RNA–Protein interactions for RNA: ENST00000583206.1

TVP23C-209, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-209ENST00000583206 SIPA1L3O60292 1781 aaPredicted RBP12.71□□□□□ -0.38
TVP23C-209ENST00000583206 LMOD1P29536 600 aaPredicted RBP12.7□□□□□ -0.38
TVP23C-209ENST00000583206 HOXA10P31260 410 aaPredicted RBP12.7□□□□□ -0.38
TVP23C-209ENST00000583206 CC2D2BQ6DHV5 1058 aa12.7□□□□□ -0.38
TVP23C-209ENST00000583206 NPM2Q86SE8 214 aaKnown RBP12.7□□□□□ -0.38
TVP23C-209ENST00000583206 CFAP44Q96MT7 982 aa12.7□□□□□ -0.38
TVP23C-209ENST00000583206 TIMELESSQ9UNS1 1208 aa12.7□□□□□ -0.38
TVP23C-209ENST00000583206 KNSTRNQ9Y448 316 aa12.7□□□□□ -0.38
TVP23C-209ENST00000583206 CELF2O95319 508 aaKnown RBP12.69□□□□□ -0.38
TVP23C-209ENST00000583206 HSPA5P11021 654 aaKnown RBP12.69□□□□□ -0.38
TVP23C-209ENST00000583206 CIAPIN1Q6FI81 312 aa12.69□□□□□ -0.38
TVP23C-209ENST00000583206 GPRC5DQ9NZD1 345 aa12.69□□□□□ -0.38
TVP23C-209ENST00000583206 ZNF652Q9Y2D9 606 aa12.69□□□□□ -0.38
TVP23C-209ENST00000583206 TRPM7Q96QT4 1865 aa12.68□□□□□ -0.38
TVP23C-209ENST00000583206 FAM177BA6PVY3 158 aa12.68□□□□□ -0.38
TVP23C-209ENST00000583206 BTBD11A6QL63 1104 aa12.68□□□□□ -0.38
TVP23C-209ENST00000583206 HIRAP54198 1017 aaPredicted RBP12.68□□□□□ -0.38
TVP23C-209ENST00000583206 GAS2L2Q8NHY3 880 aa12.68□□□□□ -0.38
TVP23C-209ENST00000583206 PHACTR3Q96KR7 559 aa12.68□□□□□ -0.38
TVP23C-209ENST00000583206 GLIS2Q9BZE0 524 aaPredicted RBP12.68□□□□□ -0.38
TVP23C-209ENST00000583206 ADARB2Q9NS39 739 aaKnown RBP12.68□□□□□ -0.38
TVP23C-209ENST00000583206 ABCC12Q96J65 1359 aa12.68□□□□□ -0.38
TVP23C-209ENST00000583206 PER1O15534 1290 aaPredicted RBP12.67□□□□□ -0.38
TVP23C-209ENST00000583206 SNRPA1P09661 255 aaKnown RBP12.67□□□□□ -0.38
TVP23C-209ENST00000583206 CXCL9Q07325 125 aa12.67□□□□□ -0.38
TVP23C-209ENST00000583206 LARGE2Q8N3Y3 721 aa12.67□□□□□ -0.38
TVP23C-209ENST00000583206 EIF4G2P78344 907 aaKnown RBP eCLIP12.66□□□□□ -0.38
TVP23C-209ENST00000583206 GRIPAP1Q4V328 841 aa12.66□□□□□ -0.38
TVP23C-209ENST00000583206 NUTM1Q86Y26 1132 aa12.66□□□□□ -0.38
TVP23C-209ENST00000583206 COL3A1P02461 1466 aaPredicted RBP12.65□□□□□ -0.38
TVP23C-209ENST00000583206 KIF7Q2M1P5 1343 aa12.65□□□□□ -0.38
TVP23C-209ENST00000583206 C3orf67Q6ZVT6 689 aa12.65□□□□□ -0.38
TVP23C-209ENST00000583206 CRAMP1Q96RY5 1269 aa12.65□□□□□ -0.38
TVP23C-209ENST00000583206 FAM155AB1AL88 458 aaPredicted RBP12.64□□□□□ -0.39
TVP23C-209ENST00000583206 SOX10P56693 466 aa12.64□□□□□ -0.39
TVP23C-209ENST00000583206 DLK2Q6UY11 383 aa12.64□□□□□ -0.39
TVP23C-209ENST00000583206 NIM1KQ8IY84 436 aa12.64□□□□□ -0.39
TVP23C-209ENST00000583206 ZC3H15Q8WU90 426 aaKnown RBP12.64□□□□□ -0.39
TVP23C-209ENST00000583206 NPC1L1Q9UHC9 1359 aa12.64□□□□□ -0.39
TVP23C-209ENST00000583206 RIC1Q4ADV7 1423 aa12.63□□□□□ -0.39
TVP23C-209ENST00000583206 GTF2E1P29083 439 aaPredicted RBP12.63□□□□□ -0.39
TVP23C-209ENST00000583206 GMPSP49915 693 aaPredicted RBP12.63□□□□□ -0.39
TVP23C-209ENST00000583206 NOGQ13253 232 aa12.63□□□□□ -0.39
TVP23C-209ENST00000583206 PRPF38BQ5VTL8 546 aaKnown RBP12.63□□□□□ -0.39
TVP23C-209ENST00000583206 RTFDC1Q9BY42 306 aaPredicted RBP12.63□□□□□ -0.39
TVP23C-209ENST00000583206 VPS33BQ9H267 617 aa12.63□□□□□ -0.39
TVP23C-209ENST00000583206 ZNRF3Q9ULT6 936 aa12.63□□□□□ -0.39
TVP23C-209ENST00000583206 UBN2Q6ZU65 1347 aa12.62□□□□□ -0.39
TVP23C-209ENST00000583206 MKI67P46013 3256 aaKnown RBP12.62□□□□□ -0.39
TVP23C-209ENST00000583206 SHTN1A0MZ66 631 aa12.62□□□□□ -0.39
TVP23C-209ENST00000583206 ERVV-1B6SEH8 477 aa12.62□□□□□ -0.39
TVP23C-209ENST00000583206 PPIP5K2O43314 1243 aa12.62□□□□□ -0.39
TVP23C-209ENST00000583206 AOC3Q16853 763 aa12.62□□□□□ -0.39
TVP23C-209ENST00000583206 CDC37L1Q7L3B6 337 aa12.62□□□□□ -0.39
TVP23C-209ENST00000583206 TRPM4Q8TD43 1214 aa12.62□□□□□ -0.39
TVP23C-209ENST00000583206 NYXQ9GZU5 481 aa12.62□□□□□ -0.39
TVP23C-209ENST00000583206 TCERG1O14776 1098 aaKnown RBP12.61□□□□□ -0.39
TVP23C-209ENST00000583206 PPEF1O14829 653 aaPredicted RBP12.61□□□□□ -0.39
TVP23C-209ENST00000583206 U2SURPO15042 1029 aaKnown RBP12.61□□□□□ -0.39
TVP23C-209ENST00000583206 SUSD4Q5VX71 490 aa12.61□□□□□ -0.39
TVP23C-209ENST00000583206 RPGRQ92834 1020 aaKnown RBP12.61□□□□□ -0.39
TVP23C-209ENST00000583206 RSPH6AQ9H0K4 717 aa12.61□□□□□ -0.39
TVP23C-209ENST00000583206 SAGE1Q9NXZ1 904 aa12.61□□□□□ -0.39
TVP23C-209ENST00000583206 ATP6V0A2Q9Y487 856 aa12.61□□□□□ -0.39
TVP23C-209ENST00000583206 HUNKP57058 714 aa12.6□□□□□ -0.39
TVP23C-209ENST00000583206 CC2D1BQ5T0F9 858 aaKnown RBP12.6□□□□□ -0.39
TVP23C-209ENST00000583206 TTLL7Q6ZT98 887 aa12.6□□□□□ -0.39
TVP23C-209ENST00000583206 MCM10Q7L590 875 aa12.6□□□□□ -0.39
TVP23C-209ENST00000583206 USP48Q86UV5 1035 aa12.6□□□□□ -0.39
TVP23C-209ENST00000583206 ZNF34Q8IZ26 560 aa12.6□□□□□ -0.39
TVP23C-209ENST00000583206 RBM17Q96I25 401 aaKnown RBP12.6□□□□□ -0.39
TVP23C-209ENST00000583206 ZNF408Q9H9D4 720 aa12.6□□□□□ -0.39
TVP23C-209ENST00000583206 RNF186Q9NXI6 227 aa12.6□□□□□ -0.39
TVP23C-209ENST00000583206 IBTKQ9P2D0 1353 aaPredicted RBP12.59□□□□□ -0.39
TVP23C-209ENST00000583206 YDJCA8MPS7 323 aa12.59□□□□□ -0.39
TVP23C-209ENST00000583206 NTSR2O95665 410 aa12.59□□□□□ -0.39
TVP23C-209ENST00000583206 PRKAR2BP31323 418 aa12.59□□□□□ -0.39
TVP23C-209ENST00000583206 KIF23Q02241 960 aaPredicted RBP12.59□□□□□ -0.39
TVP23C-209ENST00000583206 MAP3K15Q6ZN16 1313 aa12.59□□□□□ -0.39
TVP23C-209ENST00000583206 CDHR2Q9BYE9 1310 aa12.59□□□□□ -0.39
TVP23C-209ENST00000583206 RAD17O75943 681 aa12.58□□□□□ -0.4
TVP23C-209ENST00000583206 GPTP24298 496 aa12.58□□□□□ -0.4
TVP23C-209ENST00000583206 KIAA2012Q0VF49 1180 aa12.58□□□□□ -0.4
TVP23C-209ENST00000583206 DCTN1Q14203 1278 aa12.58□□□□□ -0.4
TVP23C-209ENST00000583206 SLC10A5Q5PT55 438 aa12.58□□□□□ -0.4
TVP23C-209ENST00000583206 RGMBQ6NW40 437 aa12.58□□□□□ -0.4
TVP23C-209ENST00000583206 CSRNP1Q96S65 589 aa12.58□□□□□ -0.4
TVP23C-209ENST00000583206 CNOT7Q9UIV1 285 aaKnown RBP12.58□□□□□ -0.4
TVP23C-209ENST00000583206 TRPA1O75762 1119 aa12.57□□□□□ -0.4
TVP23C-209ENST00000583206 EGFRP00533 1210 aa12.57□□□□□ -0.4
TVP23C-209ENST00000583206 NGEFQ8N5V2 710 aa12.57□□□□□ -0.4
TVP23C-209ENST00000583206 MIS18AQ9NYP9 233 aa12.57□□□□□ -0.4
TVP23C-209ENST00000583206 TAF7Q15545 349 aaPredicted RBP12.56□□□□□ -0.4
TVP23C-209ENST00000583206 SP8Q8IXZ3 490 aa12.56□□□□□ -0.4
TVP23C-209ENST00000583206 CCDC102AQ96A19 550 aa12.56□□□□□ -0.4
TVP23C-209ENST00000583206 ABCC4O15439 1325 aa12.56□□□□□ -0.4
TVP23C-209ENST00000583206 TNIP1Q15025 636 aa12.55□□□□□ -0.4
TVP23C-209ENST00000583206 SAMD7Q7Z3H4 446 aa12.55□□□□□ -0.4
TVP23C-209ENST00000583206 LRP10Q7Z4F1 713 aa12.55□□□□□ -0.4
TVP23C-209ENST00000583206 CTU1Q7Z7A3 348 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms