RNA–Protein interactions for RNA: ENST00000584336.1

CDK12-208, Transcript of cyclin dependent kinase 12, humanhuman

Gene CDK12, Length 1,963 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-208ENST00000584336 TBC1D9Q6ZT07 1266 aa12.87□□□□□ -0.35
CDK12-208ENST00000584336 LINC00116Q8NCU8 138 aa12.87□□□□□ -0.35
CDK12-208ENST00000584336 IPO9Q96P70 1041 aaKnown RBP12.87□□□□□ -0.35
CDK12-208ENST00000584336 MAP3K15Q6ZN16 1313 aa12.87□□□□□ -0.35
CDK12-208ENST00000584336 LMBR1LQ6UX01 489 aa12.87□□□□□ -0.35
CDK12-208ENST00000584336 KIF6Q6ZMV9 814 aa12.87□□□□□ -0.35
CDK12-208ENST00000584336 OS9Q13438 667 aaPredicted RBP12.86□□□□□ -0.35
CDK12-208ENST00000584336 FAM89AQ96GI7 184 aa12.86□□□□□ -0.35
CDK12-208ENST00000584336 CCDC85AQ96PX6 553 aaPredicted RBP12.86□□□□□ -0.35
CDK12-208ENST00000584336 RAB11FIP3O75154 756 aa12.85□□□□□ -0.35
CDK12-208ENST00000584336 MX1P20591 662 aa12.85□□□□□ -0.35
CDK12-208ENST00000584336 EIF5P55010 431 aaKnown RBP12.85□□□□□ -0.35
CDK12-208ENST00000584336 GIGYF2Q6Y7W6 1299 aaKnown RBP12.85□□□□□ -0.35
CDK12-208ENST00000584336 DZIP3Q86Y13 1208 aaKnown RBP12.85□□□□□ -0.35
CDK12-208ENST00000584336 CCDC87Q9NVE4 849 aa12.85□□□□□ -0.35
CDK12-208ENST00000584336 MYH14Q7Z406 1995 aaKnown RBP12.85□□□□□ -0.35
CDK12-208ENST00000584336 PTPN12Q05209 780 aaKnown RBP12.85□□□□□ -0.35
CDK12-208ENST00000584336 RABL6Q3YEC7 729 aaPredicted RBP12.85□□□□□ -0.35
CDK12-208ENST00000584336 CCDC191Q8NCU4 936 aa12.85□□□□□ -0.35
CDK12-208ENST00000584336 KIF1BPQ96EK5 621 aa12.85□□□□□ -0.35
CDK12-208ENST00000584336 ZNF594Q96JF6 807 aaPredicted RBP12.85□□□□□ -0.35
CDK12-208ENST00000584336 OSBPL3Q9H4L5 887 aa12.85□□□□□ -0.35
CDK12-208ENST00000584336 CHMP3Q9Y3E7 222 aa12.85□□□□□ -0.35
CDK12-208ENST00000584336 IL6STP40189 918 aaPredicted RBP12.84□□□□□ -0.35
CDK12-208ENST00000584336 CCDC125Q86Z20 511 aa12.84□□□□□ -0.35
CDK12-208ENST00000584336 CCDC8Q9H0W5 538 aaPredicted RBP12.84□□□□□ -0.35
CDK12-208ENST00000584336 TLR7Q9NYK1 1049 aaKnown RBP12.84□□□□□ -0.35
CDK12-208ENST00000584336 UBN2Q6ZU65 1347 aa12.83□□□□□ -0.35
CDK12-208ENST00000584336 FAM177BA6PVY3 158 aa12.83□□□□□ -0.35
CDK12-208ENST00000584336 AMIGO3Q86WK7 504 aa12.83□□□□□ -0.35
CDK12-208ENST00000584336 TBC1D32Q96NH3 1257 aa12.83□□□□□ -0.35
CDK12-208ENST00000584336 NLRP10Q86W26 655 aa12.83□□□□□ -0.36
CDK12-208ENST00000584336 PI4K2BQ8TCG2 481 aa12.83□□□□□ -0.36
CDK12-208ENST00000584336 EAF2Q96CJ1 260 aaPredicted RBP12.83□□□□□ -0.36
CDK12-208ENST00000584336 STAP2Q9UGK3 403 aa12.83□□□□□ -0.36
CDK12-208ENST00000584336 CDC45O75419 566 aa12.82□□□□□ -0.36
CDK12-208ENST00000584336 G3BP1Q13283 466 aaKnown RBP eCLIP12.82□□□□□ -0.362e-6■■■■□ 20.3
CDK12-208ENST00000584336 SMARCC1Q92922 1105 aaPredicted RBP12.82□□□□□ -0.36
CDK12-208ENST00000584336 RILPL2Q969X0 211 aa12.82□□□□□ -0.36
CDK12-208ENST00000584336 CAMTA2O94983 1202 aa12.81□□□□□ -0.36
CDK12-208ENST00000584336 LRRC24Q50LG9 513 aa12.81□□□□□ -0.36
CDK12-208ENST00000584336 FAM196AQ6ZSG2 479 aa12.81□□□□□ -0.36
CDK12-208ENST00000584336 PUS3Q9BZE2 481 aaKnown RBP12.81□□□□□ -0.36
CDK12-208ENST00000584336 C22orf23Q9BZE7 217 aa12.81□□□□□ -0.36
CDK12-208ENST00000584336 HDAC5Q9UQL6 1122 aa12.81□□□□□ -0.36
CDK12-208ENST00000584336 BTAF1O14981 1849 aa12.81□□□□□ -0.36
CDK12-208ENST00000584336 TUBGCP6Q96RT7 1819 aa12.81□□□□□ -0.36
CDK12-208ENST00000584336 TFCP2Q12800 502 aa12.81□□□□□ -0.36
CDK12-208ENST00000584336 SUSD4Q5VX71 490 aa12.81□□□□□ -0.36
CDK12-208ENST00000584336 AACSQ86V21 672 aa12.81□□□□□ -0.36
CDK12-208ENST00000584336 COL15A1P39059 1388 aa12.8□□□□□ -0.36
CDK12-208ENST00000584336 NUP98P52948 1817 aa12.8□□□□□ -0.36
CDK12-208ENST00000584336 TRIM6-TRIM34B2RNG4 842 aa12.8□□□□□ -0.36
CDK12-208ENST00000584336 PCCAP05165 728 aaPredicted RBP12.8□□□□□ -0.36
CDK12-208ENST00000584336 TRIM28Q13263 835 aaKnown RBP12.8□□□□□ -0.36
CDK12-208ENST00000584336 HSP90AB4PQ58FF6 505 aa12.8□□□□□ -0.36
CDK12-208ENST00000584336 ZNF34Q8IZ26 560 aa12.8□□□□□ -0.36
CDK12-208ENST00000584336 COPRSQ9NQ92 184 aa12.8□□□□□ -0.36
CDK12-208ENST00000584336 RREB1Q92766 1687 aa12.8□□□□□ -0.36
CDK12-208ENST00000584336 COL5A3P25940 1745 aaPredicted RBP12.8□□□□□ -0.36
CDK12-208ENST00000584336 ZBTB38Q8NAP3 1195 aaPredicted RBP12.8□□□□□ -0.36
CDK12-208ENST00000584336 IL25Q9H293 177 aa12.8□□□□□ -0.36
CDK12-208ENST00000584336 NHSQ6T4R5 1651 aa12.79□□□□□ -0.36
CDK12-208ENST00000584336 ERVV-1B6SEH8 477 aa12.79□□□□□ -0.36
CDK12-208ENST00000584336 ATG9AQ7Z3C6 839 aa12.79□□□□□ -0.36
CDK12-208ENST00000584336 CLASRPQ8N2M8 674 aaKnown RBP12.79□□□□□ -0.36
CDK12-208ENST00000584336 SRP68Q9UHB9 627 aaKnown RBP12.78□□□□□ -0.36
CDK12-208ENST00000584336 TRMT112Q9UI30 125 aaKnown RBP12.78□□□□□ -0.36
CDK12-208ENST00000584336 SBF2Q86WG5 1849 aa12.78□□□□□ -0.36
CDK12-208ENST00000584336 IFIT2P09913 472 aaKnown RBP12.78□□□□□ -0.36
CDK12-208ENST00000584336 LRRC4BQ9NT99 713 aa12.78□□□□□ -0.36
CDK12-208ENST00000584336 CCNL1Q9UK58 526 aaPredicted RBP12.78□□□□□ -0.36
CDK12-208ENST00000584336 NDUFB9Q9Y6M9 179 aa12.78□□□□□ -0.36
CDK12-208ENST00000584336 ANKRD36CQ5JPF3 1778 aa12.77□□□□□ -0.37
CDK12-208ENST00000584336 CICQ96RK0 1608 aaPredicted RBP12.77□□□□□ -0.37
CDK12-208ENST00000584336 IRS4O14654 1257 aaPredicted RBP12.77□□□□□ -0.37
CDK12-208ENST00000584336 HCLS1P14317 486 aaPredicted RBP12.77□□□□□ -0.37
CDK12-208ENST00000584336 ERC1Q8IUD2 1116 aa12.77□□□□□ -0.37
CDK12-208ENST00000584336 GREM2Q9H772 168 aa12.77□□□□□ -0.37
CDK12-208ENST00000584336 UPF2Q9HAU5 1272 aaKnown RBP12.77□□□□□ -0.37
CDK12-208ENST00000584336 BCL2L12Q9HB09 334 aa12.77□□□□□ -0.37
CDK12-208ENST00000584336 CSF1RP07333 972 aa12.76□□□□□ -0.37
CDK12-208ENST00000584336 TNNI3KQ59H18 835 aa12.76□□□□□ -0.37
CDK12-208ENST00000584336 EDC3Q96F86 508 aaKnown RBP12.76□□□□□ -0.37
CDK12-208ENST00000584336 KIF2CQ99661 725 aa12.76□□□□□ -0.37
CDK12-208ENST00000584336 FPGT-TNNI3KV9GXZ4 949 aa12.76□□□□□ -0.37
CDK12-208ENST00000584336 USP42Q9H9J4 1324 aaKnown RBP12.76□□□□□ -0.37
CDK12-208ENST00000584336 TRIM37O94972 964 aa12.76□□□□□ -0.37
CDK12-208ENST00000584336 CHMLP26374 656 aa12.76□□□□□ -0.37
CDK12-208ENST00000584336 TIMM10P62072 90 aa12.76□□□□□ -0.37
CDK12-208ENST00000584336 SF3B2Q13435 895 aaKnown RBP12.76□□□□□ -0.37
CDK12-208ENST00000584336 HSP90AB3PQ58FF7 597 aa12.76□□□□□ -0.37
CDK12-208ENST00000584336 BICDL1Q6ZP65 573 aa12.76□□□□□ -0.37
CDK12-208ENST00000584336 TTLL11Q8NHH1 800 aa12.76□□□□□ -0.37
CDK12-208ENST00000584336 DBNDD2Q9BQY9 259 aa12.76□□□□□ -0.37
CDK12-208ENST00000584336 BOLA2Q9H3K6 86 aa12.76□□□□□ -0.37
CDK12-208ENST00000584336 DBNLQ9UJU6 430 aaKnown RBP12.76□□□□□ -0.37
CDK12-208ENST00000584336 NIP7Q9Y221 180 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDK12-208ENST00000584336 AOX1Q06278 1338 aa12.75□□□□□ -0.37
CDK12-208ENST00000584336 USPL1Q5W0Q7 1092 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms