RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 PHAXQ9H814 394 aaKnown RBP18.01■□□□□ 0.47
GGA3-215ENST00000582821 SLX4Q8IY92 1834 aa18■□□□□ 0.47
GGA3-215ENST00000582821 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
GGA3-215ENST00000582821 ARFGEF2Q9Y6D5 1785 aa17.99■□□□□ 0.47
GGA3-215ENST00000582821 VAMP4O75379 141 aa17.99■□□□□ 0.47
GGA3-215ENST00000582821 ALDH1B1P30837 517 aa17.99■□□□□ 0.47
GGA3-215ENST00000582821 MYH16Q9H6N6 1097 aa17.99■□□□□ 0.47
GGA3-215ENST00000582821 ABCC12Q96J65 1359 aa17.99■□□□□ 0.47
GGA3-215ENST00000582821 HOXA10P31260 410 aaPredicted RBP17.98■□□□□ 0.47
GGA3-215ENST00000582821 DIEXFQ68CQ4 756 aaKnown RBP17.98■□□□□ 0.47
GGA3-215ENST00000582821 PRPF40BQ6NWY9 871 aaKnown RBP17.98■□□□□ 0.47
GGA3-215ENST00000582821 RIC3Q7Z5B4 369 aa17.98■□□□□ 0.47
GGA3-215ENST00000582821 C7orf43Q8WVR3 580 aa17.98■□□□□ 0.47
GGA3-215ENST00000582821 STK31Q9BXU1 1019 aa17.98■□□□□ 0.47
GGA3-215ENST00000582821 C21orf2O43822 256 aa17.97■□□□□ 0.47
GGA3-215ENST00000582821 EXOSC9Q06265 439 aaKnown RBP17.97■□□□□ 0.47
GGA3-215ENST00000582821 SOGA3Q5TF21 947 aa17.97■□□□□ 0.47
GGA3-215ENST00000582821 DDX58O95786 925 aaKnown RBP17.96■□□□□ 0.47
GGA3-215ENST00000582821 C9orf131Q5VYM1 1079 aa17.96■□□□□ 0.47
GGA3-215ENST00000582821 NLRP3Q96P20 1036 aa17.96■□□□□ 0.47
GGA3-215ENST00000582821 TRMT112Q9UI30 125 aaKnown RBP17.96■□□□□ 0.47
GGA3-215ENST00000582821 FER1L6Q2WGJ9 1857 aa17.96■□□□□ 0.47
GGA3-215ENST00000582821 TNRC6CQ9HCJ0 1690 aaKnown RBP17.96■□□□□ 0.47
GGA3-215ENST00000582821 CACNA1SQ13698 1873 aa17.95■□□□□ 0.46
GGA3-215ENST00000582821 CCDC88AQ3V6T2 1871 aa17.95■□□□□ 0.46
GGA3-215ENST00000582821 SLC4A2P04920 1241 aa17.95■□□□□ 0.46
GGA3-215ENST00000582821 KSR2Q6VAB6 950 aa17.95■□□□□ 0.46
GGA3-215ENST00000582821 CRAMP1Q96RY5 1269 aa17.95■□□□□ 0.46
GGA3-215ENST00000582821 SH3TC1Q8TE82 1336 aa17.95■□□□□ 0.46
GGA3-215ENST00000582821 ATP5J2-PTCD1G3V325 749 aa17.94■□□□□ 0.46
GGA3-215ENST00000582821 NFKBIEO00221 500 aa17.94■□□□□ 0.46
GGA3-215ENST00000582821 LMNB1P20700 586 aa17.94■□□□□ 0.46
GGA3-215ENST00000582821 METTL22Q9BUU2 404 aaPredicted RBP17.94■□□□□ 0.46
GGA3-215ENST00000582821 LTBP3Q9NS15 1303 aa17.94■□□□□ 0.46
GGA3-215ENST00000582821 C3orf67Q6ZVT6 689 aa17.93■□□□□ 0.46
GGA3-215ENST00000582821 SYNE4Q8N205 404 aa17.93■□□□□ 0.46
GGA3-215ENST00000582821 RPGRQ92834 1020 aaKnown RBP17.93■□□□□ 0.46
GGA3-215ENST00000582821 RBM17Q96I25 401 aaKnown RBP17.93■□□□□ 0.46
GGA3-215ENST00000582821 PI4KAP2A4QPH2 592 aa17.92■□□□□ 0.46
GGA3-215ENST00000582821 TCERG1O14776 1098 aaKnown RBP17.92■□□□□ 0.46
GGA3-215ENST00000582821 PRELPP51888 382 aa17.92■□□□□ 0.46
GGA3-215ENST00000582821 RASSF7Q02833 373 aa17.92■□□□□ 0.46
GGA3-215ENST00000582821 MIER1Q8N108 512 aa17.92■□□□□ 0.46
GGA3-215ENST00000582821 PI4KAP1Q8N8J0 262 aa17.92■□□□□ 0.46
GGA3-215ENST00000582821 CCDC191Q8NCU4 936 aa17.92■□□□□ 0.46
GGA3-215ENST00000582821 RNF181Q9P0P0 153 aa17.92■□□□□ 0.46
GGA3-215ENST00000582821 ZNF219Q9P2Y4 722 aaPredicted RBP17.92■□□□□ 0.46
GGA3-215ENST00000582821 ZC3H4Q9UPT8 1303 aaKnown RBP17.92■□□□□ 0.46
GGA3-215ENST00000582821 E9PSI1 815 aa17.91■□□□□ 0.46
GGA3-215ENST00000582821 HCLS1P14317 486 aaPredicted RBP17.91■□□□□ 0.46
GGA3-215ENST00000582821 CCDC93Q567U6 631 aa17.91■□□□□ 0.46
GGA3-215ENST00000582821 CC2D2BQ6DHV5 1058 aa17.91■□□□□ 0.46
GGA3-215ENST00000582821 G2E3Q7L622 706 aa17.91■□□□□ 0.46
GGA3-215ENST00000582821 RTKN2Q8IZC4 609 aa17.91■□□□□ 0.46
GGA3-215ENST00000582821 MYD88Q99836 296 aa17.91■□□□□ 0.46
GGA3-215ENST00000582821 GPBP1L1Q9HC44 474 aaPredicted RBP17.91■□□□□ 0.46
GGA3-215ENST00000582821 MAP3K2Q9Y2U5 619 aa17.91■□□□□ 0.46
GGA3-215ENST00000582821 DICER1Q9UPY3 1922 aaKnown RBP17.91■□□□□ 0.46
GGA3-215ENST00000582821 SLFN5Q08AF3 891 aa17.9■□□□□ 0.46
GGA3-215ENST00000582821 GRIPAP1Q4V328 841 aa17.9■□□□□ 0.46
GGA3-215ENST00000582821 ZBTB38Q8NAP3 1195 aaPredicted RBP17.9■□□□□ 0.46
GGA3-215ENST00000582821 FAM89AQ96GI7 184 aa17.9■□□□□ 0.46
GGA3-215ENST00000582821 TAOK3Q9H2K8 898 aa17.9■□□□□ 0.46
GGA3-215ENST00000582821 LAMB2P55268 1798 aa17.89■□□□□ 0.45
GGA3-215ENST00000582821 FLIIQ13045 1269 aa17.89■□□□□ 0.45
GGA3-215ENST00000582821 SF3B3Q15393 1217 aaKnown RBP17.89■□□□□ 0.45
GGA3-215ENST00000582821 PCCAP05165 728 aaPredicted RBP17.88■□□□□ 0.45
GGA3-215ENST00000582821 HSP90B1P14625 803 aaKnown RBP17.88■□□□□ 0.45
GGA3-215ENST00000582821 TRMT2AQ8IZ69 625 aaKnown RBP17.88■□□□□ 0.45
GGA3-215ENST00000582821 CWC25Q9NXE8 425 aaPredicted RBP17.88■□□□□ 0.45
GGA3-215ENST00000582821 DDX60Q8IY21 1712 aaKnown RBP17.87■□□□□ 0.45
GGA3-215ENST00000582821 BBOX1O75936 387 aa17.87■□□□□ 0.45
GGA3-215ENST00000582821 IGKV5-2P06315 115 aa17.87■□□□□ 0.45
GGA3-215ENST00000582821 FKBP4Q02790 459 aaKnown RBP eCLIP17.87■□□□□ 0.45
GGA3-215ENST00000582821 NEXNQ0ZGT2 675 aa17.87■□□□□ 0.45
GGA3-215ENST00000582821 IRS4O14654 1257 aaPredicted RBP17.86■□□□□ 0.45
GGA3-215ENST00000582821 OLFM4Q6UX06 510 aa17.86■□□□□ 0.45
GGA3-215ENST00000582821 PSMD1Q99460 953 aa17.86■□□□□ 0.45
GGA3-215ENST00000582821 SNED1Q8TER0 1413 aa17.86■□□□□ 0.45
GGA3-215ENST00000582821 ABCC4O15439 1325 aa17.85■□□□□ 0.45
GGA3-215ENST00000582821 FKBP5Q13451 457 aaPredicted RBP17.85■□□□□ 0.45
GGA3-215ENST00000582821 DDX46Q7L014 1031 aaKnown RBP17.85■□□□□ 0.45
GGA3-215ENST00000582821 ZNF526Q8TF50 670 aaPredicted RBP17.85■□□□□ 0.45
GGA3-215ENST00000582821 DNAAF4Q8WXU2 420 aa17.85■□□□□ 0.45
GGA3-215ENST00000582821 ZNF428Q96B54 188 aa17.85■□□□□ 0.45
GGA3-215ENST00000582821 ATP6V0A2Q9Y487 856 aa17.85■□□□□ 0.45
GGA3-215ENST00000582821 KDM2BQ8NHM5 1336 aa17.84■□□□□ 0.45
GGA3-215ENST00000582821 CDHR2Q9BYE9 1310 aa17.84■□□□□ 0.45
GGA3-215ENST00000582821 NEURL1BA8MQ27 555 aa17.84■□□□□ 0.45
GGA3-215ENST00000582821 PPEF1O14829 653 aaPredicted RBP17.84■□□□□ 0.45
GGA3-215ENST00000582821 GRAPQ13588 217 aa17.84■□□□□ 0.45
GGA3-215ENST00000582821 GRAPLQ8TC17 118 aaPredicted RBP17.84■□□□□ 0.45
GGA3-215ENST00000582821 CDCA7LQ96GN5 454 aa17.84■□□□□ 0.45
GGA3-215ENST00000582821 GLTPD2A6NH11 291 aa17.83■□□□□ 0.44
GGA3-215ENST00000582821 KIF3CO14782 793 aa17.83■□□□□ 0.44
GGA3-215ENST00000582821 RTL5Q5HYW3 569 aaPredicted RBP17.83■□□□□ 0.44
GGA3-215ENST00000582821 TMC4Q7Z404 712 aa17.83■□□□□ 0.44
GGA3-215ENST00000582821 SP8Q8IXZ3 490 aa17.83■□□□□ 0.44
GGA3-215ENST00000582821 TAF1P21675 1872 aa17.83■□□□□ 0.44
GGA3-215ENST00000582821 H7C1W4 665 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms