RNA–Protein interactions for RNA: ENST00000584506.1

CDH8-212, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-212ENST00000584506 SMARCC1Q92922 1105 aaPredicted RBP8.43□□□□□ -1.06
CDH8-212ENST00000584506 SYTL4Q96C24 671 aaPredicted RBP8.43□□□□□ -1.06
CDH8-212ENST00000584506 USP16Q9Y5T5 823 aa8.43□□□□□ -1.06
CDH8-212ENST00000584506 PXDNLA1KZ92 1463 aa8.43□□□□□ -1.06
CDH8-212ENST00000584506 KCPQ6ZWJ8 1503 aa8.43□□□□□ -1.06
CDH8-212ENST00000584506 SBF2Q86WG5 1849 aa8.43□□□□□ -1.06
CDH8-212ENST00000584506 ZBTB7BO15156 539 aaPredicted RBP8.42□□□□□ -1.06
CDH8-212ENST00000584506 SLC34A2O95436 690 aa8.42□□□□□ -1.06
CDH8-212ENST00000584506 SLC4A10Q6U841 1118 aa8.42□□□□□ -1.06
CDH8-212ENST00000584506 KHSRPQ92945 711 aaKnown RBP eCLIP8.42□□□□□ -1.06
CDH8-212ENST00000584506 RWDD1Q9H446 243 aaPredicted RBP8.42□□□□□ -1.06
CDH8-212ENST00000584506 PHAXQ9H814 394 aaKnown RBP8.42□□□□□ -1.06
CDH8-212ENST00000584506 ATG3Q9NT62 314 aa8.42□□□□□ -1.06
CDH8-212ENST00000584506 ZBTB40Q9NUA8 1239 aa8.42□□□□□ -1.06
CDH8-212ENST00000584506 ASAP1Q9ULH1 1129 aa8.42□□□□□ -1.06
CDH8-212ENST00000584506 RGS12O14924 1447 aa8.42□□□□□ -1.06
CDH8-212ENST00000584506 PRAMEF22A3QJZ6 481 aa8.41□□□□□ -1.06
CDH8-212ENST00000584506 STARD3NLO95772 234 aa8.41□□□□□ -1.06
CDH8-212ENST00000584506 PDIA6Q15084 440 aa8.41□□□□□ -1.06
CDH8-212ENST00000584506 KSR2Q6VAB6 950 aa8.41□□□□□ -1.06
CDH8-212ENST00000584506 PAXIP1Q6ZW49 1069 aaPredicted RBP8.41□□□□□ -1.06
CDH8-212ENST00000584506 HDAC5Q9UQL6 1122 aa8.41□□□□□ -1.06
CDH8-212ENST00000584506 BRWD3Q6RI45 1802 aa8.4□□□□□ -1.06
CDH8-212ENST00000584506 ZNF831Q5JPB2 1677 aa8.4□□□□□ -1.06
CDH8-212ENST00000584506 NHSQ6T4R5 1651 aa8.4□□□□□ -1.06
CDH8-212ENST00000584506 PI4KAP2A4QPH2 592 aa8.4□□□□□ -1.06
CDH8-212ENST00000584506 F6X3S4 739 aa8.4□□□□□ -1.06
CDH8-212ENST00000584506 GNAI3P08754 354 aa8.4□□□□□ -1.06
CDH8-212ENST00000584506 MYL6BP14649 208 aa8.4□□□□□ -1.06
CDH8-212ENST00000584506 PDE4AP27815 886 aa8.4□□□□□ -1.06
CDH8-212ENST00000584506 RIC3Q7Z5B4 369 aa8.4□□□□□ -1.06
CDH8-212ENST00000584506 SEPT12Q8IYM1 358 aa8.4□□□□□ -1.06
CDH8-212ENST00000584506 PI4KAP1Q8N8J0 262 aa8.4□□□□□ -1.06
CDH8-212ENST00000584506 DNAAF4Q8WXU2 420 aa8.4□□□□□ -1.06
CDH8-212ENST00000584506 ACSBG1Q96GR2 724 aa8.4□□□□□ -1.06
CDH8-212ENST00000584506 SRCIN1Q9C0H9 1055 aa8.4□□□□□ -1.06
CDH8-212ENST00000584506 BTAF1O14981 1849 aa8.4□□□□□ -1.07
CDH8-212ENST00000584506 AFDNP55196 1824 aaKnown RBP8.4□□□□□ -1.07
CDH8-212ENST00000584506 CICQ96RK0 1608 aaPredicted RBP8.4□□□□□ -1.07
CDH8-212ENST00000584506 ALDH1L1O75891 902 aa8.39□□□□□ -1.07
CDH8-212ENST00000584506 ANXA1P04083 346 aa8.39□□□□□ -1.07
CDH8-212ENST00000584506 RBM6P78332 1123 aaKnown RBP8.39□□□□□ -1.07
CDH8-212ENST00000584506 NEXNQ0ZGT2 675 aa8.39□□□□□ -1.07
CDH8-212ENST00000584506 AIMP1Q12904 312 aaKnown RBP8.39□□□□□ -1.07
CDH8-212ENST00000584506 HDAC1Q13547 482 aaPredicted RBP8.39□□□□□ -1.07
CDH8-212ENST00000584506 NPM2Q86SE8 214 aaKnown RBP8.39□□□□□ -1.07
CDH8-212ENST00000584506 PCDHB15Q9Y5E8 787 aa8.39□□□□□ -1.07
CDH8-212ENST00000584506 ARFGEF2Q9Y6D5 1785 aa8.39□□□□□ -1.07
CDH8-212ENST00000584506 TJP1Q07157 1748 aa8.39□□□□□ -1.07
CDH8-212ENST00000584506 ATP10DQ9P241 1426 aa8.38□□□□□ -1.07
CDH8-212ENST00000584506 KDM2BQ8NHM5 1336 aa8.38□□□□□ -1.07
CDH8-212ENST00000584506 A1BGP04217 495 aa8.38□□□□□ -1.07
CDH8-212ENST00000584506 PROSER3Q2NL68 480 aa8.38□□□□□ -1.07
CDH8-212ENST00000584506 PPP1R15BQ5SWA1 713 aa8.38□□□□□ -1.07
CDH8-212ENST00000584506 ANKRD13DQ6ZTN6 518 aa8.38□□□□□ -1.07
CDH8-212ENST00000584506 COPS6Q7L5N1 327 aa8.38□□□□□ -1.07
CDH8-212ENST00000584506 DNAJC10Q8IXB1 793 aa8.38□□□□□ -1.07
CDH8-212ENST00000584506 RPAP2Q8IXW5 612 aaPredicted RBP8.38□□□□□ -1.07
CDH8-212ENST00000584506 XAGE3Q8WTP9 111 aa8.38□□□□□ -1.07
CDH8-212ENST00000584506 LARP6Q9BRS8 491 aaKnown RBP8.38□□□□□ -1.07
CDH8-212ENST00000584506 MAP3K2Q9Y2U5 619 aa8.38□□□□□ -1.07
CDH8-212ENST00000584506 PCDHGA4Q9Y5G9 962 aa8.38□□□□□ -1.07
CDH8-212ENST00000584506 ADCY9O60503 1353 aa8.37□□□□□ -1.07
CDH8-212ENST00000584506 LOC102724428A0A0B4J2F2 783 aa8.37□□□□□ -1.07
CDH8-212ENST00000584506 NBPF26B4DH59 902 aa8.37□□□□□ -1.07
CDH8-212ENST00000584506 IGHDP01880 384 aa8.37□□□□□ -1.07
CDH8-212ENST00000584506 GNAI2P04899 355 aa8.37□□□□□ -1.07
CDH8-212ENST00000584506 HMGB2P26583 209 aaKnown RBP8.37□□□□□ -1.07
CDH8-212ENST00000584506 ATP6V1AP38606 617 aa8.37□□□□□ -1.07
CDH8-212ENST00000584506 SIK1P57059 783 aa8.37□□□□□ -1.07
CDH8-212ENST00000584506 MFSD10Q14728 455 aa8.37□□□□□ -1.07
CDH8-212ENST00000584506 BEND3Q5T5X7 828 aa8.37□□□□□ -1.07
CDH8-212ENST00000584506 NBPF14Q5TI25 921 aa8.37□□□□□ -1.07
CDH8-212ENST00000584506 NBPF10Q6P3W6 841 aaKnown RBP8.37□□□□□ -1.07
CDH8-212ENST00000584506 FAM196AQ6ZSG2 479 aa8.37□□□□□ -1.07
CDH8-212ENST00000584506 KRT27Q7Z3Y8 459 aa8.37□□□□□ -1.07
CDH8-212ENST00000584506 NBPF15Q8N660 670 aa8.37□□□□□ -1.07
CDH8-212ENST00000584506 LINS1Q8NG48 757 aa8.37□□□□□ -1.07
CDH8-212ENST00000584506 PLBD2Q8NHP8 589 aa8.37□□□□□ -1.07
CDH8-212ENST00000584506 NUP188Q5SRE5 1749 aa8.37□□□□□ -1.07
CDH8-212ENST00000584506 PALLDQ8WX93 1383 aa8.36□□□□□ -1.07
CDH8-212ENST00000584506 IBTKQ9P2D0 1353 aaPredicted RBP8.36□□□□□ -1.07
CDH8-212ENST00000584506 KCNQ2O43526 872 aa8.36□□□□□ -1.07
CDH8-212ENST00000584506 HMMRO75330 724 aa8.36□□□□□ -1.07
CDH8-212ENST00000584506 NUDT7P0C024 238 aa8.36□□□□□ -1.07
CDH8-212ENST00000584506 UBTFL1P0CB47 393 aaPredicted RBP8.36□□□□□ -1.07
CDH8-212ENST00000584506 CYP19A1P11511 503 aaPredicted RBP8.36□□□□□ -1.07
CDH8-212ENST00000584506 RXRBP28702 533 aa8.36□□□□□ -1.07
CDH8-212ENST00000584506 KIF6Q6ZMV9 814 aa8.36□□□□□ -1.07
CDH8-212ENST00000584506 LRP10Q7Z4F1 713 aa8.36□□□□□ -1.07
CDH8-212ENST00000584506 PTCD2Q8WV60 388 aaKnown RBP8.36□□□□□ -1.07
CDH8-212ENST00000584506 GCC1Q96CN9 775 aa8.36□□□□□ -1.07
CDH8-212ENST00000584506 MEIS3Q99687 375 aa8.36□□□□□ -1.07
CDH8-212ENST00000584506 METTL22Q9BUU2 404 aaPredicted RBP8.36□□□□□ -1.07
CDH8-212ENST00000584506 C9orf78Q9NZ63 289 aaPredicted RBP8.36□□□□□ -1.07
CDH8-212ENST00000584506 LY75O60449 1722 aa8.36□□□□□ -1.07
CDH8-212ENST00000584506 COL5A3P25940 1745 aaPredicted RBP8.36□□□□□ -1.07
CDH8-212ENST00000584506 NUP98P52948 1817 aa8.36□□□□□ -1.07
CDH8-212ENST00000584506 RREB1Q92766 1687 aa8.35□□□□□ -1.07
CDH8-212ENST00000584506 IL6STP40189 918 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms