RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 GCKRQ14397 625 aa23.08■■□□□ 1.29
RFFL-211ENST00000584541 C9orf78Q9NZ63 289 aaPredicted RBP23.08■■□□□ 1.29
RFFL-211ENST00000584541 CARMIL3Q8ND23 1372 aa23.08■■□□□ 1.29
RFFL-211ENST00000584541 UBN2Q6ZU65 1347 aa23.08■■□□□ 1.28
RFFL-211ENST00000584541 PSDA5PKW4 1024 aaPredicted RBP23.07■■□□□ 1.28
RFFL-211ENST00000584541 NFIXQ14938 502 aa23.07■■□□□ 1.28
RFFL-211ENST00000584541 SRCAPQ6ZRS2 3230 aa23.06■■□□□ 1.28
RFFL-211ENST00000584541 IRX6P78412 446 aaPredicted RBP23.06■■□□□ 1.28
RFFL-211ENST00000584541 MSL1Q68DK7 614 aa23.06■■□□□ 1.28
RFFL-211ENST00000584541 CRBNQ96SW2 442 aa23.06■■□□□ 1.28
RFFL-211ENST00000584541 PDGFDQ9GZP0 370 aaPredicted RBP23.06■■□□□ 1.28
RFFL-211ENST00000584541 NYXQ9GZU5 481 aa23.06■■□□□ 1.28
RFFL-211ENST00000584541 GRM8O00222 908 aa23.05■■□□□ 1.28
RFFL-211ENST00000584541 TM4SF1P30408 202 aa23.05■■□□□ 1.28
RFFL-211ENST00000584541 UTP14AQ9BVJ6 771 aaKnown RBP23.05■■□□□ 1.28
RFFL-211ENST00000584541 TRMT112Q9UI30 125 aaKnown RBP23.05■■□□□ 1.28
RFFL-211ENST00000584541 HDAC5Q9UQL6 1122 aa23.05■■□□□ 1.28
RFFL-211ENST00000584541 FAM177BA6PVY3 158 aa23.04■■□□□ 1.28
RFFL-211ENST00000584541 NPHP1O15259 732 aa23.04■■□□□ 1.28
RFFL-211ENST00000584541 GNAI3P08754 354 aa23.04■■□□□ 1.28
RFFL-211ENST00000584541 SUSD4Q5VX71 490 aa23.04■■□□□ 1.28
RFFL-211ENST00000584541 NBPF5PQ86XG9 351 aaPredicted RBP23.04■■□□□ 1.28
RFFL-211ENST00000584541 PCCAP05165 728 aaPredicted RBP23.03■■□□□ 1.28
RFFL-211ENST00000584541 GTF2E1P29083 439 aaPredicted RBP23.03■■□□□ 1.28
RFFL-211ENST00000584541 TPTE2Q6XPS3 522 aa23.03■■□□□ 1.28
RFFL-211ENST00000584541 ZBTB38Q8NAP3 1195 aaPredicted RBP23.03■■□□□ 1.28
RFFL-211ENST00000584541 MTFR1LQ9H019 292 aa23.03■■□□□ 1.28
RFFL-211ENST00000584541 USP44Q9H0E7 712 aa23.03■■□□□ 1.28
RFFL-211ENST00000584541 PARP3Q9Y6F1 533 aa23.03■■□□□ 1.28
RFFL-211ENST00000584541 ZBTB7BO15156 539 aaPredicted RBP23.02■■□□□ 1.28
RFFL-211ENST00000584541 MMP10P09238 476 aa23.02■■□□□ 1.28
RFFL-211ENST00000584541 UBTFL1P0CB47 393 aaPredicted RBP23.02■■□□□ 1.28
RFFL-211ENST00000584541 UBE3BQ7Z3V4 1068 aa23.02■■□□□ 1.28
RFFL-211ENST00000584541 SH3TC1Q8TE82 1336 aa23.02■■□□□ 1.28
RFFL-211ENST00000584541 H7C1W4 665 aa23.01■■□□□ 1.27
RFFL-211ENST00000584541 NTSR2O95665 410 aa23.01■■□□□ 1.27
RFFL-211ENST00000584541 SERPINB2P05120 415 aa23.01■■□□□ 1.27
RFFL-211ENST00000584541 HSP90B1P14625 803 aaKnown RBP23.01■■□□□ 1.27
RFFL-211ENST00000584541 MEIS3Q99687 375 aa23.01■■□□□ 1.27
RFFL-211ENST00000584541 UTYO14607 1347 aa23.01■■□□□ 1.27
RFFL-211ENST00000584541 LAMB2P55268 1798 aa23.01■■□□□ 1.27
RFFL-211ENST00000584541 MYH3P11055 1940 aa23■■□□□ 1.27
RFFL-211ENST00000584541 NRXN2Q9P2S2 1712 aa23■■□□□ 1.27
RFFL-211ENST00000584541 POLRMTO00411 1230 aaKnown RBP23■■□□□ 1.27
RFFL-211ENST00000584541 ZBTB7AO95365 584 aa23■■□□□ 1.27
RFFL-211ENST00000584541 RTL5Q5HYW3 569 aaPredicted RBP23■■□□□ 1.27
RFFL-211ENST00000584541 FAM89AQ96GI7 184 aa23■■□□□ 1.27
RFFL-211ENST00000584541 NBPF7P0C2Y1 421 aaPredicted RBP22.99■■□□□ 1.27
RFFL-211ENST00000584541 DDR1Q08345 913 aa22.99■■□□□ 1.27
RFFL-211ENST00000584541 AAMPQ13685 434 aa22.99■■□□□ 1.27
RFFL-211ENST00000584541 CNBD1Q8NA66 436 aa22.99■■□□□ 1.27
RFFL-211ENST00000584541 CDHR2Q9BYE9 1310 aa22.99■■□□□ 1.27
RFFL-211ENST00000584541 POLD1P28340 1107 aa22.98■■□□□ 1.27
RFFL-211ENST00000584541 ST5P78524 1137 aa22.98■■□□□ 1.27
RFFL-211ENST00000584541 EXOC6Q8TAG9 804 aa22.98■■□□□ 1.27
RFFL-211ENST00000584541 DDX60Q8IY21 1712 aaKnown RBP22.97■■□□□ 1.27
RFFL-211ENST00000584541 GNAI2P04899 355 aa22.97■■□□□ 1.27
RFFL-211ENST00000584541 NUTM1Q86Y26 1132 aa22.97■■□□□ 1.27
RFFL-211ENST00000584541 JARID2Q92833 1246 aaPredicted RBP22.97■■□□□ 1.27
RFFL-211ENST00000584541 ZBTB40Q9NUA8 1239 aa22.97■■□□□ 1.27
RFFL-211ENST00000584541 IRS4O14654 1257 aaPredicted RBP22.96■■□□□ 1.27
RFFL-211ENST00000584541 CASP7P55210 303 aa22.96■■□□□ 1.27
RFFL-211ENST00000584541 ATF5Q9Y2D1 282 aaPredicted RBP22.96■■□□□ 1.27
RFFL-211ENST00000584541 ERFEQ4G0M1 354 aa22.95■■□□□ 1.26
RFFL-211ENST00000584541 PRR5LQ6MZQ0 368 aa22.95■■□□□ 1.26
RFFL-211ENST00000584541 LRRFIP2Q9Y608 721 aaKnown RBP22.94■■□□□ 1.26
RFFL-211ENST00000584541 PDE8AO60658 829 aa22.93■■□□□ 1.26
RFFL-211ENST00000584541 SLC10A5Q5PT55 438 aa22.93■■□□□ 1.26
RFFL-211ENST00000584541 SYNE4Q8N205 404 aa22.93■■□□□ 1.26
RFFL-211ENST00000584541 SUCLG2Q96I99 432 aa22.93■■□□□ 1.26
RFFL-211ENST00000584541 PLA2G12BQ9BX93 195 aa22.92■■□□□ 1.26
RFFL-211ENST00000584541 C1orf115Q9H7X2 142 aa22.92■■□□□ 1.26
RFFL-211ENST00000584541 RIC1Q4ADV7 1423 aa22.91■■□□□ 1.26
RFFL-211ENST00000584541 ABCC12Q96J65 1359 aa22.91■■□□□ 1.26
RFFL-211ENST00000584541 HCLS1P14317 486 aaPredicted RBP22.91■■□□□ 1.26
RFFL-211ENST00000584541 NLRP3Q96P20 1036 aa22.91■■□□□ 1.26
RFFL-211ENST00000584541 SPON1Q9HCB6 807 aa22.91■■□□□ 1.26
RFFL-211ENST00000584541 ERICH6BQ5W0A0 696 aa22.9■■□□□ 1.26
RFFL-211ENST00000584541 CCDC24Q8N4L8 307 aa22.9■■□□□ 1.26
RFFL-211ENST00000584541 BICC1Q9H694 974 aaKnown RBP22.9■■□□□ 1.26
RFFL-211ENST00000584541 ANKRD31Q8N7Z5 1873 aa22.9■■□□□ 1.26
RFFL-211ENST00000584541 TNRC6CQ9HCJ0 1690 aaKnown RBP22.88■■□□□ 1.25
RFFL-211ENST00000584541 CTSWP56202 376 aa22.88■■□□□ 1.25
RFFL-211ENST00000584541 FOXO4P98177 505 aa22.88■■□□□ 1.25
RFFL-211ENST00000584541 KAZALD1Q96I82 304 aa22.88■■□□□ 1.25
RFFL-211ENST00000584541 BRIP1Q9BX63 1249 aa22.88■■□□□ 1.25
RFFL-211ENST00000584541 EPHA10Q5JZY3 1008 aa22.87■■□□□ 1.25
RFFL-211ENST00000584541 RPAP2Q8IXW5 612 aaPredicted RBP22.87■■□□□ 1.25
RFFL-211ENST00000584541 CHMP3Q9Y3E7 222 aa22.87■■□□□ 1.25
RFFL-211ENST00000584541 KIF13BQ9NQT8 1826 aa22.87■■□□□ 1.25
RFFL-211ENST00000584541 PDE6BP35913 854 aa22.86■■□□□ 1.25
RFFL-211ENST00000584541 RABL6Q3YEC7 729 aaPredicted RBP22.86■■□□□ 1.25
RFFL-211ENST00000584541 CCDC152Q4G0S7 254 aa22.86■■□□□ 1.25
RFFL-211ENST00000584541 LMBR1LQ6UX01 489 aa22.86■■□□□ 1.25
RFFL-211ENST00000584541 PTGER2P43116 358 aa22.85■■□□□ 1.25
RFFL-211ENST00000584541 CEP85Q6P2H3 762 aa22.85■■□□□ 1.25
RFFL-211ENST00000584541 ANKRD44Q8N8A2 993 aa22.85■■□□□ 1.25
RFFL-211ENST00000584541 TTLL11Q8NHH1 800 aa22.85■■□□□ 1.25
RFFL-211ENST00000584541 SGIP1Q9BQI5 828 aa22.85■■□□□ 1.25
RFFL-211ENST00000584541 C10orf71Q711Q0 1435 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms