RNA–Protein interactions for RNA: ENST00000581698.1

ATPAF2-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-211ENST00000581698 MIER1Q8N108 512 aa19.48■□□□□ 0.71
ATPAF2-211ENST00000581698 VAMP4O75379 141 aa19.47■□□□□ 0.71
ATPAF2-211ENST00000581698 EXOSC9Q06265 439 aaKnown RBP19.47■□□□□ 0.71
ATPAF2-211ENST00000581698 TWISTNBQ3B726 338 aaPredicted RBP19.47■□□□□ 0.71
ATPAF2-211ENST00000581698 STYK1Q6J9G0 422 aa19.47■□□□□ 0.71
ATPAF2-211ENST00000581698 HYPKQ9NX55 129 aa19.47■□□□□ 0.71
ATPAF2-211ENST00000581698 CCDC88AQ3V6T2 1871 aa19.47■□□□□ 0.71
ATPAF2-211ENST00000581698 TAF1P21675 1872 aa19.46■□□□□ 0.71
ATPAF2-211ENST00000581698 PRPF40BQ6NWY9 871 aaKnown RBP19.46■□□□□ 0.71
ATPAF2-211ENST00000581698 ANKRD13DQ6ZTN6 518 aa19.46■□□□□ 0.71
ATPAF2-211ENST00000581698 TIAM2Q8IVF5 1701 aa19.45■□□□□ 0.7
ATPAF2-211ENST00000581698 PARP10Q53GL7 1025 aa19.45■□□□□ 0.7
ATPAF2-211ENST00000581698 SLC10A5Q5PT55 438 aa19.45■□□□□ 0.7
ATPAF2-211ENST00000581698 ZNF622Q969S3 477 aaKnown RBP eCLIP19.45■□□□□ 0.7
ATPAF2-211ENST00000581698 MASTLQ96GX5 879 aa19.45■□□□□ 0.7
ATPAF2-211ENST00000581698 ATP5J2-PTCD1G3V325 749 aa19.44■□□□□ 0.7
ATPAF2-211ENST00000581698 C21orf2O43822 256 aa19.44■□□□□ 0.7
ATPAF2-211ENST00000581698 PDZRN3Q9UPQ7 1066 aa19.44■□□□□ 0.7
ATPAF2-211ENST00000581698 NPR1P16066 1061 aa19.43■□□□□ 0.7
ATPAF2-211ENST00000581698 NYXQ9GZU5 481 aa19.43■□□□□ 0.7
ATPAF2-211ENST00000581698 ZNF219Q9P2Y4 722 aaPredicted RBP19.43■□□□□ 0.7
ATPAF2-211ENST00000581698 COL4A5P29400 1685 aa19.43■□□□□ 0.7
ATPAF2-211ENST00000581698 HOXA10P31260 410 aaPredicted RBP19.42■□□□□ 0.7
ATPAF2-211ENST00000581698 CCDC30Q5VVM6 783 aa19.42■□□□□ 0.7
ATPAF2-211ENST00000581698 C9orf131Q5VYM1 1079 aa19.42■□□□□ 0.7
ATPAF2-211ENST00000581698 DIEXFQ68CQ4 756 aaKnown RBP19.42■□□□□ 0.7
ATPAF2-211ENST00000581698 UTP14AQ9BVJ6 771 aaKnown RBP19.42■□□□□ 0.7
ATPAF2-211ENST00000581698 DICER1Q9UPY3 1922 aaKnown RBP19.42■□□□□ 0.7
ATPAF2-211ENST00000581698 CACNA1FO60840 1977 aa19.41■□□□□ 0.7
ATPAF2-211ENST00000581698 HCLS1P14317 486 aaPredicted RBP19.41■□□□□ 0.7
ATPAF2-211ENST00000581698 TRIM28Q13263 835 aaKnown RBP19.41■□□□□ 0.7
ATPAF2-211ENST00000581698 CDCA7LQ96GN5 454 aa19.41■□□□□ 0.7
ATPAF2-211ENST00000581698 NPHP1O15259 732 aa19.4■□□□□ 0.7
ATPAF2-211ENST00000581698 IGKV5-2P06315 115 aa19.4■□□□□ 0.7
ATPAF2-211ENST00000581698 HSP90AB3PQ58FF7 597 aa19.4■□□□□ 0.7
ATPAF2-211ENST00000581698 PPP1R42Q7Z4L9 355 aa19.4■□□□□ 0.7
ATPAF2-211ENST00000581698 CNKSR1Q969H4 720 aa19.4■□□□□ 0.7
ATPAF2-211ENST00000581698 LRRC37AA6NMS7 1700 aa19.39■□□□□ 0.7
ATPAF2-211ENST00000581698 TRMT2AQ8IZ69 625 aaKnown RBP19.39■□□□□ 0.69
ATPAF2-211ENST00000581698 RNF123Q5XPI4 1314 aa19.39■□□□□ 0.69
ATPAF2-211ENST00000581698 GOLGA2Q08379 1002 aa19.38■□□□□ 0.69
ATPAF2-211ENST00000581698 FAM89AQ96GI7 184 aa19.38■□□□□ 0.69
ATPAF2-211ENST00000581698 MYD88Q99836 296 aa19.38■□□□□ 0.69
ATPAF2-211ENST00000581698 METTL22Q9BUU2 404 aaPredicted RBP19.38■□□□□ 0.69
ATPAF2-211ENST00000581698 LTBP3Q9NS15 1303 aa19.38■□□□□ 0.69
ATPAF2-211ENST00000581698 DUOX1Q9NRD9 1551 aa19.37■□□□□ 0.69
ATPAF2-211ENST00000581698 SH3TC1Q8TE82 1336 aa19.37■□□□□ 0.69
ATPAF2-211ENST00000581698 PI4KAP2A4QPH2 592 aa19.37■□□□□ 0.69
ATPAF2-211ENST00000581698 SLC4A2P04920 1241 aa19.37■□□□□ 0.69
ATPAF2-211ENST00000581698 SLFN5Q08AF3 891 aa19.37■□□□□ 0.69
ATPAF2-211ENST00000581698 PI4KAP1Q8N8J0 262 aa19.37■□□□□ 0.69
ATPAF2-211ENST00000581698 RNF181Q9P0P0 153 aa19.37■□□□□ 0.69
ATPAF2-211ENST00000581698 TRMT112Q9UI30 125 aaKnown RBP19.37■□□□□ 0.69
ATPAF2-211ENST00000581698 MAP3K2Q9Y2U5 619 aa19.37■□□□□ 0.69
ATPAF2-211ENST00000581698 ABCC4O15439 1325 aa19.36■□□□□ 0.69
ATPAF2-211ENST00000581698 GTF2E1P29083 439 aaPredicted RBP19.36■□□□□ 0.69
ATPAF2-211ENST00000581698 FLIIQ13045 1269 aa19.36■□□□□ 0.69
ATPAF2-211ENST00000581698 KSR2Q6VAB6 950 aa19.36■□□□□ 0.69
ATPAF2-211ENST00000581698 RIC3Q7Z5B4 369 aa19.36■□□□□ 0.69
ATPAF2-211ENST00000581698 JARID2Q92833 1246 aaPredicted RBP19.36■□□□□ 0.69
ATPAF2-211ENST00000581698 LTBP1Q14766 1721 aa19.36■□□□□ 0.69
ATPAF2-211ENST00000581698 ZNF526Q8TF50 670 aaPredicted RBP19.35■□□□□ 0.69
ATPAF2-211ENST00000581698 CRAMP1Q96RY5 1269 aa19.35■□□□□ 0.69
ATPAF2-211ENST00000581698 MYH16Q9H6N6 1097 aa19.35■□□□□ 0.69
ATPAF2-211ENST00000581698 KIF3CO14782 793 aa19.34■□□□□ 0.69
ATPAF2-211ENST00000581698 LMNB1P20700 586 aa19.34■□□□□ 0.69
ATPAF2-211ENST00000581698 RTL5Q5HYW3 569 aaPredicted RBP19.34■□□□□ 0.69
ATPAF2-211ENST00000581698 CWF19L2Q2TBE0 894 aaKnown RBP19.33■□□□□ 0.68
ATPAF2-211ENST00000581698 CASP7P55210 303 aa19.32■□□□□ 0.68
ATPAF2-211ENST00000581698 SF3B3Q15393 1217 aaKnown RBP19.32■□□□□ 0.68
ATPAF2-211ENST00000581698 CCDC191Q8NCU4 936 aa19.32■□□□□ 0.68
ATPAF2-211ENST00000581698 NLRP3Q96P20 1036 aa19.32■□□□□ 0.68
ATPAF2-211ENST00000581698 STK31Q9BXU1 1019 aa19.32■□□□□ 0.68
ATPAF2-211ENST00000581698 NMRK2Q9NPI5 230 aa19.32■□□□□ 0.68
ATPAF2-211ENST00000581698 NEURL1BA8MQ27 555 aa19.31■□□□□ 0.68
ATPAF2-211ENST00000581698 PCCAP05165 728 aaPredicted RBP19.31■□□□□ 0.68
ATPAF2-211ENST00000581698 CCDC93Q567U6 631 aa19.31■□□□□ 0.68
ATPAF2-211ENST00000581698 ZBTB38Q8NAP3 1195 aaPredicted RBP19.31■□□□□ 0.68
ATPAF2-211ENST00000581698 TAOK3Q9H2K8 898 aa19.31■□□□□ 0.68
ATPAF2-211ENST00000581698 E9PSI1 815 aa19.3■□□□□ 0.68
ATPAF2-211ENST00000581698 F6X3S4 739 aa19.3■□□□□ 0.68
ATPAF2-211ENST00000581698 IRS4O14654 1257 aaPredicted RBP19.3■□□□□ 0.68
ATPAF2-211ENST00000581698 ALDH1B1P30837 517 aa19.3■□□□□ 0.68
ATPAF2-211ENST00000581698 RPGRQ92834 1020 aaKnown RBP19.3■□□□□ 0.68
ATPAF2-211ENST00000581698 PPEF1O14829 653 aaPredicted RBP19.29■□□□□ 0.68
ATPAF2-211ENST00000581698 FKBP4Q02790 459 aaKnown RBP eCLIP19.29■□□□□ 0.68
ATPAF2-211ENST00000581698 CELF1Q92879 486 aaKnown RBP19.29■□□□□ 0.68
ATPAF2-211ENST00000581698 RBM17Q96I25 401 aaKnown RBP19.29■□□□□ 0.68
ATPAF2-211ENST00000581698 ZNF277Q9NRM2 450 aaPredicted RBP19.29■□□□□ 0.68
ATPAF2-211ENST00000581698 CWC25Q9NXE8 425 aaPredicted RBP19.29■□□□□ 0.68
ATPAF2-211ENST00000581698 MYH3P11055 1940 aa19.29■□□□□ 0.68
ATPAF2-211ENST00000581698 CEP350Q5VT06 3117 aa19.29■□□□□ 0.68
ATPAF2-211ENST00000581698 WDR90Q96KV7 1748 aa19.28■□□□□ 0.68
ATPAF2-211ENST00000581698 POTECB2RU33 542 aa19.28■□□□□ 0.68
ATPAF2-211ENST00000581698 DDX58O95786 925 aaKnown RBP19.28■□□□□ 0.68
ATPAF2-211ENST00000581698 MRPL50Q8N5N7 158 aaKnown RBP19.28■□□□□ 0.68
ATPAF2-211ENST00000581698 GPBP1L1Q9HC44 474 aaPredicted RBP19.28■□□□□ 0.68
ATPAF2-211ENST00000581698 CDHR2Q9BYE9 1310 aa19.27■□□□□ 0.68
ATPAF2-211ENST00000581698 H7C1W4 665 aa19.27■□□□□ 0.68
ATPAF2-211ENST00000581698 FKBP5Q13451 457 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms