RNA–Protein interactions for RNA: ENST00000583254.1

CTC1-211, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-211ENST00000583254 GCC1Q96CN9 775 aa9.59□□□□□ -0.87
CTC1-211ENST00000583254 SAGE1Q9NXZ1 904 aa9.59□□□□□ -0.87
CTC1-211ENST00000583254 ABCC12Q96J65 1359 aa9.59□□□□□ -0.87
CTC1-211ENST00000583254 TRPA1O75762 1119 aa9.58□□□□□ -0.88
CTC1-211ENST00000583254 CLEC4GQ6UXB4 293 aa9.58□□□□□ -0.88
CTC1-211ENST00000583254 TPTE2Q6XPS3 522 aa9.58□□□□□ -0.88
CTC1-211ENST00000583254 HPS5Q9UPZ3 1129 aa9.58□□□□□ -0.88
CTC1-211ENST00000583254 NIP7Q9Y221 180 aaKnown RBP eCLIP9.58□□□□□ -0.88
CTC1-211ENST00000583254 ZNF652Q9Y2D9 606 aa9.58□□□□□ -0.88
CTC1-211ENST00000583254 NPC1L1Q9UHC9 1359 aa9.58□□□□□ -0.88
CTC1-211ENST00000583254 MKI67P46013 3256 aaKnown RBP9.58□□□□□ -0.88
CTC1-211ENST00000583254 FAM155AB1AL88 458 aaPredicted RBP9.57□□□□□ -0.88
CTC1-211ENST00000583254 PPIP5K2O43314 1243 aa9.57□□□□□ -0.88
CTC1-211ENST00000583254 GMPSP49915 693 aaPredicted RBP9.57□□□□□ -0.88
CTC1-211ENST00000583254 CC2D2BQ6DHV5 1058 aa9.57□□□□□ -0.88
CTC1-211ENST00000583254 DLK2Q6UY11 383 aa9.57□□□□□ -0.88
CTC1-211ENST00000583254 MORC1Q86VD1 984 aa9.57□□□□□ -0.88
CTC1-211ENST00000583254 TRPM4Q8TD43 1214 aa9.57□□□□□ -0.88
CTC1-211ENST00000583254 FMNL2Q96PY5 1086 aa9.57□□□□□ -0.88
CTC1-211ENST00000583254 RNF186Q9NXI6 227 aa9.57□□□□□ -0.88
CTC1-211ENST00000583254 TCERG1O14776 1098 aaKnown RBP9.56□□□□□ -0.88
CTC1-211ENST00000583254 KCNQ3O43525 872 aa9.56□□□□□ -0.88
CTC1-211ENST00000583254 HIRAP54198 1017 aaPredicted RBP9.56□□□□□ -0.88
CTC1-211ENST00000583254 KIF23Q02241 960 aaPredicted RBP9.56□□□□□ -0.88
CTC1-211ENST00000583254 CXCL9Q07325 125 aa9.56□□□□□ -0.88
CTC1-211ENST00000583254 TEFQ10587 303 aa9.56□□□□□ -0.88
CTC1-211ENST00000583254 AOC3Q16853 763 aa9.56□□□□□ -0.88
CTC1-211ENST00000583254 CRY2Q49AN0 593 aa9.56□□□□□ -0.88
CTC1-211ENST00000583254 RGMBQ6NW40 437 aa9.56□□□□□ -0.88
CTC1-211ENST00000583254 CDC37L1Q7L3B6 337 aa9.56□□□□□ -0.88
CTC1-211ENST00000583254 PGAP2Q9UHJ9 254 aa9.56□□□□□ -0.88
CTC1-211ENST00000583254 RIC1Q4ADV7 1423 aa9.56□□□□□ -0.88
CTC1-211ENST00000583254 SHTN1A0MZ66 631 aa9.55□□□□□ -0.88
CTC1-211ENST00000583254 PRAMEF22A3QJZ6 481 aa9.55□□□□□ -0.88
CTC1-211ENST00000583254 GTF2E1P29083 439 aaPredicted RBP9.55□□□□□ -0.88
CTC1-211ENST00000583254 USP48Q86UV5 1035 aa9.55□□□□□ -0.88
CTC1-211ENST00000583254 NUTM1Q86Y26 1132 aa9.55□□□□□ -0.88
CTC1-211ENST00000583254 RPGRQ92834 1020 aaKnown RBP9.55□□□□□ -0.88
CTC1-211ENST00000583254 USP16Q9Y5T5 823 aa9.55□□□□□ -0.88
CTC1-211ENST00000583254 PPEF1O14829 653 aaPredicted RBP9.54□□□□□ -0.88
CTC1-211ENST00000583254 HLFQ16534 295 aa9.54□□□□□ -0.88
CTC1-211ENST00000583254 IL17REQ8NFR9 667 aa9.54□□□□□ -0.88
CTC1-211ENST00000583254 ZC3H15Q8WU90 426 aaKnown RBP9.54□□□□□ -0.88
CTC1-211ENST00000583254 PANK3Q9H999 370 aa9.54□□□□□ -0.88
CTC1-211ENST00000583254 GBA2Q9HCG7 927 aaPredicted RBP9.54□□□□□ -0.88
CTC1-211ENST00000583254 CDHR2Q9BYE9 1310 aa9.54□□□□□ -0.88
CTC1-211ENST00000583254 RAD17O75943 681 aa9.53□□□□□ -0.88
CTC1-211ENST00000583254 FXR1P51114 621 aaKnown RBP eCLIP9.53□□□□□ -0.88
CTC1-211ENST00000583254 ZNF157P51786 506 aaPredicted RBP9.53□□□□□ -0.88
CTC1-211ENST00000583254 GRIPAP1Q4V328 841 aa9.53□□□□□ -0.88
CTC1-211ENST00000583254 BCL2L13Q9BXK5 485 aa9.53□□□□□ -0.88
CTC1-211ENST00000583254 ZNRF3Q9ULT6 936 aa9.53□□□□□ -0.88
CTC1-211ENST00000583254 NUP98P52948 1817 aa9.53□□□□□ -0.88
CTC1-211ENST00000583254 POLR2AP24928 1970 aaKnown RBP9.53□□□□□ -0.88
CTC1-211ENST00000583254 NBPF26B4DH59 902 aa9.52□□□□□ -0.89
CTC1-211ENST00000583254 SLC10A3P09131 477 aa9.52□□□□□ -0.89
CTC1-211ENST00000583254 HOXA10P31260 410 aaPredicted RBP9.52□□□□□ -0.89
CTC1-211ENST00000583254 NBPF10Q6P3W6 841 aaKnown RBP9.52□□□□□ -0.89
CTC1-211ENST00000583254 C2orf69Q8N8R5 385 aa9.52□□□□□ -0.89
CTC1-211ENST00000583254 CCDC102AQ96A19 550 aa9.52□□□□□ -0.89
CTC1-211ENST00000583254 CSRNP1Q96S65 589 aa9.52□□□□□ -0.89
CTC1-211ENST00000583254 HTTP42858 3142 aa9.52□□□□□ -0.89
CTC1-211ENST00000583254 KIF7Q2M1P5 1343 aa9.52□□□□□ -0.89
CTC1-211ENST00000583254 LAMB4A4D0S4 1761 aa9.51□□□□□ -0.89
CTC1-211ENST00000583254 BTBD11A6QL63 1104 aa9.51□□□□□ -0.89
CTC1-211ENST00000583254 GNAT3A8MTJ3 354 aa9.51□□□□□ -0.89
CTC1-211ENST00000583254 ADM5C9JUS6 153 aa9.51□□□□□ -0.89
CTC1-211ENST00000583254 RGL2O15211 777 aa9.51□□□□□ -0.89
CTC1-211ENST00000583254 PKN2Q16513 984 aaKnown RBP9.51□□□□□ -0.89
CTC1-211ENST00000583254 KRT26Q7Z3Y9 468 aa9.51□□□□□ -0.89
CTC1-211ENST00000583254 MICALL2Q8IY33 904 aa9.51□□□□□ -0.89
CTC1-211ENST00000583254 RBM17Q96I25 401 aaKnown RBP9.51□□□□□ -0.89
CTC1-211ENST00000583254 NYXQ9GZU5 481 aa9.51□□□□□ -0.89
CTC1-211ENST00000583254 CNOT7Q9UIV1 285 aaKnown RBP9.51□□□□□ -0.89
CTC1-211ENST00000583254 HDAC9Q9UKV0 1011 aa9.51□□□□□ -0.89
CTC1-211ENST00000583254 CEMIPQ8WUJ3 1361 aa9.5□□□□□ -0.89
CTC1-211ENST00000583254 C3orf67Q6ZVT6 689 aa9.5□□□□□ -0.89
CTC1-211ENST00000583254 SAMD7Q7Z3H4 446 aa9.5□□□□□ -0.89
CTC1-211ENST00000583254 ZNF296Q8WUU4 475 aaPredicted RBP9.5□□□□□ -0.89
CTC1-211ENST00000583254 CRAMP1Q96RY5 1269 aa9.5□□□□□ -0.89
CTC1-211ENST00000583254 YDJCA8MPS7 323 aa9.49□□□□□ -0.89
CTC1-211ENST00000583254 H7C1D1 291 aa9.49□□□□□ -0.89
CTC1-211ENST00000583254 DIAPH1O60610 1272 aaKnown RBP9.49□□□□□ -0.89
CTC1-211ENST00000583254 EGFRP00533 1210 aa9.49□□□□□ -0.89
CTC1-211ENST00000583254 SNRPA1P09661 255 aaKnown RBP9.49□□□□□ -0.89
CTC1-211ENST00000583254 TNIP1Q15025 636 aa9.49□□□□□ -0.89
CTC1-211ENST00000583254 TBC1D10BQ4KMP7 808 aaPredicted RBP9.49□□□□□ -0.89
CTC1-211ENST00000583254 RASAL3Q86YV0 1011 aa9.49□□□□□ -0.89
CTC1-211ENST00000583254 GAS2L2Q8NHY3 880 aa9.49□□□□□ -0.89
CTC1-211ENST00000583254 VPS33BQ9H267 617 aa9.49□□□□□ -0.89
CTC1-211ENST00000583254 ZBTB12Q9Y330 459 aaPredicted RBP9.49□□□□□ -0.89
CTC1-211ENST00000583254 ATP6V0A2Q9Y487 856 aa9.49□□□□□ -0.89
CTC1-211ENST00000583254 UBN2Q6ZU65 1347 aa9.49□□□□□ -0.89
CTC1-211ENST00000583254 IBTKQ9P2D0 1353 aaPredicted RBP9.49□□□□□ -0.89
CTC1-211ENST00000583254 CENPFP49454 3210 aa9.48□□□□□ -0.89
CTC1-211ENST00000583254 LAMB2P55268 1798 aa9.48□□□□□ -0.89
CTC1-211ENST00000583254 PAPPA2Q9BXP8 1791 aa9.48□□□□□ -0.89
CTC1-211ENST00000583254 TBC1D8O95759 1140 aa9.48□□□□□ -0.89
CTC1-211ENST00000583254 GPTP24298 496 aa9.48□□□□□ -0.89
CTC1-211ENST00000583254 KIAA2012Q0VF49 1180 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms