RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 NUDT8Q8WV74 236 aa10.4□□□□□ -0.74
SMCHD1-207ENST00000581711 IGFLR1Q9H665 355 aa10.4□□□□□ -0.74
SMCHD1-207ENST00000581711 ATP1A2P50993 1020 aa10.39□□□□□ -0.75
SMCHD1-207ENST00000581711 CLDN10P78369 228 aa10.39□□□□□ -0.75
SMCHD1-207ENST00000581711 TP53INP1Q96A56 240 aa10.39□□□□□ -0.75
SMCHD1-207ENST00000581711 HYAL3O43820 417 aaPredicted RBP10.38□□□□□ -0.75
SMCHD1-207ENST00000581711 AFF1P51825 1210 aaKnown RBP10.38□□□□□ -0.75
SMCHD1-207ENST00000581711 BTLAQ7Z6A9 289 aa10.37□□□□□ -0.75
SMCHD1-207ENST00000581711 PLEKHM2Q8IWE5 1019 aa10.37□□□□□ -0.75
SMCHD1-207ENST00000581711 FMR1NBQ8N0W7 255 aaPredicted RBP10.37□□□□□ -0.75
SMCHD1-207ENST00000581711 NAGPAQ9UK23 515 aa10.37□□□□□ -0.75
SMCHD1-207ENST00000581711 USP21Q9UK80 565 aa10.37□□□□□ -0.75
SMCHD1-207ENST00000581711 USP17L3A6NCW0 530 aa10.36□□□□□ -0.75
SMCHD1-207ENST00000581711 USP17L4A6NCW7 530 aa10.36□□□□□ -0.75
SMCHD1-207ENST00000581711 M0R2N6 131 aa10.36□□□□□ -0.75
SMCHD1-207ENST00000581711 PRKCSHP14314 528 aaPredicted RBP10.36□□□□□ -0.75
SMCHD1-207ENST00000581711 TPRNQ4KMQ1 711 aa10.36□□□□□ -0.75
SMCHD1-207ENST00000581711 PSAPL1Q6NUJ1 521 aa10.36□□□□□ -0.75
SMCHD1-207ENST00000581711 USP17L2Q6R6M4 530 aa10.36□□□□□ -0.75
SMCHD1-207ENST00000581711 USP17L1Q7RTZ2 530 aa10.36□□□□□ -0.75
SMCHD1-207ENST00000581711 SSBP4Q9BWG4 385 aaPredicted RBP10.36□□□□□ -0.75
SMCHD1-207ENST00000581711 EFCC1Q9HA90 598 aa10.36□□□□□ -0.75
SMCHD1-207ENST00000581711 DNAJB12Q9NXW2 375 aaKnown RBP10.36□□□□□ -0.75
SMCHD1-207ENST00000581711 PPP1R12BO60237 982 aaPredicted RBP10.35□□□□□ -0.75
SMCHD1-207ENST00000581711 WWC1Q8IX03 1113 aa10.35□□□□□ -0.75
SMCHD1-207ENST00000581711 DMRTC2Q8IXT2 367 aaPredicted RBP10.35□□□□□ -0.75
SMCHD1-207ENST00000581711 ALDH16A1Q8IZ83 802 aa10.35□□□□□ -0.75
SMCHD1-207ENST00000581711 TSEN2Q8NCE0 465 aaKnown RBP10.35□□□□□ -0.75
SMCHD1-207ENST00000581711 C21orf2O43822 256 aa10.34□□□□□ -0.75
SMCHD1-207ENST00000581711 ILDR2Q71H61 639 aa10.34□□□□□ -0.75
SMCHD1-207ENST00000581711 LARGE2Q8N3Y3 721 aa10.33□□□□□ -0.76
SMCHD1-207ENST00000581711 OGFOD1Q8N543 542 aa10.33□□□□□ -0.76
SMCHD1-207ENST00000581711 GSX2Q9BZM3 304 aa10.33□□□□□ -0.76
SMCHD1-207ENST00000581711 PALM3A6NDB9 673 aaPredicted RBP10.32□□□□□ -0.76
SMCHD1-207ENST00000581711 RGS9O75916 674 aaPredicted RBP10.32□□□□□ -0.76
SMCHD1-207ENST00000581711 HIF1AQ16665 826 aa10.32□□□□□ -0.76
SMCHD1-207ENST00000581711 SIX5Q8N196 739 aa10.32□□□□□ -0.76
SMCHD1-207ENST00000581711 ADAMTS19Q8TE59 1207 aa10.32□□□□□ -0.76
SMCHD1-207ENST00000581711 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.32□□□□□ -0.76
SMCHD1-207ENST00000581711 STAG2Q8N3U4 1231 aa10.31□□□□□ -0.76
SMCHD1-207ENST00000581711 POM121Q96HA1 1249 aa10.31□□□□□ -0.76
SMCHD1-207ENST00000581711 PNMA5Q96PV4 448 aa10.31□□□□□ -0.76
SMCHD1-207ENST00000581711 C2orf49Q9BVC5 232 aaPredicted RBP10.31□□□□□ -0.76
SMCHD1-207ENST00000581711 NFKB1P19838 968 aa10.3□□□□□ -0.76
SMCHD1-207ENST00000581711 ZNF594Q96JF6 807 aaPredicted RBP10.3□□□□□ -0.76
SMCHD1-207ENST00000581711 UCN2Q96RP3 112 aa10.3□□□□□ -0.76
SMCHD1-207ENST00000581711 POM121CA8CG34 1229 aa10.29□□□□□ -0.76
SMCHD1-207ENST00000581711 CCINQ13939 588 aa10.29□□□□□ -0.76
SMCHD1-207ENST00000581711 IER5Q5VY09 327 aa10.29□□□□□ -0.76
SMCHD1-207ENST00000581711 NGLY1Q96IV0 654 aa10.29□□□□□ -0.76
SMCHD1-207ENST00000581711 MKRN1Q9UHC7 482 aaKnown RBP10.29□□□□□ -0.76
SMCHD1-207ENST00000581711 ATAD2Q6PL18 1390 aa10.28□□□□□ -0.76
SMCHD1-207ENST00000581711 ATP9BO43861 1147 aa10.28□□□□□ -0.76
SMCHD1-207ENST00000581711 DKK1O94907 266 aa10.28□□□□□ -0.76
SMCHD1-207ENST00000581711 MSL1Q68DK7 614 aa10.28□□□□□ -0.76
SMCHD1-207ENST00000581711 FAM35AQ86V20 835 aa10.28□□□□□ -0.76
SMCHD1-207ENST00000581711 DTWD1Q8N5C7 304 aa10.28□□□□□ -0.76
SMCHD1-207ENST00000581711 FBXO11Q86XK2 927 aa10.27□□□□□ -0.77
SMCHD1-207ENST00000581711 WFDC12Q8WWY7 111 aa10.27□□□□□ -0.77
SMCHD1-207ENST00000581711 RBM19Q9Y4C8 960 aaKnown RBP10.27□□□□□ -0.77
SMCHD1-207ENST00000581711 IREB2P48200 963 aaKnown RBP10.26□□□□□ -0.77
SMCHD1-207ENST00000581711 CHMP7Q8WUX9 453 aaPredicted RBP10.26□□□□□ -0.77
SMCHD1-207ENST00000581711 SCG3Q8WXD2 468 aaKnown RBP10.26□□□□□ -0.77
SMCHD1-207ENST00000581711 RNF112Q9ULX5 631 aa10.26□□□□□ -0.77
SMCHD1-207ENST00000581711 TGFBR3LH3BV60 316 aa10.25□□□□□ -0.77
SMCHD1-207ENST00000581711 CPB1P15086 417 aa10.25□□□□□ -0.77
SMCHD1-207ENST00000581711 NOS3P29474 1203 aa10.25□□□□□ -0.77
SMCHD1-207ENST00000581711 RTN1Q16799 776 aa10.25□□□□□ -0.77
SMCHD1-207ENST00000581711 GAS2L2Q8NHY3 880 aa10.25□□□□□ -0.77
SMCHD1-207ENST00000581711 LPIN3Q9BQK8 851 aa10.25□□□□□ -0.77
SMCHD1-207ENST00000581711 BCS1LQ9Y276 419 aa10.25□□□□□ -0.77
SMCHD1-207ENST00000581711 GRIK5Q16478 980 aa10.24□□□□□ -0.77
SMCHD1-207ENST00000581711 PCSK7Q16549 785 aa10.24□□□□□ -0.77
SMCHD1-207ENST00000581711 KRTAP19-1Q8IUB9 90 aa10.24□□□□□ -0.77
SMCHD1-207ENST00000581711 FRRS1LQ9P0K9 344 aa10.24□□□□□ -0.77
SMCHD1-207ENST00000581711 DMGDHQ9UI17 866 aaKnown RBP10.24□□□□□ -0.77
SMCHD1-207ENST00000581711 MAP3K6O95382 1288 aa10.23□□□□□ -0.77
SMCHD1-207ENST00000581711 GRNP28799 593 aaKnown RBP10.23□□□□□ -0.77
SMCHD1-207ENST00000581711 HDGFL1Q5TGJ6 251 aa10.23□□□□□ -0.77
SMCHD1-207ENST00000581711 RAD21O60216 631 aa10.22□□□□□ -0.77
SMCHD1-207ENST00000581711 PLAURQ03405 335 aa10.22□□□□□ -0.77
SMCHD1-207ENST00000581711 PERM1Q5SV97 790 aa10.22□□□□□ -0.77
SMCHD1-207ENST00000581711 MEGF10Q96KG7 1140 aa10.22□□□□□ -0.77
SMCHD1-207ENST00000581711 EPB42P16452 691 aa10.21□□□□□ -0.77
SMCHD1-207ENST00000581711 IGF2-ASQ6U949 168 aa10.21□□□□□ -0.77
SMCHD1-207ENST00000581711 WFDC8Q8IUA0 241 aa10.21□□□□□ -0.77
SMCHD1-207ENST00000581711 ZFATQ9P243 1243 aa10.21□□□□□ -0.77
SMCHD1-207ENST00000581711 ZBTB42B2RXF5 422 aa10.2□□□□□ -0.78
SMCHD1-207ENST00000581711 SEC13P55735 322 aa10.2□□□□□ -0.78
SMCHD1-207ENST00000581711 ELMSAN1Q6PJG2 1045 aa10.2□□□□□ -0.78
SMCHD1-207ENST00000581711 DHX32Q7L7V1 743 aaKnown RBP10.2□□□□□ -0.78
SMCHD1-207ENST00000581711 TRPM4Q8TD43 1214 aa10.2□□□□□ -0.78
SMCHD1-207ENST00000581711 RASA1P20936 1047 aa10.19□□□□□ -0.78
SMCHD1-207ENST00000581711 INPP5BP32019 993 aa10.19□□□□□ -0.78
SMCHD1-207ENST00000581711 PRR23CQ6ZRP0 262 aa10.19□□□□□ -0.78
SMCHD1-207ENST00000581711 KRT25Q7Z3Z0 450 aa10.19□□□□□ -0.78
SMCHD1-207ENST00000581711 KRTAP9-9Q9BYP9 154 aa10.19□□□□□ -0.78
SMCHD1-207ENST00000581711 KRTAP9-4Q9BYQ2 154 aa10.19□□□□□ -0.78
SMCHD1-207ENST00000581711 GOLGA2P5Q9HBQ8 144 aa10.19□□□□□ -0.78
SMCHD1-207ENST00000581711 BTBD11A6QL63 1104 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms