RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 POTEAQ6S8J7 498 aa27.69■■■□□ 2.02
CCDC47-204ENST00000582252 NUTM1Q86Y26 1132 aa27.69■■■□□ 2.02
CCDC47-204ENST00000582252 RILPL2Q969X0 211 aa27.69■■■□□ 2.02
CCDC47-204ENST00000582252 SLKQ9H2G2 1235 aaPredicted RBP27.69■■■□□ 2.02
CCDC47-204ENST00000582252 LY75O60449 1722 aa27.68■■■□□ 2.02
CCDC47-204ENST00000582252 COL5A3P25940 1745 aaPredicted RBP27.68■■■□□ 2.02
CCDC47-204ENST00000582252 G3BP1Q13283 466 aaKnown RBP eCLIP27.67■■■□□ 2.02
CCDC47-204ENST00000582252 TSHZ3Q63HK5 1081 aa27.67■■■□□ 2.02
CCDC47-204ENST00000582252 BCL11BQ9C0K0 894 aaPredicted RBP27.67■■■□□ 2.02
CCDC47-204ENST00000582252 KAZALD1Q96I82 304 aa27.67■■■□□ 2.02
CCDC47-204ENST00000582252 ANTXR1Q9H6X2 564 aa27.67■■■□□ 2.02
CCDC47-204ENST00000582252 NBPF26B4DH59 902 aa27.66■■■□□ 2.02
CCDC47-204ENST00000582252 A1BGP04217 495 aa27.66■■■□□ 2.02
CCDC47-204ENST00000582252 ATP6V1AP38606 617 aa27.66■■■□□ 2.02
CCDC47-204ENST00000582252 PIP4K2AP48426 406 aaPredicted RBP27.66■■■□□ 2.02
CCDC47-204ENST00000582252 NBPF14Q5TI25 921 aa27.66■■■□□ 2.02
CCDC47-204ENST00000582252 NBPF10Q6P3W6 841 aaKnown RBP27.66■■■□□ 2.02
CCDC47-204ENST00000582252 PTF1AQ7RTS3 328 aa27.66■■■□□ 2.02
CCDC47-204ENST00000582252 NBPF15Q8N660 670 aa27.66■■■□□ 2.02
CCDC47-204ENST00000582252 CYP19A1P11511 503 aaPredicted RBP27.65■■■□□ 2.02
CCDC47-204ENST00000582252 CNTROBQ8N137 903 aa27.64■■■□□ 2.02
CCDC47-204ENST00000582252 ESYT1Q9BSJ8 1104 aa27.64■■■□□ 2.02
CCDC47-204ENST00000582252 RREB1Q92766 1687 aa27.64■■■□□ 2.02
CCDC47-204ENST00000582252 GLRX3O76003 335 aaKnown RBP27.64■■■□□ 2.01
CCDC47-204ENST00000582252 PI4K2BQ8TCG2 481 aa27.64■■■□□ 2.01
CCDC47-204ENST00000582252 EPB41L2O43491 1005 aaKnown RBP27.63■■■□□ 2.01
CCDC47-204ENST00000582252 IFIT2P09913 472 aaKnown RBP27.63■■■□□ 2.01
CCDC47-204ENST00000582252 MCCP23508 829 aa27.63■■■□□ 2.01
CCDC47-204ENST00000582252 CHMLP26374 656 aa27.63■■■□□ 2.01
CCDC47-204ENST00000582252 MYH14Q7Z406 1995 aaKnown RBP27.63■■■□□ 2.01
CCDC47-204ENST00000582252 PA2G4Q9UQ80 394 aaKnown RBP27.62■■■□□ 2.01
CCDC47-204ENST00000582252 CHMP5Q9NZZ3 219 aa27.61■■■□□ 2.01
CCDC47-204ENST00000582252 A0A087WZG4 1122 aa27.61■■■□□ 2.01
CCDC47-204ENST00000582252 TAF1LQ8IZX4 1826 aa27.61■■■□□ 2.01
CCDC47-204ENST00000582252 K7ELQ4 463 aaPredicted RBP27.6■■■□□ 2.01
CCDC47-204ENST00000582252 RABL6Q3YEC7 729 aaPredicted RBP27.59■■■□□ 2.01
CCDC47-204ENST00000582252 UBE3BQ7Z3V4 1068 aa27.59■■■□□ 2.01
CCDC47-204ENST00000582252 ECHDC1Q9NTX5 307 aa27.59■■■□□ 2.01
CCDC47-204ENST00000582252 CWC25Q9NXE8 425 aaPredicted RBP27.59■■■□□ 2.01
CCDC47-204ENST00000582252 ITPK1Q13572 414 aa27.58■■■□□ 2.01
CCDC47-204ENST00000582252 ATP5J2-PTCD1G3V325 749 aa27.58■■■□□ 2.01
CCDC47-204ENST00000582252 COPRSQ9NQ92 184 aa27.58■■■□□ 2.01
CCDC47-204ENST00000582252 TTLL7Q6ZT98 887 aa27.57■■■□□ 2
CCDC47-204ENST00000582252 CCDC191Q8NCU4 936 aa27.57■■■□□ 2
CCDC47-204ENST00000582252 ZBTB1Q9Y2K1 713 aa27.57■■■□□ 2
CCDC47-204ENST00000582252 TRIM37O94972 964 aa27.56■■■□□ 2
CCDC47-204ENST00000582252 AACSQ86V21 672 aa27.56■■■□□ 2
CCDC47-204ENST00000582252 SPRYD3Q8NCJ5 442 aa27.56■■■□□ 2
CCDC47-204ENST00000582252 CCDC87Q9NVE4 849 aa27.56■■■□□ 2
CCDC47-204ENST00000582252 ST18O60284 1047 aa27.55■■■□□ 2
CCDC47-204ENST00000582252 HSP90AA1P07900 732 aaKnown RBP27.55■■■□□ 2
CCDC47-204ENST00000582252 IL6STP40189 918 aaPredicted RBP27.55■■■□□ 2
CCDC47-204ENST00000582252 ILDR1Q86SU0 546 aaPredicted RBP27.55■■■□□ 2
CCDC47-204ENST00000582252 H7C1W4 665 aa27.55■■■□□ 2
CCDC47-204ENST00000582252 SASH1O94885 1247 aa27.55■■■□□ 2
CCDC47-204ENST00000582252 CRKLP46109 303 aaKnown RBP27.55■■■□□ 2
CCDC47-204ENST00000582252 EPHA10Q5JZY3 1008 aa27.55■■■□□ 2
CCDC47-204ENST00000582252 IL27Q8NEV9 243 aa27.55■■■□□ 2
CCDC47-204ENST00000582252 CIZ1Q9ULV3 898 aaPredicted RBP27.55■■■□□ 2
CCDC47-204ENST00000582252 CASP7P55210 303 aa27.54■■■□□ 2
CCDC47-204ENST00000582252 CCNL1Q9UK58 526 aaPredicted RBP27.54■■■□□ 2
CCDC47-204ENST00000582252 ANAPC15P60006 121 aa27.53■■■□□ 2
CCDC47-204ENST00000582252 INTS5Q6P9B9 1019 aaKnown RBP27.53■■■□□ 2
CCDC47-204ENST00000582252 KIF6Q6ZMV9 814 aa27.53■■■□□ 2
CCDC47-204ENST00000582252 ANO2Q9NQ90 1003 aa27.53■■■□□ 2
CCDC47-204ENST00000582252 ZNF330Q9Y3S2 320 aaPredicted RBP27.53■■■□□ 2
CCDC47-204ENST00000582252 RUFY2Q8WXA3 655 aa27.52■■■□□ 2
CCDC47-204ENST00000582252 SIL1Q9H173 461 aa27.52■■■□□ 2
CCDC47-204ENST00000582252 ZBTB3Q9H5J0 574 aa27.52■■■□□ 2
CCDC47-204ENST00000582252 CNTNAP4Q9C0A0 1308 aa27.51■■□□□ 1.99
CCDC47-204ENST00000582252 FRAT2O75474 233 aaPredicted RBP27.51■■□□□ 1.99
CCDC47-204ENST00000582252 RFX5P48382 616 aaPredicted RBP27.5■■□□□ 1.99
CCDC47-204ENST00000582252 LINC00116Q8NCU8 138 aa27.5■■□□□ 1.99
CCDC47-204ENST00000582252 TNS1Q9HBL0 1735 aaKnown RBP27.5■■□□□ 1.99
CCDC47-204ENST00000582252 EVI5LQ96CN4 794 aa27.5■■□□□ 1.99
CCDC47-204ENST00000582252 NUP98P52948 1817 aa27.49■■□□□ 1.99
CCDC47-204ENST00000582252 MAP4K4O95819 1239 aaPredicted RBP27.49■■□□□ 1.99
CCDC47-204ENST00000582252 EIF5P55010 431 aaKnown RBP27.49■■□□□ 1.99
CCDC47-204ENST00000582252 PTPN12Q05209 780 aaKnown RBP27.49■■□□□ 1.99
CCDC47-204ENST00000582252 HIP1O00291 1037 aa27.48■■□□□ 1.99
CCDC47-204ENST00000582252 RC3H1Q5TC82 1133 aaKnown RBP27.48■■□□□ 1.99
CCDC47-204ENST00000582252 EAF2Q96CJ1 260 aaPredicted RBP27.48■■□□□ 1.99
CCDC47-204ENST00000582252 ANKRD36CQ5JPF3 1778 aa27.48■■□□□ 1.99
CCDC47-204ENST00000582252 C4BP0C0L5 1744 aa27.47■■□□□ 1.99
CCDC47-204ENST00000582252 CD2BP2O95400 341 aaKnown RBP27.47■■□□□ 1.99
CCDC47-204ENST00000582252 TCIRG1Q13488 830 aa27.47■■□□□ 1.99
CCDC47-204ENST00000582252 ISCA1Q9BUE6 129 aa27.47■■□□□ 1.99
CCDC47-204ENST00000582252 DIAPH3Q9NSV4 1193 aa27.47■■□□□ 1.99
CCDC47-204ENST00000582252 RGPD3A6NKT7 1758 aaPredicted RBP27.47■■□□□ 1.99
CCDC47-204ENST00000582252 RGPD4Q7Z3J3 1758 aa27.47■■□□□ 1.99
CCDC47-204ENST00000582252 MAP3K15Q6ZN16 1313 aa27.47■■□□□ 1.99
CCDC47-204ENST00000582252 SGSM2O43147 1006 aa27.47■■□□□ 1.99
CCDC47-204ENST00000582252 DDIT3P35638 169 aa27.47■■□□□ 1.99
CCDC47-204ENST00000582252 TRIM28Q13263 835 aaKnown RBP27.47■■□□□ 1.99
CCDC47-204ENST00000582252 SLC27A3Q5K4L6 730 aa27.47■■□□□ 1.99
CCDC47-204ENST00000582252 LMBR1LQ6UX01 489 aa27.47■■□□□ 1.99
CCDC47-204ENST00000582252 JARID2Q92833 1246 aaPredicted RBP27.47■■□□□ 1.99
CCDC47-204ENST00000582252 HMGB2P26583 209 aaKnown RBP27.46■■□□□ 1.99
CCDC47-204ENST00000582252 MCM2P49736 904 aa27.46■■□□□ 1.99
CCDC47-204ENST00000582252 KCNQ4P56696 695 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms