RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 ZNF790Q6PG37 636 aa11.87□□□□□ -0.51
CDK5RAP3-224ENST00000582275 ZNF496Q96IT1 587 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-224ENST00000582275 FMNL2Q96PY5 1086 aa11.87□□□□□ -0.51
CDK5RAP3-224ENST00000582275 POLR3GLQ9BT43 218 aa11.87□□□□□ -0.51
CDK5RAP3-224ENST00000582275 GJA3Q9Y6H8 435 aa11.87□□□□□ -0.51
CDK5RAP3-224ENST00000582275 CASP8AP2Q9UKL3 1982 aa11.87□□□□□ -0.51
CDK5RAP3-224ENST00000582275 SAPCD2Q86UD0 394 aa11.86□□□□□ -0.51
CDK5RAP3-224ENST00000582275 LTBP1Q14766 1721 aa11.86□□□□□ -0.51
CDK5RAP3-224ENST00000582275 AOC2O75106 756 aa11.85□□□□□ -0.51
CDK5RAP3-224ENST00000582275 NOGQ13253 232 aa11.85□□□□□ -0.51
CDK5RAP3-224ENST00000582275 MTHFSDQ2M296 383 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-224ENST00000582275 TRAF5O00463 557 aa11.84□□□□□ -0.51
CDK5RAP3-224ENST00000582275 CELF2O95319 508 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-224ENST00000582275 A1BGP04217 495 aa11.84□□□□□ -0.51
CDK5RAP3-224ENST00000582275 EPS15P42566 896 aa11.84□□□□□ -0.51
CDK5RAP3-224ENST00000582275 SCNN1DP51172 638 aa11.84□□□□□ -0.51
CDK5RAP3-224ENST00000582275 LARGE2Q8N3Y3 721 aa11.84□□□□□ -0.51
CDK5RAP3-224ENST00000582275 PANK3Q9H999 370 aa11.84□□□□□ -0.51
CDK5RAP3-224ENST00000582275 ADARB2Q9NS39 739 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-224ENST00000582275 GTF2E1P29083 439 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-224ENST00000582275 NIM1KQ8IY84 436 aa11.83□□□□□ -0.52
CDK5RAP3-224ENST00000582275 BCORQ6W2J9 1755 aa11.82□□□□□ -0.52
CDK5RAP3-224ENST00000582275 HMOX1P09601 288 aa11.82□□□□□ -0.52
CDK5RAP3-224ENST00000582275 FMR1Q06787 632 aaKnown RBP eCLIP11.82□□□□□ -0.52
CDK5RAP3-224ENST00000582275 CIAPIN1Q6FI81 312 aa11.82□□□□□ -0.52
CDK5RAP3-224ENST00000582275 OLFM4Q6UX06 510 aa11.82□□□□□ -0.52
CDK5RAP3-224ENST00000582275 GAS2L2Q8NHY3 880 aa11.82□□□□□ -0.52
CDK5RAP3-224ENST00000582275 ZC3H15Q8WU90 426 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-224ENST00000582275 GCC1Q96CN9 775 aa11.82□□□□□ -0.52
CDK5RAP3-224ENST00000582275 TMX4Q9H1E5 349 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-224ENST00000582275 VPS33BQ9H267 617 aa11.82□□□□□ -0.52
CDK5RAP3-224ENST00000582275 SAGE1Q9NXZ1 904 aa11.82□□□□□ -0.52
CDK5RAP3-224ENST00000582275 NIP7Q9Y221 180 aaKnown RBP eCLIP11.82□□□□□ -0.52
CDK5RAP3-224ENST00000582275 GNAT3A8MTJ3 354 aa11.81□□□□□ -0.52
CDK5RAP3-224ENST00000582275 NYXQ9GZU5 481 aa11.81□□□□□ -0.52
CDK5RAP3-224ENST00000582275 GPRC5DQ9NZD1 345 aa11.81□□□□□ -0.52
CDK5RAP3-224ENST00000582275 KNSTRNQ9Y448 316 aa11.81□□□□□ -0.52
CDK5RAP3-224ENST00000582275 CDHR2Q9BYE9 1310 aa11.81□□□□□ -0.52
CDK5RAP3-224ENST00000582275 SNED1Q8TER0 1413 aa11.8□□□□□ -0.52
CDK5RAP3-224ENST00000582275 PITPNM1O00562 1244 aa11.8□□□□□ -0.52
CDK5RAP3-224ENST00000582275 SOX10P56693 466 aa11.8□□□□□ -0.52
CDK5RAP3-224ENST00000582275 CRY2Q49AN0 593 aa11.8□□□□□ -0.52
CDK5RAP3-224ENST00000582275 CDC37L1Q7L3B6 337 aa11.8□□□□□ -0.52
CDK5RAP3-224ENST00000582275 RPGRQ92834 1020 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-224ENST00000582275 PGAP2Q9UHJ9 254 aa11.8□□□□□ -0.52
CDK5RAP3-224ENST00000582275 DIAPH1O60610 1272 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-224ENST00000582275 IL17REQ8NFR9 667 aa11.79□□□□□ -0.52
CDK5RAP3-224ENST00000582275 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-224ENST00000582275 BTBD11A6QL63 1104 aa11.78□□□□□ -0.52
CDK5RAP3-224ENST00000582275 SNRPA1P09661 255 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-224ENST00000582275 NBPF15Q8N660 670 aa11.78□□□□□ -0.52
CDK5RAP3-224ENST00000582275 SUPT20HQ8NEM7 779 aa11.78□□□□□ -0.52
CDK5RAP3-224ENST00000582275 CCDC102AQ96A19 550 aa11.78□□□□□ -0.52
CDK5RAP3-224ENST00000582275 GLIS2Q9BZE0 524 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-224ENST00000582275 ZNF408Q9H9D4 720 aa11.78□□□□□ -0.52
CDK5RAP3-224ENST00000582275 TIMELESSQ9UNS1 1208 aa11.78□□□□□ -0.52
CDK5RAP3-224ENST00000582275 KIF7Q2M1P5 1343 aa11.78□□□□□ -0.52
CDK5RAP3-224ENST00000582275 PPIP5K2O43314 1243 aa11.77□□□□□ -0.53
CDK5RAP3-224ENST00000582275 HOXA10P31260 410 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-224ENST00000582275 HUNKP57058 714 aa11.77□□□□□ -0.53
CDK5RAP3-224ENST00000582275 RBM17Q96I25 401 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-224ENST00000582275 CRAMP1Q96RY5 1269 aa11.77□□□□□ -0.53
CDK5RAP3-224ENST00000582275 ZNRF3Q9ULT6 936 aa11.77□□□□□ -0.53
CDK5RAP3-224ENST00000582275 USP16Q9Y5T5 823 aa11.77□□□□□ -0.53
CDK5RAP3-224ENST00000582275 FAM177BA6PVY3 158 aa11.76□□□□□ -0.53
CDK5RAP3-224ENST00000582275 TNIP1Q15025 636 aa11.76□□□□□ -0.53
CDK5RAP3-224ENST00000582275 PKN2Q16513 984 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-224ENST00000582275 CTU1Q7Z7A3 348 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-224ENST00000582275 CEMIPQ8WUJ3 1361 aa11.76□□□□□ -0.53
CDK5RAP3-224ENST00000582275 NPC1L1Q9UHC9 1359 aa11.76□□□□□ -0.53
CDK5RAP3-224ENST00000582275 RIC1Q4ADV7 1423 aa11.76□□□□□ -0.53
CDK5RAP3-224ENST00000582275 COL4A5P29400 1685 aa11.75□□□□□ -0.53
CDK5RAP3-224ENST00000582275 PPEF1O14829 653 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-224ENST00000582275 RGMBQ6NW40 437 aa11.75□□□□□ -0.53
CDK5RAP3-224ENST00000582275 CHRDL2Q6WN34 429 aa11.75□□□□□ -0.53
CDK5RAP3-224ENST00000582275 BCL2L13Q9BXK5 485 aa11.75□□□□□ -0.53
CDK5RAP3-224ENST00000582275 IBTKQ9P2D0 1353 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-224ENST00000582275 SIPA1L3O60292 1781 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-224ENST00000582275 H7C1D1 291 aa11.74□□□□□ -0.53
CDK5RAP3-224ENST00000582275 GMPSP49915 693 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-224ENST00000582275 CXCL9Q07325 125 aa11.74□□□□□ -0.53
CDK5RAP3-224ENST00000582275 C2orf69Q8N8R5 385 aa11.74□□□□□ -0.53
CDK5RAP3-224ENST00000582275 TNRC18O15417 2968 aaPredicted RBP11.73□□□□□ -0.53
CDK5RAP3-224ENST00000582275 ERVV-1B6SEH8 477 aa11.73□□□□□ -0.53
CDK5RAP3-224ENST00000582275 PIP4K2AP48426 406 aaPredicted RBP11.73□□□□□ -0.53
CDK5RAP3-224ENST00000582275 EIF4G2P78344 907 aaKnown RBP eCLIP11.73□□□□□ -0.53
CDK5RAP3-224ENST00000582275 AOC3Q16853 763 aa11.73□□□□□ -0.53
CDK5RAP3-224ENST00000582275 RNF186Q9NXI6 227 aa11.73□□□□□ -0.53
CDK5RAP3-224ENST00000582275 ABCC12Q96J65 1359 aa11.72□□□□□ -0.53
CDK5RAP3-224ENST00000582275 FAM155AB1AL88 458 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-224ENST00000582275 KCNQ3O43525 872 aa11.72□□□□□ -0.53
CDK5RAP3-224ENST00000582275 TRPA1O75762 1119 aa11.72□□□□□ -0.53
CDK5RAP3-224ENST00000582275 KIF23Q02241 960 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-224ENST00000582275 AMER1Q5JTC6 1135 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-224ENST00000582275 NUTM1Q86Y26 1132 aa11.72□□□□□ -0.53
CDK5RAP3-224ENST00000582275 ZIC5Q96T25 663 aa11.72□□□□□ -0.53
CDK5RAP3-224ENST00000582275 RTFDC1Q9BY42 306 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-224ENST00000582275 GBA2Q9HCG7 927 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-224ENST00000582275 ATP6V0A2Q9Y487 856 aa11.72□□□□□ -0.53
CDK5RAP3-224ENST00000582275 AKAP11Q9UKA4 1901 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms