RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 RNF123Q5XPI4 1314 aa20.39■□□□□ 0.85
CSNK1D-223ENST00000584472 DDX58O95786 925 aaKnown RBP20.39■□□□□ 0.85
CSNK1D-223ENST00000584472 SLC4A2P04920 1241 aa20.39■□□□□ 0.85
CSNK1D-223ENST00000584472 MRPL50Q8N5N7 158 aaKnown RBP20.39■□□□□ 0.85
CSNK1D-223ENST00000584472 TTLL6Q8N841 843 aa20.39■□□□□ 0.85
CSNK1D-223ENST00000584472 BCL2L13Q9BXK5 485 aa20.39■□□□□ 0.85
CSNK1D-223ENST00000584472 SMC4Q9NTJ3 1288 aa20.39■□□□□ 0.85
CSNK1D-223ENST00000584472 COL11A2P13942 1736 aaPredicted RBP20.39■□□□□ 0.85
CSNK1D-223ENST00000584472 PPP1R42Q7Z4L9 355 aa20.38■□□□□ 0.85
CSNK1D-223ENST00000584472 FAM177BA6PVY3 158 aa20.37■□□□□ 0.85
CSNK1D-223ENST00000584472 BCAR3O75815 825 aa20.37■□□□□ 0.85
CSNK1D-223ENST00000584472 NTSR2O95665 410 aa20.37■□□□□ 0.85
CSNK1D-223ENST00000584472 BRPF1P55201 1214 aaPredicted RBP20.37■□□□□ 0.85
CSNK1D-223ENST00000584472 SUSD4Q5VX71 490 aa20.37■□□□□ 0.85
CSNK1D-223ENST00000584472 RIC3Q7Z5B4 369 aa20.37■□□□□ 0.85
CSNK1D-223ENST00000584472 NLRP10Q86W26 655 aa20.37■□□□□ 0.85
CSNK1D-223ENST00000584472 C2CD5Q86YS7 1000 aa20.37■□□□□ 0.85
CSNK1D-223ENST00000584472 KLRG2A4D1S0 409 aaPredicted RBP20.36■□□□□ 0.85
CSNK1D-223ENST00000584472 GTF2E1P29083 439 aaPredicted RBP20.36■□□□□ 0.85
CSNK1D-223ENST00000584472 TRIM28Q13263 835 aaKnown RBP20.36■□□□□ 0.85
CSNK1D-223ENST00000584472 G2E3Q7L622 706 aa20.36■□□□□ 0.85
CSNK1D-223ENST00000584472 CCDC24Q8N4L8 307 aa20.36■□□□□ 0.85
CSNK1D-223ENST00000584472 ISCA1Q9BUE6 129 aa20.36■□□□□ 0.85
CSNK1D-223ENST00000584472 CENPBP07199 599 aaPredicted RBP20.35■□□□□ 0.85
CSNK1D-223ENST00000584472 UTP14AQ9BVJ6 771 aaKnown RBP20.35■□□□□ 0.85
CSNK1D-223ENST00000584472 SBF1O95248 1867 aa20.35■□□□□ 0.85
CSNK1D-223ENST00000584472 ABCC12Q96J65 1359 aa20.34■□□□□ 0.85
CSNK1D-223ENST00000584472 FLIIQ13045 1269 aa20.34■□□□□ 0.85
CSNK1D-223ENST00000584472 C9orf131Q5VYM1 1079 aa20.34■□□□□ 0.85
CSNK1D-223ENST00000584472 KSR2Q6VAB6 950 aa20.34■□□□□ 0.85
CSNK1D-223ENST00000584472 TNRC6CQ9HCJ0 1690 aaKnown RBP20.34■□□□□ 0.85
CSNK1D-223ENST00000584472 CEP350Q5VT06 3117 aa20.34■□□□□ 0.85
CSNK1D-223ENST00000584472 KIF3CO14782 793 aa20.33■□□□□ 0.85
CSNK1D-223ENST00000584472 SRGNP10124 158 aa20.33■□□□□ 0.85
CSNK1D-223ENST00000584472 ERFEQ4G0M1 354 aa20.33■□□□□ 0.85
CSNK1D-223ENST00000584472 STYK1Q6J9G0 422 aa20.33■□□□□ 0.85
CSNK1D-223ENST00000584472 NUTM1Q86Y26 1132 aa20.33■□□□□ 0.85
CSNK1D-223ENST00000584472 KIF16BQ96L93 1317 aa20.32■□□□□ 0.84
CSNK1D-223ENST00000584472 PI4KAP2A4QPH2 592 aa20.32■□□□□ 0.84
CSNK1D-223ENST00000584472 PI4KAP1Q8N8J0 262 aa20.32■□□□□ 0.84
CSNK1D-223ENST00000584472 METTL22Q9BUU2 404 aaPredicted RBP20.32■□□□□ 0.84
CSNK1D-223ENST00000584472 MAP3K2Q9Y2U5 619 aa20.32■□□□□ 0.84
CSNK1D-223ENST00000584472 ATP5J2-PTCD1G3V325 749 aa20.31■□□□□ 0.84
CSNK1D-223ENST00000584472 LMNB1P20700 586 aa20.31■□□□□ 0.84
CSNK1D-223ENST00000584472 SLC10A5Q5PT55 438 aa20.31■□□□□ 0.84
CSNK1D-223ENST00000584472 CNKSR1Q969H4 720 aa20.31■□□□□ 0.84
CSNK1D-223ENST00000584472 MASTLQ96GX5 879 aa20.31■□□□□ 0.84
CSNK1D-223ENST00000584472 TRMT112Q9UI30 125 aaKnown RBP20.31■□□□□ 0.84
CSNK1D-223ENST00000584472 NOB1Q9ULX3 412 aaKnown RBP20.31■□□□□ 0.84
CSNK1D-223ENST00000584472 PTPRCP08575 1304 aa20.3■□□□□ 0.84
CSNK1D-223ENST00000584472 KDM2BQ8NHM5 1336 aa20.3■□□□□ 0.84
CSNK1D-223ENST00000584472 SH3TC1Q8TE82 1336 aa20.3■□□□□ 0.84
CSNK1D-223ENST00000584472 LTBP3Q9NS15 1303 aa20.3■□□□□ 0.84
CSNK1D-223ENST00000584472 NPR1P16066 1061 aa20.3■□□□□ 0.84
CSNK1D-223ENST00000584472 FKBP5Q13451 457 aaPredicted RBP20.3■□□□□ 0.84
CSNK1D-223ENST00000584472 CRY2Q49AN0 593 aa20.3■□□□□ 0.84
CSNK1D-223ENST00000584472 SOGA3Q5TF21 947 aa20.3■□□□□ 0.84
CSNK1D-223ENST00000584472 ZNF526Q8TF50 670 aaPredicted RBP20.3■□□□□ 0.84
CSNK1D-223ENST00000584472 RNF181Q9P0P0 153 aa20.3■□□□□ 0.84
CSNK1D-223ENST00000584472 TOMM70O94826 608 aa20.29■□□□□ 0.84
CSNK1D-223ENST00000584472 NEXNQ0ZGT2 675 aa20.29■□□□□ 0.84
CSNK1D-223ENST00000584472 CCDC191Q8NCU4 936 aa20.29■□□□□ 0.84
CSNK1D-223ENST00000584472 ZNF622Q969S3 477 aaKnown RBP eCLIP20.29■□□□□ 0.849e-8■□□□□ 10
CSNK1D-223ENST00000584472 MYD88Q99836 296 aa20.29■□□□□ 0.84
CSNK1D-223ENST00000584472 ARHGAP45Q92619 1136 aa20.28■□□□□ 0.84
CSNK1D-223ENST00000584472 FRAT1Q92837 279 aaPredicted RBP20.28■□□□□ 0.84
CSNK1D-223ENST00000584472 LAMB2P55268 1798 aa20.28■□□□□ 0.84
CSNK1D-223ENST00000584472 FER1L6Q2WGJ9 1857 aa20.27■□□□□ 0.84
CSNK1D-223ENST00000584472 IPO8O15397 1037 aaKnown RBP20.27■□□□□ 0.84
CSNK1D-223ENST00000584472 CWC25Q9NXE8 425 aaPredicted RBP20.27■□□□□ 0.84
CSNK1D-223ENST00000584472 DDX60Q8IY21 1712 aaKnown RBP20.27■□□□□ 0.83
CSNK1D-223ENST00000584472 NFKBIEO00221 500 aa20.26■□□□□ 0.83
CSNK1D-223ENST00000584472 ZKSCAN2Q63HK3 967 aa20.26■□□□□ 0.83
CSNK1D-223ENST00000584472 ZBTB38Q8NAP3 1195 aaPredicted RBP20.26■□□□□ 0.83
CSNK1D-223ENST00000584472 DNAAF4Q8WXU2 420 aa20.26■□□□□ 0.83
CSNK1D-223ENST00000584472 NLRP3Q96P20 1036 aa20.26■□□□□ 0.83
CSNK1D-223ENST00000584472 CACNA1SQ13698 1873 aa20.26■□□□□ 0.83
CSNK1D-223ENST00000584472 IGKV5-2P06315 115 aa20.25■□□□□ 0.83
CSNK1D-223ENST00000584472 HSP90B1P14625 803 aaKnown RBP20.25■□□□□ 0.83
CSNK1D-223ENST00000584472 HSPA6P17066 643 aa20.25■□□□□ 0.83
CSNK1D-223ENST00000584472 HOXA10P31260 410 aaPredicted RBP20.25■□□□□ 0.83
CSNK1D-223ENST00000584472 PRPF40BQ6NWY9 871 aaKnown RBP20.25■□□□□ 0.83
CSNK1D-223ENST00000584472 ATF7IPQ6VMQ6 1270 aa20.25■□□□□ 0.83
CSNK1D-223ENST00000584472 RPGRQ92834 1020 aaKnown RBP20.25■□□□□ 0.83
CSNK1D-223ENST00000584472 API5Q9BZZ5 524 aaKnown RBP20.25■□□□□ 0.83
CSNK1D-223ENST00000584472 SLX4Q8IY92 1834 aa20.25■□□□□ 0.83
CSNK1D-223ENST00000584472 PCCAP05165 728 aaPredicted RBP20.24■□□□□ 0.83
CSNK1D-223ENST00000584472 HCLS1P14317 486 aaPredicted RBP20.24■□□□□ 0.83
CSNK1D-223ENST00000584472 TRIM27P14373 513 aa20.24■□□□□ 0.83
CSNK1D-223ENST00000584472 ALDH1B1P30837 517 aa20.24■□□□□ 0.83
CSNK1D-223ENST00000584472 RRP1P56182 461 aaKnown RBP20.24■□□□□ 0.83
CSNK1D-223ENST00000584472 SYNE4Q8N205 404 aa20.24■□□□□ 0.83
CSNK1D-223ENST00000584472 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.24■□□□□ 0.83
CSNK1D-223ENST00000584472 FAM89AQ96GI7 184 aa20.24■□□□□ 0.83
CSNK1D-223ENST00000584472 SUPT16HQ9Y5B9 1047 aaKnown RBP20.24■□□□□ 0.83
CSNK1D-223ENST00000584472 NEURL1BA8MQ27 555 aa20.23■□□□□ 0.83
CSNK1D-223ENST00000584472 F6X3S4 739 aa20.23■□□□□ 0.83
CSNK1D-223ENST00000584472 PLIN1O60240 522 aa20.23■□□□□ 0.83
CSNK1D-223ENST00000584472 RASSF7Q02833 373 aa20.23■□□□□ 0.83
CSNK1D-223ENST00000584472 C3orf67Q6ZVT6 689 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms