RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 SPAG9O60271 1321 aaKnown RBP8.54□□□□□ -1.04
PRKCA-205ENST00000583775 KIDINS220Q9ULH0 1771 aa8.53□□□□□ -1.04
PRKCA-205ENST00000583775 MEN1O00255 615 aa8.53□□□□□ -1.04
PRKCA-205ENST00000583775 CLN3Q13286 438 aa8.53□□□□□ -1.04
PRKCA-205ENST00000583775 UBAP2LQ14157 1087 aaKnown RBP8.53□□□□□ -1.04
PRKCA-205ENST00000583775 GAS2L1Q99501 681 aaPredicted RBP8.53□□□□□ -1.04
PRKCA-205ENST00000583775 CFHR5Q9BXR6 569 aa8.53□□□□□ -1.04
PRKCA-205ENST00000583775 ALG2Q9H553 416 aa8.53□□□□□ -1.04
PRKCA-205ENST00000583775 PRDM15P57071 1507 aaPredicted RBP8.53□□□□□ -1.04
PRKCA-205ENST00000583775 E9PCH4 1651 aa8.53□□□□□ -1.04
PRKCA-205ENST00000583775 ADGRL1O94910 1474 aa8.52□□□□□ -1.05
PRKCA-205ENST00000583775 ZNF518AQ6AHZ1 1483 aa8.52□□□□□ -1.05
PRKCA-205ENST00000583775 NEO1Q92859 1461 aa8.52□□□□□ -1.05
PRKCA-205ENST00000583775 TRPM1Q7Z4N2 1603 aa8.52□□□□□ -1.05
PRKCA-205ENST00000583775 RNF17Q9BXT8 1623 aaKnown RBP8.52□□□□□ -1.05
PRKCA-205ENST00000583775 PIK3CDO00329 1044 aa8.52□□□□□ -1.05
PRKCA-205ENST00000583775 F11P03951 625 aa8.52□□□□□ -1.05
PRKCA-205ENST00000583775 MAP2K3P46734 347 aa8.52□□□□□ -1.05
PRKCA-205ENST00000583775 TSGA10IPQ3SY00 556 aa8.52□□□□□ -1.05
PRKCA-205ENST00000583775 CCDC125Q86Z20 511 aa8.52□□□□□ -1.05
PRKCA-205ENST00000583775 CCDC82Q8N4S0 544 aa8.52□□□□□ -1.05
PRKCA-205ENST00000583775 NSFL1CQ9UNZ2 370 aaKnown RBP8.52□□□□□ -1.05
PRKCA-205ENST00000583775 CCDC144AA2RUR9 1427 aa8.52□□□□□ -1.05
PRKCA-205ENST00000583775 PTPRTO14522 1441 aa8.52□□□□□ -1.05
PRKCA-205ENST00000583775 GLI2P10070 1586 aa8.52□□□□□ -1.05
PRKCA-205ENST00000583775 WASHC2AQ641Q2 1341 aa8.52□□□□□ -1.05
PRKCA-205ENST00000583775 CEP152O94986 1710 aa8.51□□□□□ -1.05
PRKCA-205ENST00000583775 SPHKAPQ2M3C7 1700 aa8.51□□□□□ -1.05
PRKCA-205ENST00000583775 MLH3Q9UHC1 1453 aa8.51□□□□□ -1.05
PRKCA-205ENST00000583775 DHX29Q7Z478 1369 aaKnown RBP8.51□□□□□ -1.05
PRKCA-205ENST00000583775 CCDC7Q96M83 1385 aa8.51□□□□□ -1.05
PRKCA-205ENST00000583775 TRPM2O94759 1503 aa8.51□□□□□ -1.05
PRKCA-205ENST00000583775 LMTK2Q8IWU2 1503 aa8.51□□□□□ -1.05
PRKCA-205ENST00000583775 RFX1P22670 979 aa8.51□□□□□ -1.05
PRKCA-205ENST00000583775 LINC00114Q6XXX2 140 aa8.51□□□□□ -1.05
PRKCA-205ENST00000583775 KLRG1Q96E93 195 aa8.51□□□□□ -1.05
PRKCA-205ENST00000583775 NUCKS1Q9H1E3 243 aaKnown RBP8.51□□□□□ -1.05
PRKCA-205ENST00000583775 SCAPERQ9BY12 1400 aa8.51□□□□□ -1.05
PRKCA-205ENST00000583775 CNTLNQ9NXG0 1405 aa8.51□□□□□ -1.05
PRKCA-205ENST00000583775 MROH1Q8NDA8 1641 aa8.51□□□□□ -1.05
PRKCA-205ENST00000583775 GPRASP1Q5JY77 1395 aa8.5□□□□□ -1.05
PRKCA-205ENST00000583775 KRTAP9-6A0A140TA67 174 aa8.5□□□□□ -1.05
PRKCA-205ENST00000583775 ANP32CO43423 234 aa8.5□□□□□ -1.05
PRKCA-205ENST00000583775 FURINP09958 794 aa8.5□□□□□ -1.05
PRKCA-205ENST00000583775 CC2D2BQ6DHV5 1058 aa8.5□□□□□ -1.05
PRKCA-205ENST00000583775 CEP126Q9P2H0 1117 aa8.5□□□□□ -1.05
PRKCA-205ENST00000583775 MKL2Q9ULH7 1088 aa8.5□□□□□ -1.05
PRKCA-205ENST00000583775 MAP3K4Q9Y6R4 1608 aa8.5□□□□□ -1.05
PRKCA-205ENST00000583775 CD109Q6YHK3 1445 aa8.49□□□□□ -1.05
PRKCA-205ENST00000583775 PRAG1Q86YV5 1406 aa8.49□□□□□ -1.05
PRKCA-205ENST00000583775 ITGB7P26010 798 aa8.49□□□□□ -1.05
PRKCA-205ENST00000583775 SCTRP47872 440 aa8.49□□□□□ -1.05
PRKCA-205ENST00000583775 AFAP1Q8N556 730 aa8.49□□□□□ -1.05
PRKCA-205ENST00000583775 PSMG3-AS1Q96PY0 264 aa8.49□□□□□ -1.05
PRKCA-205ENST00000583775 USP47Q96K76 1375 aa8.48□□□□□ -1.05
PRKCA-205ENST00000583775 POGZQ7Z3K3 1410 aa8.48□□□□□ -1.05
PRKCA-205ENST00000583775 WASLO00401 505 aaPredicted RBP8.48□□□□□ -1.05
PRKCA-205ENST00000583775 CDCA8Q53HL2 280 aa8.48□□□□□ -1.05
PRKCA-205ENST00000583775 SLC27A3Q5K4L6 730 aa8.48□□□□□ -1.05
PRKCA-205ENST00000583775 TBC1D9Q6ZT07 1266 aa8.48□□□□□ -1.05
PRKCA-205ENST00000583775 TIMMDC1Q9NPL8 285 aa8.48□□□□□ -1.05
PRKCA-205ENST00000583775 TFIP11Q9UBB9 837 aaKnown RBP8.48□□□□□ -1.05
PRKCA-205ENST00000583775 HRH3Q9Y5N1 445 aa8.48□□□□□ -1.05
PRKCA-205ENST00000583775 A2MP01023 1474 aa8.48□□□□□ -1.05
PRKCA-205ENST00000583775 KIAA1210Q9ULL0 1709 aa8.48□□□□□ -1.05
PRKCA-205ENST00000583775 HECW2Q9P2P5 1572 aa8.48□□□□□ -1.05
PRKCA-205ENST00000583775 ROCK2O75116 1388 aaKnown RBP8.48□□□□□ -1.05
PRKCA-205ENST00000583775 TAS1R3Q7RTX0 852 aa8.47□□□□□ -1.05
PRKCA-205ENST00000583775 NLRP3Q96P20 1036 aa8.47□□□□□ -1.05
PRKCA-205ENST00000583775 UCN2Q96RP3 112 aa8.47□□□□□ -1.05
PRKCA-205ENST00000583775 HIRIP3Q9BW71 556 aaPredicted RBP8.47□□□□□ -1.05
PRKCA-205ENST00000583775 OSBPL3Q9H4L5 887 aa8.47□□□□□ -1.05
PRKCA-205ENST00000583775 KANK1Q14678 1352 aa8.47□□□□□ -1.05
PRKCA-205ENST00000583775 RICTORQ6R327 1708 aa8.46□□□□□ -1.05
PRKCA-205ENST00000583775 EFCAB6Q5THR3 1501 aa8.46□□□□□ -1.05
PRKCA-205ENST00000583775 DEPDC4Q8N2C3 294 aa8.46□□□□□ -1.06
PRKCA-205ENST00000583775 EDARADDQ8WWZ3 215 aa8.46□□□□□ -1.06
PRKCA-205ENST00000583775 CCDC97Q96F63 343 aaPredicted RBP8.46□□□□□ -1.06
PRKCA-205ENST00000583775 SUV39H2Q9H5I1 410 aa8.46□□□□□ -1.06
PRKCA-205ENST00000583775 GDF2Q9UK05 429 aaPredicted RBP8.46□□□□□ -1.06
PRKCA-205ENST00000583775 C2CD2LO14523 706 aa8.45□□□□□ -1.06
PRKCA-205ENST00000583775 SKIP12755 728 aa8.45□□□□□ -1.06
PRKCA-205ENST00000583775 SLFNL1Q499Z3 407 aa8.45□□□□□ -1.06
PRKCA-205ENST00000583775 KIF7Q2M1P5 1343 aa8.45□□□□□ -1.06
PRKCA-205ENST00000583775 KIF1BO60333 1816 aa8.45□□□□□ -1.06
PRKCA-205ENST00000583775 FRMPD1Q5SYB0 1578 aa8.44□□□□□ -1.06
PRKCA-205ENST00000583775 RIMBP3CA6NJZ7 1639 aa8.44□□□□□ -1.06
PRKCA-205ENST00000583775 RIMBP3BA6NNM3 1639 aa8.44□□□□□ -1.06
PRKCA-205ENST00000583775 CLTCL1P53675 1640 aa8.44□□□□□ -1.06
PRKCA-205ENST00000583775 MADDQ8WXG6 1647 aa8.44□□□□□ -1.06
PRKCA-205ENST00000583775 RIMBP3Q9UFD9 1639 aa8.44□□□□□ -1.06
PRKCA-205ENST00000583775 IFT172Q9UG01 1749 aa8.44□□□□□ -1.06
PRKCA-205ENST00000583775 LMOD1P29536 600 aaPredicted RBP8.44□□□□□ -1.06
PRKCA-205ENST00000583775 CYP2U1Q7Z449 544 aa8.44□□□□□ -1.06
PRKCA-205ENST00000583775 RNF135Q8IUD6 432 aa8.44□□□□□ -1.06
PRKCA-205ENST00000583775 DCAF11Q8TEB1 546 aa8.44□□□□□ -1.06
PRKCA-205ENST00000583775 YTHDC1Q96MU7 727 aaKnown RBP8.44□□□□□ -1.06
PRKCA-205ENST00000583775 CDCA7Q9BWT1 371 aaPredicted RBP8.44□□□□□ -1.06
PRKCA-205ENST00000583775 NDFIP2Q9NV92 336 aa8.44□□□□□ -1.06
PRKCA-205ENST00000583775 PALM3A6NDB9 673 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms