 aa16.1■□□□□ 0.17
TRIM47-202ENST00000585333 CEP85Q6P2H3 762 aa16.1■□□□□ 0.17
TRIM47-202ENST00000585333 SUCLG2Q96I99 432 aa16.1■□□□□ 0.17
TRIM47-202ENST00000585333 RTL9Q8NET4 1388 aa16.1■□□□□ 0.17
TRIM47-202ENST00000585333 LAMB2P55268 1798 aa16.1■□□□□ 0.17
TRIM47-202ENST00000585333 FAM177BA6PVY3 158 aa16.09■□□□□ 0.17
TRIM47-202ENST00000585333 PDE6BP35913 854 aa16.09■□□□□ 0.17
TRIM47-202ENST00000585333 CCDC57Q2TAC2 916 aa16.09■□□□□ 0.17
TRIM47-202ENST00000585333 BICC1Q9H694 974 aaKnown RBP16.09■□□□□ 0.17
TRIM47-202ENST00000585333 ZBTB47Q9UFB7 747 aaPredicted RBP16.09■□□□□ 0.17
TRIM47-202ENST00000585333 FBXO3Q9UK99 471 aa16.09■□□□□ 0.17
TRIM47-202ENST00000585333 GTF3C3Q9Y5Q9 886 aa16.09■□□□□ 0.17
TRIM47-202ENST00000585333 SRGAP3O43295 1099 aa16.08■□□□□ 0.16
TRIM47-202ENST00000585333 IFIT5Q13325 482 aaKnown RBP16.08■□□□□ 0.16
TRIM47-202ENST00000585333 PRR5LQ6MZQ0 368 aa16.08■□□□□ 0.16
TRIM47-202ENST00000585333 GCC1Q96CN9 775 aa16.08■□□□□ 0.16
TRIM47-202ENST00000585333 CDC5LQ99459 802 aaKnown RBP16.08■□□□□ 0.16
TRIM47-202ENST00000585333 BRIP1Q9BX63 1249 aa16.08■□□□□ 0.16
TRIM47-202ENST00000585333 CASZ1Q86V15 1759 aa16.08■□□□□ 0.16
TRIM47-202ENST00000585333 CSF1RP07333 972 aa16.07■□□□□ 0.16
TRIM47-202ENST00000585333 DDR1Q08345 913 aa16.07■□□□□ 0.16
TRIM47-202ENST00000585333 SF3B3Q15393 1217 aaKnown RBP16.07■□□□□ 0.16
TRIM47-202ENST00000585333 ERFEQ4G0M1 354 aa16.07■□□□□ 0.16
TRIM47-202ENST00000585333 TAF7LQ5H9L4 462 aa16.07■□□□□ 0.16
TRIM47-202ENST00000585333 RTL5Q5HYW3 569 aaPredicted RBP16.07■□□□□ 0.16
TRIM47-202ENST00000585333 LMBR1LQ6UX01 489 aa16.07■□□□□ 0.16
TRIM47-202ENST00000585333 CENPQQ7L2Z9 268 aaPredicted RBP16.07■□□□□ 0.16
TRIM47-202ENST00000585333 SSH3Q8TE77 659 aa16.07■□□□□ 0.16
TRIM47-202ENST00000585333 C1orf115Q9H7X2 142 aa16.07■□□□□ 0.16
TRIM47-202ENST00000585333 CHMP3Q9Y3E7 222 aa16.07■□□□□ 0.16
TRIM47-202ENST00000585333 NRXN2Q9P2S2 1712 aa16.06■□□□□ 0.16
TRIM47-202ENST00000585333 ANKRD18BA2A2Z9 1011 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms