RNA–Protein interactions for RNA: ENST00000582797.5

IFT20-212, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-212ENST00000582797 GAS2L2Q8NHY3 880 aa20.39■□□□□ 0.85
IFT20-212ENST00000582797 TIMELESSQ9UNS1 1208 aa20.39■□□□□ 0.85
IFT20-212ENST00000582797 NBPF26B4DH59 902 aa20.38■□□□□ 0.85
IFT20-212ENST00000582797 NBPF10Q6P3W6 841 aaKnown RBP20.38■□□□□ 0.85
IFT20-212ENST00000582797 NBPF15Q8N660 670 aa20.38■□□□□ 0.85
IFT20-212ENST00000582797 LAMB4A4D0S4 1761 aa20.38■□□□□ 0.85
IFT20-212ENST00000582797 U2SURPO15042 1029 aaKnown RBP20.37■□□□□ 0.85
IFT20-212ENST00000582797 HLFQ16534 295 aa20.37■□□□□ 0.85
IFT20-212ENST00000582797 USP50Q70EL3 339 aaPredicted RBP20.37■□□□□ 0.85
IFT20-212ENST00000582797 DGKZQ13574 1117 aa20.36■□□□□ 0.85
IFT20-212ENST00000582797 LARGE2Q8N3Y3 721 aa20.36■□□□□ 0.85
IFT20-212ENST00000582797 GTF2E1P29083 439 aaPredicted RBP20.35■□□□□ 0.85
IFT20-212ENST00000582797 CRY2Q49AN0 593 aa20.35■□□□□ 0.85
IFT20-212ENST00000582797 SAPCD2Q86UD0 394 aa20.35■□□□□ 0.85
IFT20-212ENST00000582797 NUTM1Q86Y26 1132 aa20.35■□□□□ 0.85
IFT20-212ENST00000582797 CELF2O95319 508 aaKnown RBP20.34■□□□□ 0.85
IFT20-212ENST00000582797 PHACTR3Q96KR7 559 aa20.34■□□□□ 0.85
IFT20-212ENST00000582797 TCERG1O14776 1098 aaKnown RBP20.33■□□□□ 0.85
IFT20-212ENST00000582797 CA12O43570 354 aa20.33■□□□□ 0.85
IFT20-212ENST00000582797 SNRPA1P09661 255 aaKnown RBP20.33■□□□□ 0.85
IFT20-212ENST00000582797 CC2D1BQ5T0F9 858 aaKnown RBP20.33■□□□□ 0.85
IFT20-212ENST00000582797 CC2D2BQ6DHV5 1058 aa20.33■□□□□ 0.85
IFT20-212ENST00000582797 CIAPIN1Q6FI81 312 aa20.33■□□□□ 0.85
IFT20-212ENST00000582797 BRPF1P55201 1214 aaPredicted RBP20.32■□□□□ 0.84
IFT20-212ENST00000582797 TRIM26Q12899 539 aaPredicted RBP20.32■□□□□ 0.84
IFT20-212ENST00000582797 GLIS2Q9BZE0 524 aaPredicted RBP20.32■□□□□ 0.84
IFT20-212ENST00000582797 RIC1Q4ADV7 1423 aa20.31■□□□□ 0.84
IFT20-212ENST00000582797 RGL2O15211 777 aa20.31■□□□□ 0.84
IFT20-212ENST00000582797 NIM1KQ8IY84 436 aa20.31■□□□□ 0.84
IFT20-212ENST00000582797 RPGRQ92834 1020 aaKnown RBP20.31■□□□□ 0.84
IFT20-212ENST00000582797 ADARB2Q9NS39 739 aaKnown RBP20.31■□□□□ 0.84
IFT20-212ENST00000582797 GPRC5DQ9NZD1 345 aa20.31■□□□□ 0.84
IFT20-212ENST00000582797 ZIC5Q96T25 663 aa20.3■□□□□ 0.84
IFT20-212ENST00000582797 ZNF408Q9H9D4 720 aa20.3■□□□□ 0.84
IFT20-212ENST00000582797 HOXA10P31260 410 aaPredicted RBP20.29■□□□□ 0.84
IFT20-212ENST00000582797 PPEF1O14829 653 aaPredicted RBP20.28■□□□□ 0.84
IFT20-212ENST00000582797 PPIP5K2O43314 1243 aa20.28■□□□□ 0.84
IFT20-212ENST00000582797 PRKAR2BP31323 418 aa20.28■□□□□ 0.84
IFT20-212ENST00000582797 AOC3Q16853 763 aa20.28■□□□□ 0.84
IFT20-212ENST00000582797 MCM10Q7L590 875 aa20.28■□□□□ 0.84
IFT20-212ENST00000582797 HHIPL1Q96JK4 782 aa20.28■□□□□ 0.84
IFT20-212ENST00000582797 NYXQ9GZU5 481 aa20.28■□□□□ 0.84
IFT20-212ENST00000582797 NPC1L1Q9UHC9 1359 aa20.28■□□□□ 0.84
IFT20-212ENST00000582797 LAMB2P55268 1798 aa20.27■□□□□ 0.84
IFT20-212ENST00000582797 SOX10P56693 466 aa20.27■□□□□ 0.84
IFT20-212ENST00000582797 CNGB1Q14028 1251 aaPredicted RBP20.27■□□□□ 0.84
IFT20-212ENST00000582797 NGEFQ8N5V2 710 aa20.27■□□□□ 0.84
IFT20-212ENST00000582797 PER1O15534 1290 aaPredicted RBP20.26■□□□□ 0.83
IFT20-212ENST00000582797 GMPSP49915 693 aaPredicted RBP20.26■□□□□ 0.83
IFT20-212ENST00000582797 CXCL9Q07325 125 aa20.26■□□□□ 0.83
IFT20-212ENST00000582797 C3orf67Q6ZVT6 689 aa20.26■□□□□ 0.83
IFT20-212ENST00000582797 POLR2AP24928 1970 aaKnown RBP20.26■□□□□ 0.83
IFT20-212ENST00000582797 KIF7Q2M1P5 1343 aa20.26■□□□□ 0.83
IFT20-212ENST00000582797 UBN2Q6ZU65 1347 aa20.26■□□□□ 0.83
IFT20-212ENST00000582797 AKAP11Q9UKA4 1901 aa20.25■□□□□ 0.83
IFT20-212ENST00000582797 GPTP24298 496 aa20.25■□□□□ 0.83
IFT20-212ENST00000582797 GRIPAP1Q4V328 841 aa20.25■□□□□ 0.83
IFT20-212ENST00000582797 RSPH6AQ9H0K4 717 aa20.25■□□□□ 0.83
IFT20-212ENST00000582797 KDM3BQ7LBC6 1761 aa20.25■□□□□ 0.83
IFT20-212ENST00000582797 HIRAP54198 1017 aaPredicted RBP20.24■□□□□ 0.83
IFT20-212ENST00000582797 DCTN1Q14203 1278 aa20.24■□□□□ 0.83
IFT20-212ENST00000582797 RBM17Q96I25 401 aaKnown RBP20.24■□□□□ 0.83
IFT20-212ENST00000582797 CRAMP1Q96RY5 1269 aa20.24■□□□□ 0.83
IFT20-212ENST00000582797 PGAP2Q9UHJ9 254 aa20.24■□□□□ 0.83
IFT20-212ENST00000582797 NOGQ13253 232 aa20.23■□□□□ 0.83
IFT20-212ENST00000582797 DLK2Q6UY11 383 aa20.23■□□□□ 0.83
IFT20-212ENST00000582797 TRPM4Q8TD43 1214 aa20.23■□□□□ 0.83
IFT20-212ENST00000582797 ZNRF3Q9ULT6 936 aa20.23■□□□□ 0.83
IFT20-212ENST00000582797 IBTKQ9P2D0 1353 aaPredicted RBP20.22■□□□□ 0.83
IFT20-212ENST00000582797 TAF1P21675 1872 aa20.22■□□□□ 0.83
IFT20-212ENST00000582797 DLG5Q8TDM6 1919 aa20.22■□□□□ 0.83
IFT20-212ENST00000582797 SUSD4Q5VX71 490 aa20.22■□□□□ 0.83
IFT20-212ENST00000582797 TTLL7Q6ZT98 887 aa20.22■□□□□ 0.83
IFT20-212ENST00000582797 MAP3K15Q6ZN16 1313 aa20.22■□□□□ 0.83
IFT20-212ENST00000582797 SHTN1A0MZ66 631 aa20.21■□□□□ 0.83
IFT20-212ENST00000582797 HUNKP57058 714 aa20.21■□□□□ 0.83
IFT20-212ENST00000582797 RTF1Q92541 710 aaKnown RBP20.21■□□□□ 0.83
IFT20-212ENST00000582797 MIS18AQ9NYP9 233 aa20.21■□□□□ 0.83
IFT20-212ENST00000582797 ERVV-1B6SEH8 477 aa20.2■□□□□ 0.82
IFT20-212ENST00000582797 CDC37L1Q7L3B6 337 aa20.2■□□□□ 0.82
IFT20-212ENST00000582797 BCL2L13Q9BXK5 485 aa20.2■□□□□ 0.82
IFT20-212ENST00000582797 ZBTB3Q9H5J0 574 aa20.2■□□□□ 0.82
IFT20-212ENST00000582797 ANKRD36CQ5JPF3 1778 aa20.19■□□□□ 0.82
IFT20-212ENST00000582797 RAD17O75943 681 aa20.19■□□□□ 0.82
IFT20-212ENST00000582797 NTSR2O95665 410 aa20.19■□□□□ 0.82
IFT20-212ENST00000582797 USP48Q86UV5 1035 aa20.19■□□□□ 0.82
IFT20-212ENST00000582797 ZC3H15Q8WU90 426 aaKnown RBP20.19■□□□□ 0.82
IFT20-212ENST00000582797 ATP6V0A2Q9Y487 856 aa20.19■□□□□ 0.82
IFT20-212ENST00000582797 FAM155AB1AL88 458 aaPredicted RBP20.18■□□□□ 0.82
IFT20-212ENST00000582797 KIF6Q6ZMV9 814 aa20.18■□□□□ 0.82
IFT20-212ENST00000582797 RRP7AQ9Y3A4 280 aaKnown RBP20.18■□□□□ 0.82
IFT20-212ENST00000582797 CDHR2Q9BYE9 1310 aa20.18■□□□□ 0.82
IFT20-212ENST00000582797 RTFDC1Q9BY42 306 aaPredicted RBP20.17■□□□□ 0.82
IFT20-212ENST00000582797 VPS33BQ9H267 617 aa20.17■□□□□ 0.82
IFT20-212ENST00000582797 ABCC4O15439 1325 aa20.17■□□□□ 0.82
IFT20-212ENST00000582797 DUOX1Q9NRD9 1551 aa20.17■□□□□ 0.82
IFT20-212ENST00000582797 MYL6BP14649 208 aa20.16■□□□□ 0.82
IFT20-212ENST00000582797 PRPF38BQ5VTL8 546 aaKnown RBP20.16■□□□□ 0.82
IFT20-212ENST00000582797 ZNF34Q8IZ26 560 aa20.16■□□□□ 0.82
IFT20-212ENST00000582797 TMX4Q9H1E5 349 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms