RNA–Protein interactions for RNA: ENST00000583938.5

CNDP2-225, Transcript of carnosine dipeptidase 2, human

TSL 2

Gene CNDP2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNDP2-225	ENST00000583938	KIF6	Q6ZMV9	814 aa		11.67	□□□□□ -0.54
CNDP2-225	ENST00000583938	PLEKHM2	Q8IWE5	1019 aa		11.67	□□□□□ -0.54
CNDP2-225	ENST00000583938	KAZALD1	Q96I82	304 aa		11.67	□□□□□ -0.54
CNDP2-225	ENST00000583938	BICC1	Q9H694	974 aa	Known RBP	11.67	□□□□□ -0.54
CNDP2-225	ENST00000583938	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.67	□□□□□ -0.54
CNDP2-225	ENST00000583938	AFDN	P55196	1824 aa	Known RBP	11.67	□□□□□ -0.54
CNDP2-225	ENST00000583938	COL15A1	P39059	1388 aa		11.67	□□□□□ -0.54
CNDP2-225	ENST00000583938	PNPLA7	Q6ZV29	1317 aa		11.66	□□□□□ -0.54
CNDP2-225	ENST00000583938		A0A087WZG4	1122 aa		11.66	□□□□□ -0.54
CNDP2-225	ENST00000583938	GNPAT	O15228	680 aa		11.66	□□□□□ -0.54
CNDP2-225	ENST00000583938	SURF6	O75683	361 aa	Known RBP	11.66	□□□□□ -0.54
CNDP2-225	ENST00000583938	PHF14	O94880	888 aa		11.66	□□□□□ -0.54
CNDP2-225	ENST00000583938	HSP90AB4P	Q58FF6	505 aa		11.66	□□□□□ -0.54
CNDP2-225	ENST00000583938	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.66	□□□□□ -0.54
CNDP2-225	ENST00000583938	CWC25	Q9NXE8	425 aa	Predicted RBP	11.66	□□□□□ -0.54
CNDP2-225	ENST00000583938	STK32B	Q9NY57	414 aa		11.66	□□□□□ -0.54
CNDP2-225	ENST00000583938	ZBTB1	Q9Y2K1	713 aa		11.66	□□□□□ -0.54
CNDP2-225	ENST00000583938	SRCAP	Q6ZRS2	3230 aa		11.66	□□□□□ -0.54
CNDP2-225	ENST00000583938	IL6ST	P40189	918 aa	Predicted RBP	11.65	□□□□□ -0.54
CNDP2-225	ENST00000583938	UBE3B	Q7Z3V4	1068 aa		11.65	□□□□□ -0.54
CNDP2-225	ENST00000583938	CCDC191	Q8NCU4	936 aa		11.65	□□□□□ -0.54
CNDP2-225	ENST00000583938	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.65	□□□□□ -0.54
CNDP2-225	ENST00000583938	AK7	Q96M32	723 aa		11.65	□□□□□ -0.54
CNDP2-225	ENST00000583938	BCL11A	Q9H165	835 aa		11.65	□□□□□ -0.54
CNDP2-225	ENST00000583938	TFCP2L1	Q9NZI6	479 aa		11.65	□□□□□ -0.54
CNDP2-225	ENST00000583938	NOP58	Q9Y2X3	529 aa	Known RBP	11.65	□□□□□ -0.54
CNDP2-225	ENST00000583938	MAP3K15	Q6ZN16	1313 aa		11.64	□□□□□ -0.55
CNDP2-225	ENST00000583938	CNTNAP4	Q9C0A0	1308 aa		11.64	□□□□□ -0.55
CNDP2-225	ENST00000583938		H7C1W4	665 aa		11.64	□□□□□ -0.55
CNDP2-225	ENST00000583938	CASP7	P55210	303 aa		11.64	□□□□□ -0.55
CNDP2-225	ENST00000583938	TCIRG1	Q13488	830 aa		11.64	□□□□□ -0.55
CNDP2-225	ENST00000583938	TTC22	Q5TAA0	569 aa		11.64	□□□□□ -0.55
CNDP2-225	ENST00000583938	NPM2	Q86SE8	214 aa	Known RBP	11.64	□□□□□ -0.55
CNDP2-225	ENST00000583938	COL23A1	Q86Y22	540 aa	Predicted RBP	11.64	□□□□□ -0.55
CNDP2-225	ENST00000583938	ISCA1	Q9BUE6	129 aa		11.64	□□□□□ -0.55
CNDP2-225	ENST00000583938	CCDC87	Q9NVE4	849 aa		11.64	□□□□□ -0.55
CNDP2-225	ENST00000583938	SEC24B	O95487	1268 aa		11.63	□□□□□ -0.55
CNDP2-225	ENST00000583938	TRIM28	Q13263	835 aa	Known RBP	11.63	□□□□□ -0.55
CNDP2-225	ENST00000583938	RABL6	Q3YEC7	729 aa	Predicted RBP	11.63	□□□□□ -0.55
CNDP2-225	ENST00000583938	HSP90AB3P	Q58FF7	597 aa		11.63	□□□□□ -0.55
CNDP2-225	ENST00000583938	EPHA10	Q5JZY3	1008 aa		11.63	□□□□□ -0.55
CNDP2-225	ENST00000583938	RHPN1	Q8TCX5	695 aa		11.63	□□□□□ -0.55
CNDP2-225	ENST00000583938	JARID2	Q92833	1246 aa	Predicted RBP	11.63	□□□□□ -0.55
CNDP2-225	ENST00000583938	KIF1BP	Q96EK5	621 aa		11.63	□□□□□ -0.55
CNDP2-225	ENST00000583938	ARX	Q96QS3	562 aa		11.63	□□□□□ -0.55
CNDP2-225	ENST00000583938	OSBPL3	Q9H4L5	887 aa		11.63	□□□□□ -0.55
CNDP2-225	ENST00000583938	NUP98	P52948	1817 aa		11.63	□□□□□ -0.55
CNDP2-225	ENST00000583938	SALL3	Q9BXA9	1300 aa		11.62	□□□□□ -0.55
CNDP2-225	ENST00000583938	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.62	□□□□□ -0.55
CNDP2-225	ENST00000583938	ERVV-1	B6SEH8	477 aa		11.62	□□□□□ -0.55
CNDP2-225	ENST00000583938	GSPT1	P15170	499 aa	Known RBP	11.62	□□□□□ -0.55
CNDP2-225	ENST00000583938	PDE1A	P54750	535 aa		11.62	□□□□□ -0.55
CNDP2-225	ENST00000583938	OS9	Q13438	667 aa	Predicted RBP	11.62	□□□□□ -0.55
CNDP2-225	ENST00000583938	RC3H1	Q5TC82	1133 aa	Known RBP	11.62	□□□□□ -0.55
CNDP2-225	ENST00000583938	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.62	□□□□□ -0.55
CNDP2-225	ENST00000583938	DZIP3	Q86Y13	1208 aa	Known RBP	11.62	□□□□□ -0.55
CNDP2-225	ENST00000583938	ERC1	Q8IUD2	1116 aa		11.62	□□□□□ -0.55
CNDP2-225	ENST00000583938	UPF2	Q9HAU5	1272 aa	Known RBP	11.62	□□□□□ -0.55
CNDP2-225	ENST00000583938	BCOR	Q6W2J9	1755 aa		11.62	□□□□□ -0.55
CNDP2-225	ENST00000583938	COL24A1	Q17RW2	1714 aa		11.61	□□□□□ -0.55
CNDP2-225	ENST00000583938	MSH5	O43196	834 aa		11.61	□□□□□ -0.55
CNDP2-225	ENST00000583938	RPS6KA4	O75676	772 aa		11.61	□□□□□ -0.55
CNDP2-225	ENST00000583938	ZBTB7A	O95365	584 aa		11.61	□□□□□ -0.55
CNDP2-225	ENST00000583938	MX1	P20591	662 aa		11.61	□□□□□ -0.55
CNDP2-225	ENST00000583938	EIF5	P55010	431 aa	Known RBP	11.61	□□□□□ -0.55
CNDP2-225	ENST00000583938	MSL1	Q68DK7	614 aa		11.61	□□□□□ -0.55
CNDP2-225	ENST00000583938	ARHGEF1	Q92888	912 aa	Known RBP	11.61	□□□□□ -0.55
CNDP2-225	ENST00000583938	IL1RAPL2	Q9NP60	686 aa		11.61	□□□□□ -0.55
CNDP2-225	ENST00000583938	STAP2	Q9UGK3	403 aa		11.61	□□□□□ -0.55
CNDP2-225	ENST00000583938	SRP68	Q9UHB9	627 aa	Known RBP	11.61	□□□□□ -0.55
CNDP2-225	ENST00000583938	PA2G4	Q9UQ80	394 aa	Known RBP	11.61	□□□□□ -0.55
CNDP2-225	ENST00000583938	RTCB	Q9Y3I0	505 aa	Known RBP	11.61	□□□□□ -0.55
CNDP2-225	ENST00000583938	AOX1	Q06278	1338 aa		11.6	□□□□□ -0.55
CNDP2-225	ENST00000583938	SCN7A	Q01118	1682 aa		11.6	□□□□□ -0.55
CNDP2-225	ENST00000583938	CDC45	O75419	566 aa		11.6	□□□□□ -0.55
CNDP2-225	ENST00000583938	FOXO4	P98177	505 aa		11.6	□□□□□ -0.55
CNDP2-225	ENST00000583938	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.6	□□□□□ -0.55	8e-7	■■□□□ 13.3
CNDP2-225	ENST00000583938	HLF	Q16534	295 aa		11.6	□□□□□ -0.55
CNDP2-225	ENST00000583938	ANKRD36C	Q5JPF3	1778 aa		11.59	□□□□□ -0.55
CNDP2-225	ENST00000583938	PCCA	P05165	728 aa	Predicted RBP	11.59	□□□□□ -0.55
CNDP2-225	ENST00000583938	SDS	P20132	328 aa		11.59	□□□□□ -0.55
CNDP2-225	ENST00000583938	SSFA2	P28290	1259 aa		11.59	□□□□□ -0.55
CNDP2-225	ENST00000583938	RTL5	Q5HYW3	569 aa	Predicted RBP	11.59	□□□□□ -0.55
CNDP2-225	ENST00000583938	LMBR1L	Q6UX01	489 aa		11.59	□□□□□ -0.55
CNDP2-225	ENST00000583938	CLASRP	Q8N2M8	674 aa	Known RBP	11.59	□□□□□ -0.55
CNDP2-225	ENST00000583938	COPRS	Q9NQ92	184 aa		11.59	□□□□□ -0.55
CNDP2-225	ENST00000583938	TBC1D2B	Q9UPU7	963 aa		11.59	□□□□□ -0.55
CNDP2-225	ENST00000583938	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.59	□□□□□ -0.55
CNDP2-225	ENST00000583938	GPT	P24298	496 aa		11.58	□□□□□ -0.56
CNDP2-225	ENST00000583938	RFX5	P48382	616 aa	Predicted RBP	11.58	□□□□□ -0.56
CNDP2-225	ENST00000583938	TRAPPC3L	Q5T215	181 aa		11.58	□□□□□ -0.56
CNDP2-225	ENST00000583938	TBC1D9	Q6ZT07	1266 aa		11.58	□□□□□ -0.56
CNDP2-225	ENST00000583938	NLRP10	Q86W26	655 aa		11.58	□□□□□ -0.56
CNDP2-225	ENST00000583938	NUTM1	Q86Y26	1132 aa		11.58	□□□□□ -0.56
CNDP2-225	ENST00000583938	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.58	□□□□□ -0.56
CNDP2-225	ENST00000583938	IPO9	Q96P70	1041 aa	Known RBP	11.58	□□□□□ -0.56
CNDP2-225	ENST00000583938	EIF5B	O60841	1220 aa	Known RBP	11.57	□□□□□ -0.56
CNDP2-225	ENST00000583938	SASH1	O94885	1247 aa		11.57	□□□□□ -0.56
CNDP2-225	ENST00000583938	MFAP1	P55081	439 aa	Known RBP	11.57	□□□□□ -0.56
CNDP2-225	ENST00000583938	PTPN12	Q05209	780 aa	Known RBP	11.57	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms