RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 CNGB1Q14028 1251 aaPredicted RBP13.71□□□□□ -0.21
GGA3-219ENST00000584550 SLC51AQ86UW1 340 aa13.71□□□□□ -0.21
GGA3-219ENST00000584550 KIF7Q2M1P5 1343 aa13.7□□□□□ -0.22
GGA3-219ENST00000584550 CELF2O95319 508 aaKnown RBP13.7□□□□□ -0.22
GGA3-219ENST00000584550 HLFQ16534 295 aa13.7□□□□□ -0.22
GGA3-219ENST00000584550 AMER1Q5JTC6 1135 aaPredicted RBP13.7□□□□□ -0.22
GGA3-219ENST00000584550 USP50Q70EL3 339 aaPredicted RBP13.7□□□□□ -0.22
GGA3-219ENST00000584550 LARGE2Q8N3Y3 721 aa13.7□□□□□ -0.22
GGA3-219ENST00000584550 PSMD1Q99460 953 aa13.7□□□□□ -0.22
GGA3-219ENST00000584550 ZNF408Q9H9D4 720 aa13.7□□□□□ -0.22
GGA3-219ENST00000584550 CC2D1BQ5T0F9 858 aaKnown RBP13.69□□□□□ -0.22
GGA3-219ENST00000584550 SAPCD2Q86UD0 394 aa13.69□□□□□ -0.22
GGA3-219ENST00000584550 NUTM1Q86Y26 1132 aa13.69□□□□□ -0.22
GGA3-219ENST00000584550 GAS2L2Q8NHY3 880 aa13.69□□□□□ -0.22
GGA3-219ENST00000584550 NBPF26B4DH59 902 aa13.68□□□□□ -0.22
GGA3-219ENST00000584550 CIAPIN1Q6FI81 312 aa13.68□□□□□ -0.22
GGA3-219ENST00000584550 NBPF10Q6P3W6 841 aaKnown RBP13.68□□□□□ -0.22
GGA3-219ENST00000584550 NGEFQ8N5V2 710 aa13.68□□□□□ -0.22
GGA3-219ENST00000584550 NBPF15Q8N660 670 aa13.68□□□□□ -0.22
GGA3-219ENST00000584550 SNED1Q8TER0 1413 aa13.67□□□□□ -0.22
GGA3-219ENST00000584550 CA12O43570 354 aa13.67□□□□□ -0.22
GGA3-219ENST00000584550 RPGRQ92834 1020 aaKnown RBP13.67□□□□□ -0.22
GGA3-219ENST00000584550 GLIS2Q9BZE0 524 aaPredicted RBP13.67□□□□□ -0.22
GGA3-219ENST00000584550 SNRPA1P09661 255 aaKnown RBP13.66□□□□□ -0.22
GGA3-219ENST00000584550 BRPF1P55201 1214 aaPredicted RBP13.66□□□□□ -0.22
GGA3-219ENST00000584550 SOX10P56693 466 aa13.66□□□□□ -0.22
GGA3-219ENST00000584550 NIM1KQ8IY84 436 aa13.66□□□□□ -0.22
GGA3-219ENST00000584550 PHACTR3Q96KR7 559 aa13.66□□□□□ -0.22
GGA3-219ENST00000584550 ZIC5Q96T25 663 aa13.66□□□□□ -0.22
GGA3-219ENST00000584550 ADARB2Q9NS39 739 aaKnown RBP13.66□□□□□ -0.22
GGA3-219ENST00000584550 ABCC12Q96J65 1359 aa13.66□□□□□ -0.22
GGA3-219ENST00000584550 AOC3Q16853 763 aa13.65□□□□□ -0.22
GGA3-219ENST00000584550 CC2D2BQ6DHV5 1058 aa13.65□□□□□ -0.22
GGA3-219ENST00000584550 GPRC5DQ9NZD1 345 aa13.65□□□□□ -0.22
GGA3-219ENST00000584550 CEMIPQ8WUJ3 1361 aa13.65□□□□□ -0.22
GGA3-219ENST00000584550 PPIP5K2O43314 1243 aa13.64□□□□□ -0.23
GGA3-219ENST00000584550 CRY2Q49AN0 593 aa13.64□□□□□ -0.23
GGA3-219ENST00000584550 MCM10Q7L590 875 aa13.64□□□□□ -0.23
GGA3-219ENST00000584550 PPEF1O14829 653 aaPredicted RBP13.63□□□□□ -0.23
GGA3-219ENST00000584550 GPTP24298 496 aa13.63□□□□□ -0.23
GGA3-219ENST00000584550 GMPSP49915 693 aaPredicted RBP13.63□□□□□ -0.23
GGA3-219ENST00000584550 DLK2Q6UY11 383 aa13.63□□□□□ -0.23
GGA3-219ENST00000584550 NYXQ9GZU5 481 aa13.63□□□□□ -0.23
GGA3-219ENST00000584550 PRKAR2BP31323 418 aa13.62□□□□□ -0.23
GGA3-219ENST00000584550 ZEB1P37275 1124 aaPredicted RBP13.62□□□□□ -0.23
GGA3-219ENST00000584550 CXCL9Q07325 125 aa13.62□□□□□ -0.23
GGA3-219ENST00000584550 DCTN1Q14203 1278 aa13.62□□□□□ -0.23
GGA3-219ENST00000584550 RBM17Q96I25 401 aaKnown RBP13.62□□□□□ -0.23
GGA3-219ENST00000584550 PDE4DIPQ5VU43 2346 aa13.62□□□□□ -0.23
GGA3-219ENST00000584550 NPC1L1Q9UHC9 1359 aa13.61□□□□□ -0.23
GGA3-219ENST00000584550 HOXA10P31260 410 aaPredicted RBP13.61□□□□□ -0.23
GGA3-219ENST00000584550 HIRAP54198 1017 aaPredicted RBP13.61□□□□□ -0.23
GGA3-219ENST00000584550 C3orf67Q6ZVT6 689 aa13.61□□□□□ -0.23
GGA3-219ENST00000584550 HHIPL1Q96JK4 782 aa13.61□□□□□ -0.23
GGA3-219ENST00000584550 BCL2L13Q9BXK5 485 aa13.61□□□□□ -0.23
GGA3-219ENST00000584550 MIS18AQ9NYP9 233 aa13.61□□□□□ -0.23
GGA3-219ENST00000584550 SHTN1A0MZ66 631 aa13.6□□□□□ -0.23
GGA3-219ENST00000584550 RAD17O75943 681 aa13.6□□□□□ -0.23
GGA3-219ENST00000584550 HUNKP57058 714 aa13.6□□□□□ -0.23
GGA3-219ENST00000584550 GRIPAP1Q4V328 841 aa13.6□□□□□ -0.23
GGA3-219ENST00000584550 SUSD4Q5VX71 490 aa13.6□□□□□ -0.23
GGA3-219ENST00000584550 USP48Q86UV5 1035 aa13.6□□□□□ -0.23
GGA3-219ENST00000584550 RTF1Q92541 710 aaKnown RBP13.6□□□□□ -0.23
GGA3-219ENST00000584550 ZNRF3Q9ULT6 936 aa13.6□□□□□ -0.23
GGA3-219ENST00000584550 COL3A1P02461 1466 aaPredicted RBP13.6□□□□□ -0.23
GGA3-219ENST00000584550 NUP98P52948 1817 aa13.6□□□□□ -0.23
GGA3-219ENST00000584550 RGL2O15211 777 aa13.59□□□□□ -0.23
GGA3-219ENST00000584550 NOGQ13253 232 aa13.59□□□□□ -0.23
GGA3-219ENST00000584550 TTLL7Q6ZT98 887 aa13.59□□□□□ -0.23
GGA3-219ENST00000584550 CDC37L1Q7L3B6 337 aa13.59□□□□□ -0.23
GGA3-219ENST00000584550 TRPM4Q8TD43 1214 aa13.59□□□□□ -0.23
GGA3-219ENST00000584550 CRAMP1Q96RY5 1269 aa13.59□□□□□ -0.23
GGA3-219ENST00000584550 TMX4Q9H1E5 349 aaPredicted RBP13.59□□□□□ -0.23
GGA3-219ENST00000584550 ZBTB3Q9H5J0 574 aa13.59□□□□□ -0.23
GGA3-219ENST00000584550 PGAP2Q9UHJ9 254 aa13.59□□□□□ -0.23
GGA3-219ENST00000584550 RRP7AQ9Y3A4 280 aaKnown RBP13.59□□□□□ -0.23
GGA3-219ENST00000584550 UBN2Q6ZU65 1347 aa13.59□□□□□ -0.23
GGA3-219ENST00000584550 PER1O15534 1290 aaPredicted RBP13.58□□□□□ -0.24
GGA3-219ENST00000584550 TRPA1O75762 1119 aa13.58□□□□□ -0.24
GGA3-219ENST00000584550 MYL6BP14649 208 aa13.58□□□□□ -0.24
GGA3-219ENST00000584550 RSPH6AQ9H0K4 717 aa13.58□□□□□ -0.24
GGA3-219ENST00000584550 CNOT7Q9UIV1 285 aaKnown RBP13.58□□□□□ -0.24
GGA3-219ENST00000584550 KIF6Q6ZMV9 814 aa13.57□□□□□ -0.24
GGA3-219ENST00000584550 ATP6V0A2Q9Y487 856 aa13.57□□□□□ -0.24
GGA3-219ENST00000584550 MAP3K15Q6ZN16 1313 aa13.57□□□□□ -0.24
GGA3-219ENST00000584550 ERVV-1B6SEH8 477 aa13.56□□□□□ -0.24
GGA3-219ENST00000584550 KIF23Q02241 960 aaPredicted RBP13.56□□□□□ -0.24
GGA3-219ENST00000584550 RGMBQ6NW40 437 aa13.56□□□□□ -0.24
GGA3-219ENST00000584550 DPP8Q6V1X1 898 aaPredicted RBP13.56□□□□□ -0.24
GGA3-219ENST00000584550 ZC3H15Q8WU90 426 aaKnown RBP13.56□□□□□ -0.24
GGA3-219ENST00000584550 RNF186Q9NXI6 227 aa13.56□□□□□ -0.24
GGA3-219ENST00000584550 RIC1Q4ADV7 1423 aa13.56□□□□□ -0.24
GGA3-219ENST00000584550 FAM155AB1AL88 458 aaPredicted RBP13.55□□□□□ -0.24
GGA3-219ENST00000584550 H7C1D1 291 aa13.55□□□□□ -0.24
GGA3-219ENST00000584550 NTSR2O95665 410 aa13.55□□□□□ -0.24
GGA3-219ENST00000584550 TNIP1Q15025 636 aa13.55□□□□□ -0.24
GGA3-219ENST00000584550 PRPF38BQ5VTL8 546 aaKnown RBP13.55□□□□□ -0.24
GGA3-219ENST00000584550 SAMD7Q7Z3H4 446 aa13.55□□□□□ -0.24
GGA3-219ENST00000584550 MICALL2Q8IY33 904 aa13.55□□□□□ -0.24
GGA3-219ENST00000584550 SUPT20HQ8NEM7 779 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms