RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ATP5J2-PTCD1G3V325 749 aa20.64■□□□□ 0.89
CDK5RAP3-228ENST00000583363 ZPR1O75312 459 aa20.64■□□□□ 0.89
CDK5RAP3-228ENST00000583363 TRIM28Q13263 835 aaKnown RBP20.64■□□□□ 0.89
CDK5RAP3-228ENST00000583363 BCL2L12Q9HB09 334 aa20.64■□□□□ 0.89
CDK5RAP3-228ENST00000583363 NEURL1BA8MQ27 555 aa20.63■□□□□ 0.89
CDK5RAP3-228ENST00000583363 CWF19L2Q2TBE0 894 aaKnown RBP20.63■□□□□ 0.89
CDK5RAP3-228ENST00000583363 ERICH6BQ5W0A0 696 aa20.63■□□□□ 0.89
CDK5RAP3-228ENST00000583363 USPL1Q5W0Q7 1092 aa20.63■□□□□ 0.89
CDK5RAP3-228ENST00000583363 SRP68Q9UHB9 627 aaKnown RBP20.63■□□□□ 0.89
CDK5RAP3-228ENST00000583363 CEP350Q5VT06 3117 aa20.63■□□□□ 0.89
CDK5RAP3-228ENST00000583363 ZNF34Q8IZ26 560 aa20.62■□□□□ 0.89
CDK5RAP3-228ENST00000583363 USP44Q9H0E7 712 aa20.62■□□□□ 0.89
CDK5RAP3-228ENST00000583363 CHMP4BQ9H444 224 aaKnown RBP20.62■□□□□ 0.89
CDK5RAP3-228ENST00000583363 ZNF652Q9Y2D9 606 aa20.62■□□□□ 0.89
CDK5RAP3-228ENST00000583363 IBTKQ9P2D0 1353 aaPredicted RBP20.61■□□□□ 0.89
CDK5RAP3-228ENST00000583363 USP42Q9H9J4 1324 aaKnown RBP20.61■□□□□ 0.89
CDK5RAP3-228ENST00000583363 GCKRQ14397 625 aa20.61■□□□□ 0.89
CDK5RAP3-228ENST00000583363 CCDC191Q8NCU4 936 aa20.61■□□□□ 0.89
CDK5RAP3-228ENST00000583363 ZBTB40Q9NUA8 1239 aa20.61■□□□□ 0.89
CDK5RAP3-228ENST00000583363 ARFGEF2Q9Y6D5 1785 aa20.61■□□□□ 0.89
CDK5RAP3-228ENST00000583363 AAMPQ13685 434 aa20.6■□□□□ 0.89
CDK5RAP3-228ENST00000583363 MEIS3Q99687 375 aa20.59■□□□□ 0.89
CDK5RAP3-228ENST00000583363 CWC25Q9NXE8 425 aaPredicted RBP20.59■□□□□ 0.89
CDK5RAP3-228ENST00000583363 NUP98P52948 1817 aa20.59■□□□□ 0.89
CDK5RAP3-228ENST00000583363 GPTP24298 496 aa20.58■□□□□ 0.89
CDK5RAP3-228ENST00000583363 NLRP10Q86W26 655 aa20.58■□□□□ 0.89
CDK5RAP3-228ENST00000583363 UTYO14607 1347 aa20.57■□□□□ 0.88
CDK5RAP3-228ENST00000583363 GNAI3P08754 354 aa20.57■□□□□ 0.88
CDK5RAP3-228ENST00000583363 GYS1P13807 737 aa20.57■□□□□ 0.88
CDK5RAP3-228ENST00000583363 TBC1D9BQ66K14 1250 aa20.57■□□□□ 0.88
CDK5RAP3-228ENST00000583363 C9orf78Q9NZ63 289 aaPredicted RBP20.57■□□□□ 0.88
CDK5RAP3-228ENST00000583363 NIP7Q9Y221 180 aaKnown RBP eCLIP20.57■□□□□ 0.88
CDK5RAP3-228ENST00000583363 GTF3C3Q9Y5Q9 886 aa20.57■□□□□ 0.88
CDK5RAP3-228ENST00000583363 H7C1W4 665 aa20.56■□□□□ 0.88
CDK5RAP3-228ENST00000583363 GRM8O00222 908 aa20.56■□□□□ 0.88
CDK5RAP3-228ENST00000583363 NBPF7P0C2Y1 421 aaPredicted RBP20.56■□□□□ 0.88
CDK5RAP3-228ENST00000583363 PARP10Q53GL7 1025 aa20.56■□□□□ 0.88
CDK5RAP3-228ENST00000583363 WWC3Q9ULE0 1092 aa20.56■□□□□ 0.88
CDK5RAP3-228ENST00000583363 UBN2Q6ZU65 1347 aa20.55■□□□□ 0.88
CDK5RAP3-228ENST00000583363 N4BP2Q86UW6 1770 aaPredicted RBP20.55■□□□□ 0.88
CDK5RAP3-228ENST00000583363 BCORQ6W2J9 1755 aa20.54■□□□□ 0.88
CDK5RAP3-228ENST00000583363 CASP7P55210 303 aa20.54■□□□□ 0.88
CDK5RAP3-228ENST00000583363 SUSD4Q5VX71 490 aa20.54■□□□□ 0.88
CDK5RAP3-228ENST00000583363 SETDB2Q96T68 719 aa20.54■□□□□ 0.88
CDK5RAP3-228ENST00000583363 GPBP1L1Q9HC44 474 aaPredicted RBP20.54■□□□□ 0.88
CDK5RAP3-228ENST00000583363 C4AP0C0L4 1744 aa20.53■□□□□ 0.88
CDK5RAP3-228ENST00000583363 GNAI2P04899 355 aa20.53■□□□□ 0.88
CDK5RAP3-228ENST00000583363 UBTFL1P0CB47 393 aaPredicted RBP20.53■□□□□ 0.88
CDK5RAP3-228ENST00000583363 TM4SF1P30408 202 aa20.53■□□□□ 0.88
CDK5RAP3-228ENST00000583363 BICDL1Q6ZP65 573 aa20.53■□□□□ 0.88
CDK5RAP3-228ENST00000583363 NLGN1Q8N2Q7 840 aa20.53■□□□□ 0.88
CDK5RAP3-228ENST00000583363 ZBTB38Q8NAP3 1195 aaPredicted RBP20.53■□□□□ 0.88
CDK5RAP3-228ENST00000583363 JARID2Q92833 1246 aaPredicted RBP20.53■□□□□ 0.88
CDK5RAP3-228ENST00000583363 PCCAP05165 728 aaPredicted RBP20.52■□□□□ 0.88
CDK5RAP3-228ENST00000583363 NFIXQ14938 502 aa20.52■□□□□ 0.88
CDK5RAP3-228ENST00000583363 PPP1R42Q7Z4L9 355 aa20.52■□□□□ 0.88
CDK5RAP3-228ENST00000583363 ZNF526Q8TF50 670 aaPredicted RBP20.52■□□□□ 0.88
CDK5RAP3-228ENST00000583363 UTP14AQ9BVJ6 771 aaKnown RBP20.52■□□□□ 0.88
CDK5RAP3-228ENST00000583363 HDAC5Q9UQL6 1122 aa20.52■□□□□ 0.88
CDK5RAP3-228ENST00000583363 PCDHB15Q9Y5E8 787 aa20.52■□□□□ 0.88
CDK5RAP3-228ENST00000583363 SCN7AQ01118 1682 aa20.51■□□□□ 0.87
CDK5RAP3-228ENST00000583363 C1orf115Q9H7X2 142 aa20.51■□□□□ 0.87
CDK5RAP3-228ENST00000583363 TRMT112Q9UI30 125 aaKnown RBP20.51■□□□□ 0.87
CDK5RAP3-228ENST00000583363 ANKRD36CQ5JPF3 1778 aa20.5■□□□□ 0.87
CDK5RAP3-228ENST00000583363 UBE3BQ7Z3V4 1068 aa20.5■□□□□ 0.87
CDK5RAP3-228ENST00000583363 FAM89AQ96GI7 184 aa20.5■□□□□ 0.87
CDK5RAP3-228ENST00000583363 PPP4R2Q9NY27 417 aa20.5■□□□□ 0.87
CDK5RAP3-228ENST00000583363 LRRFIP2Q9Y608 721 aaKnown RBP20.5■□□□□ 0.87
CDK5RAP3-228ENST00000583363 AFDNP55196 1824 aaKnown RBP20.5■□□□□ 0.87
CDK5RAP3-228ENST00000583363 NTSR2O95665 410 aa20.49■□□□□ 0.87
CDK5RAP3-228ENST00000583363 KAZALD1Q96I82 304 aa20.49■□□□□ 0.87
CDK5RAP3-228ENST00000583363 SUCLG2Q96I99 432 aa20.49■□□□□ 0.87
CDK5RAP3-228ENST00000583363 KIAA1551Q9HCM1 1747 aa20.48■□□□□ 0.87
CDK5RAP3-228ENST00000583363 FAM177BA6PVY3 158 aa20.48■□□□□ 0.87
CDK5RAP3-228ENST00000583363 RTL5Q5HYW3 569 aaPredicted RBP20.48■□□□□ 0.87
CDK5RAP3-228ENST00000583363 SYNE4Q8N205 404 aa20.48■□□□□ 0.87
CDK5RAP3-228ENST00000583363 CDHR2Q9BYE9 1310 aa20.48■□□□□ 0.87
CDK5RAP3-228ENST00000583363 KIF13BQ9NQT8 1826 aa20.48■□□□□ 0.87
CDK5RAP3-228ENST00000583363 TPTE2Q6XPS3 522 aa20.47■□□□□ 0.87
CDK5RAP3-228ENST00000583363 RPAP2Q8IXW5 612 aaPredicted RBP20.47■□□□□ 0.87
CDK5RAP3-228ENST00000583363 PLA2G12BQ9BX93 195 aa20.47■□□□□ 0.87
CDK5RAP3-228ENST00000583363 NYXQ9GZU5 481 aa20.47■□□□□ 0.87
CDK5RAP3-228ENST00000583363 SH3TC1Q8TE82 1336 aa20.47■□□□□ 0.87
CDK5RAP3-228ENST00000583363 MMP10P09238 476 aa20.46■□□□□ 0.87
CDK5RAP3-228ENST00000583363 ATP8B2P98198 1209 aa20.46■□□□□ 0.87
CDK5RAP3-228ENST00000583363 EPHA10Q5JZY3 1008 aa20.46■□□□□ 0.87
CDK5RAP3-228ENST00000583363 SLC10A5Q5PT55 438 aa20.46■□□□□ 0.87
CDK5RAP3-228ENST00000583363 CEP85Q6P2H3 762 aa20.46■□□□□ 0.87
CDK5RAP3-228ENST00000583363 NBPF5PQ86XG9 351 aaPredicted RBP20.46■□□□□ 0.87
CDK5RAP3-228ENST00000583363 POLRMTO00411 1230 aaKnown RBP20.45■□□□□ 0.86
CDK5RAP3-228ENST00000583363 IRS4O14654 1257 aaPredicted RBP20.45■□□□□ 0.86
CDK5RAP3-228ENST00000583363 SERPINB2P05120 415 aa20.45■□□□□ 0.86
CDK5RAP3-228ENST00000583363 FOXO4P98177 505 aa20.45■□□□□ 0.86
CDK5RAP3-228ENST00000583363 DDR1Q08345 913 aa20.45■□□□□ 0.86
CDK5RAP3-228ENST00000583363 IFFO2Q5TF58 517 aa20.45■□□□□ 0.86
CDK5RAP3-228ENST00000583363 SIRT2Q8IXJ6 389 aa20.45■□□□□ 0.86
CDK5RAP3-228ENST00000583363 ANKRD44Q8N8A2 993 aa20.45■□□□□ 0.86
CDK5RAP3-228ENST00000583363 CARMIL3Q8ND23 1372 aa20.45■□□□□ 0.86
CDK5RAP3-228ENST00000583363 HSPA6P17066 643 aa20.44■□□□□ 0.86
CDK5RAP3-228ENST00000583363 ERFEQ4G0M1 354 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms