RNA–Protein interactions for RNA: ENST00000584335.5

SNX11-213, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-213ENST00000584335 IGKV5-2P06315 115 aa11.72□□□□□ -0.53
SNX11-213ENST00000584335 MKRN3Q13064 507 aaKnown RBP11.72□□□□□ -0.53
SNX11-213ENST00000584335 MTX1Q13505 466 aa11.72□□□□□ -0.53
SNX11-213ENST00000584335 FAM161AQ3B820 660 aa11.72□□□□□ -0.53
SNX11-213ENST00000584335 SSH3Q8TE77 659 aa11.72□□□□□ -0.53
SNX11-213ENST00000584335 BCL11BQ9C0K0 894 aaPredicted RBP11.72□□□□□ -0.53
SNX11-213ENST00000584335 LRRFIP2Q9Y608 721 aaKnown RBP11.72□□□□□ -0.53
SNX11-213ENST00000584335 STK24Q9Y6E0 443 aa11.72□□□□□ -0.53
SNX11-213ENST00000584335 NHSQ6T4R5 1651 aa11.71□□□□□ -0.53
SNX11-213ENST00000584335 NEURL1BA8MQ27 555 aa11.71□□□□□ -0.53
SNX11-213ENST00000584335 GRM8O00222 908 aa11.71□□□□□ -0.53
SNX11-213ENST00000584335 SEC24BO95487 1268 aa11.71□□□□□ -0.53
SNX11-213ENST00000584335 A1BGP04217 495 aa11.71□□□□□ -0.53
SNX11-213ENST00000584335 NBPF7P0C2Y1 421 aaPredicted RBP11.71□□□□□ -0.53
SNX11-213ENST00000584335 DNAJC10Q8IXB1 793 aa11.71□□□□□ -0.53
SNX11-213ENST00000584335 SMARCC1Q92922 1105 aaPredicted RBP11.71□□□□□ -0.53
SNX11-213ENST00000584335 GJD4Q96KN9 370 aaPredicted RBP11.71□□□□□ -0.53
SNX11-213ENST00000584335 SLC4A9Q96Q91 983 aa11.71□□□□□ -0.53
SNX11-213ENST00000584335 AFDNP55196 1824 aaKnown RBP11.71□□□□□ -0.54
SNX11-213ENST00000584335 CYP19A1P11511 503 aaPredicted RBP11.7□□□□□ -0.54
SNX11-213ENST00000584335 CWF19L2Q2TBE0 894 aaKnown RBP11.7□□□□□ -0.54
SNX11-213ENST00000584335 C8orf34Q49A92 452 aa11.7□□□□□ -0.54
SNX11-213ENST00000584335 IER5LQ5T953 404 aa11.7□□□□□ -0.54
SNX11-213ENST00000584335 ANKRD45Q5TZF3 282 aa11.7□□□□□ -0.54
SNX11-213ENST00000584335 SYTL4Q96C24 671 aaPredicted RBP11.7□□□□□ -0.54
SNX11-213ENST00000584335 C9orf78Q9NZ63 289 aaPredicted RBP11.7□□□□□ -0.54
SNX11-213ENST00000584335 TRPC5Q9UL62 973 aaPredicted RBP11.7□□□□□ -0.54
SNX11-213ENST00000584335 COL5A3P25940 1745 aaPredicted RBP11.69□□□□□ -0.54
SNX11-213ENST00000584335 PIP4K2AP48426 406 aaPredicted RBP11.69□□□□□ -0.54
SNX11-213ENST00000584335 GCKRQ14397 625 aa11.69□□□□□ -0.54
SNX11-213ENST00000584335 MYD88Q99836 296 aa11.69□□□□□ -0.54
SNX11-213ENST00000584335 LNPKQ9C0E8 428 aa11.69□□□□□ -0.54
SNX11-213ENST00000584335 PNMA6EA0A0J9YXQ4 647 aa11.68□□□□□ -0.54
SNX11-213ENST00000584335 TTLL7Q6ZT98 887 aa11.68□□□□□ -0.54
SNX11-213ENST00000584335 ACSBG1Q96GR2 724 aa11.68□□□□□ -0.54
SNX11-213ENST00000584335 COLQQ9Y215 455 aaPredicted RBP11.68□□□□□ -0.54
SNX11-213ENST00000584335 PALLDQ8WX93 1383 aa11.67□□□□□ -0.54
SNX11-213ENST00000584335 RAB11FIP3O75154 756 aa11.67□□□□□ -0.54
SNX11-213ENST00000584335 IL6STP40189 918 aaPredicted RBP11.67□□□□□ -0.54
SNX11-213ENST00000584335 TRIM28Q13263 835 aaKnown RBP11.67□□□□□ -0.54
SNX11-213ENST00000584335 PPP1R42Q7Z4L9 355 aa11.67□□□□□ -0.54
SNX11-213ENST00000584335 EFCAB3Q8N7B9 438 aa11.67□□□□□ -0.54
SNX11-213ENST00000584335 ANKRD36CQ5JPF3 1778 aa11.67□□□□□ -0.54
SNX11-213ENST00000584335 BTAF1O14981 1849 aa11.66□□□□□ -0.54
SNX11-213ENST00000584335 SBF2Q86WG5 1849 aa11.66□□□□□ -0.54
SNX11-213ENST00000584335 LOC102724428A0A0B4J2F2 783 aa11.66□□□□□ -0.54
SNX11-213ENST00000584335 SIK1P57059 783 aa11.66□□□□□ -0.54
SNX11-213ENST00000584335 HSP90AB4PQ58FF6 505 aa11.66□□□□□ -0.54
SNX11-213ENST00000584335 BMP2KLQ5H9B9 411 aa11.66□□□□□ -0.54
SNX11-213ENST00000584335 KIF6Q6ZMV9 814 aa11.66□□□□□ -0.54
SNX11-213ENST00000584335 CCDC191Q8NCU4 936 aa11.66□□□□□ -0.54
SNX11-213ENST00000584335 KAZALD1Q96I82 304 aa11.66□□□□□ -0.54
SNX11-213ENST00000584335 NOP58Q9Y2X3 529 aaKnown RBP11.66□□□□□ -0.54
SNX11-213ENST00000584335 MAP3K15Q6ZN16 1313 aa11.65□□□□□ -0.54
SNX11-213ENST00000584335 POTEFA5A3E0 1075 aa11.65□□□□□ -0.54
SNX11-213ENST00000584335 ERVV-1B6SEH8 477 aa11.65□□□□□ -0.54
SNX11-213ENST00000584335 H7C1W4 665 aa11.65□□□□□ -0.54
SNX11-213ENST00000584335 SRGAP3O43295 1099 aa11.65□□□□□ -0.54
SNX11-213ENST00000584335 KCNQ2O43526 872 aa11.65□□□□□ -0.54
SNX11-213ENST00000584335 PLCG2P16885 1265 aa11.65□□□□□ -0.54
SNX11-213ENST00000584335 CASP7P55210 303 aa11.65□□□□□ -0.54
SNX11-213ENST00000584335 TCIRG1Q13488 830 aa11.65□□□□□ -0.54
SNX11-213ENST00000584335 PLEKHM2Q8IWE5 1019 aa11.65□□□□□ -0.54
SNX11-213ENST00000584335 SUCLG2Q96I99 432 aa11.65□□□□□ -0.54
SNX11-213ENST00000584335 ISCA1Q9BUE6 129 aa11.65□□□□□ -0.54
SNX11-213ENST00000584335 LRRCC1Q9C099 1032 aa11.65□□□□□ -0.54
SNX11-213ENST00000584335 CCDC87Q9NVE4 849 aa11.65□□□□□ -0.54
SNX11-213ENST00000584335 CWC25Q9NXE8 425 aaPredicted RBP11.65□□□□□ -0.54
SNX11-213ENST00000584335 SALL3Q9BXA9 1300 aa11.64□□□□□ -0.55
SNX11-213ENST00000584335 ATP6V1AP38606 617 aa11.64□□□□□ -0.55
SNX11-213ENST00000584335 EIF5P55010 431 aaKnown RBP11.64□□□□□ -0.55
SNX11-213ENST00000584335 RABL6Q3YEC7 729 aaPredicted RBP11.64□□□□□ -0.55
SNX11-213ENST00000584335 HSP90AB3PQ58FF7 597 aa11.64□□□□□ -0.55
SNX11-213ENST00000584335 GIGYF2Q6Y7W6 1299 aaKnown RBP11.64□□□□□ -0.55
SNX11-213ENST00000584335 OSBPL3Q9H4L5 887 aa11.64□□□□□ -0.55
SNX11-213ENST00000584335 BICC1Q9H694 974 aaKnown RBP11.64□□□□□ -0.55
SNX11-213ENST00000584335 QTRT2Q9H974 415 aaKnown RBP11.64□□□□□ -0.55
SNX11-213ENST00000584335 EXOC6BQ9Y2D4 811 aa11.64□□□□□ -0.55
SNX11-213ENST00000584335 ZBTB1Q9Y2K1 713 aa11.64□□□□□ -0.55
SNX11-213ENST00000584335 LY75O60449 1722 aa11.63□□□□□ -0.55
SNX11-213ENST00000584335 A0A087WZG4 1122 aa11.63□□□□□ -0.55
SNX11-213ENST00000584335 A0A0G2JS52 829 aa11.63□□□□□ -0.55
SNX11-213ENST00000584335 IRX5P78411 483 aaPredicted RBP11.63□□□□□ -0.55
SNX11-213ENST00000584335 MYT1Q01538 1121 aa11.63□□□□□ -0.55
SNX11-213ENST00000584335 LHX8Q68G74 356 aa11.63□□□□□ -0.55
SNX11-213ENST00000584335 INTS5Q6P9B9 1019 aaKnown RBP11.63□□□□□ -0.55
SNX11-213ENST00000584335 SEPT12Q8IYM1 358 aa11.63□□□□□ -0.55
SNX11-213ENST00000584335 ZBTB3Q9H5J0 574 aa11.63□□□□□ -0.55
SNX11-213ENST00000584335 ATP5J2-PTCD1G3V325 749 aa11.62□□□□□ -0.55
SNX11-213ENST00000584335 CRKLP46109 303 aaKnown RBP11.62□□□□□ -0.55
SNX11-213ENST00000584335 ITPK1Q13572 414 aa11.62□□□□□ -0.55
SNX11-213ENST00000584335 ERC1Q8IUD2 1116 aa11.62□□□□□ -0.55
SNX11-213ENST00000584335 KIF1BPQ96EK5 621 aa11.62□□□□□ -0.55
SNX11-213ENST00000584335 OCEL1Q9H607 264 aa11.62□□□□□ -0.55
SNX11-213ENST00000584335 NUP98P52948 1817 aa11.62□□□□□ -0.55
SNX11-213ENST00000584335 BCORQ6W2J9 1755 aa11.62□□□□□ -0.55
SNX11-213ENST00000584335 AOX1Q06278 1338 aa11.61□□□□□ -0.55
SNX11-213ENST00000584335 SMARCA5O60264 1052 aaPredicted RBP11.61□□□□□ -0.55
SNX11-213ENST00000584335 SURF6O75683 361 aaKnown RBP11.61□□□□□ -0.55
SNX11-213ENST00000584335 TTC22Q5TAA0 569 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms