RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ALDH16A1Q8IZ83 802 aa8.44□□□□□ -1.06
SMCHD1-206ENST00000581631 A0A0A0MRY4 1105 aa8.43□□□□□ -1.06
SMCHD1-206ENST00000581631 PPP1R12BO60237 982 aaPredicted RBP8.43□□□□□ -1.06
SMCHD1-206ENST00000581631 GRNP28799 593 aaKnown RBP8.43□□□□□ -1.06
SMCHD1-206ENST00000581631 MBTPS1Q14703 1052 aa8.43□□□□□ -1.06
SMCHD1-206ENST00000581631 BHMTQ93088 406 aa8.43□□□□□ -1.06
SMCHD1-206ENST00000581631 SLC6A14Q9UN76 642 aa8.43□□□□□ -1.06
SMCHD1-206ENST00000581631 CHMP3Q9Y3E7 222 aa8.43□□□□□ -1.06
SMCHD1-206ENST00000581631 LILRB5O75023 590 aa8.42□□□□□ -1.06
SMCHD1-206ENST00000581631 PRSS36Q5K4E3 855 aa8.42□□□□□ -1.06
SMCHD1-206ENST00000581631 IER5Q5VY09 327 aa8.42□□□□□ -1.06
SMCHD1-206ENST00000581631 GSX2Q9BZM3 304 aa8.42□□□□□ -1.06
SMCHD1-206ENST00000581631 EFCC1Q9HA90 598 aa8.42□□□□□ -1.06
SMCHD1-206ENST00000581631 DMGDHQ9UI17 866 aaKnown RBP8.42□□□□□ -1.06
SMCHD1-206ENST00000581631 NAGPAQ9UK23 515 aa8.42□□□□□ -1.06
SMCHD1-206ENST00000581631 ATAD2Q6PL18 1390 aa8.42□□□□□ -1.06
SMCHD1-206ENST00000581631 C9orf172C9J069 976 aa8.41□□□□□ -1.06
SMCHD1-206ENST00000581631 RAD21O60216 631 aa8.41□□□□□ -1.06
SMCHD1-206ENST00000581631 ELNP15502 786 aa8.41□□□□□ -1.06
SMCHD1-206ENST00000581631 GAS2L2Q8NHY3 880 aa8.41□□□□□ -1.06
SMCHD1-206ENST00000581631 ZNF594Q96JF6 807 aaPredicted RBP8.41□□□□□ -1.06
SMCHD1-206ENST00000581631 BCS1LQ9Y276 419 aa8.41□□□□□ -1.06
SMCHD1-206ENST00000581631 H2AFB1P0C5Y9 115 aa8.4□□□□□ -1.06
SMCHD1-206ENST00000581631 H2AFB2P0C5Z0 115 aa8.4□□□□□ -1.06
SMCHD1-206ENST00000581631 LENG1Q96BZ8 264 aaPredicted RBP8.4□□□□□ -1.06
SMCHD1-206ENST00000581631 SSBP4Q9BWG4 385 aaPredicted RBP8.4□□□□□ -1.06
SMCHD1-206ENST00000581631 UBE2OQ9C0C9 1292 aaKnown RBP8.4□□□□□ -1.06
SMCHD1-206ENST00000581631 UBTFP17480 764 aaKnown RBP8.39□□□□□ -1.07
SMCHD1-206ENST00000581631 AFF1P51825 1210 aaKnown RBP8.39□□□□□ -1.07
SMCHD1-206ENST00000581631 FLIIQ13045 1269 aa8.39□□□□□ -1.07
SMCHD1-206ENST00000581631 TRAPPC3LQ5T215 181 aa8.39□□□□□ -1.07
SMCHD1-206ENST00000581631 ARTNQ5T4W7 220 aa8.39□□□□□ -1.07
SMCHD1-206ENST00000581631 TGFBR3LH3BV60 316 aa8.38□□□□□ -1.07
SMCHD1-206ENST00000581631 HIF1AQ16665 826 aa8.38□□□□□ -1.07
SMCHD1-206ENST00000581631 SHISA2Q6UWI4 295 aa8.38□□□□□ -1.07
SMCHD1-206ENST00000581631 TXNRD3Q86VQ6 643 aa8.38□□□□□ -1.07
SMCHD1-206ENST00000581631 SCG3Q8WXD2 468 aaKnown RBP8.38□□□□□ -1.07
SMCHD1-206ENST00000581631 JPH1Q9HDC5 661 aaPredicted RBP8.38□□□□□ -1.07
SMCHD1-206ENST00000581631 DNAJB12Q9NXW2 375 aaKnown RBP8.38□□□□□ -1.07
SMCHD1-206ENST00000581631 GRIK5Q16478 980 aa8.37□□□□□ -1.07
SMCHD1-206ENST00000581631 RTN1Q16799 776 aa8.37□□□□□ -1.07
SMCHD1-206ENST00000581631 FMR1NBQ8N0W7 255 aaPredicted RBP8.37□□□□□ -1.07
SMCHD1-206ENST00000581631 FNBP4Q8N3X1 1017 aaPredicted RBP8.37□□□□□ -1.07
SMCHD1-206ENST00000581631 MAFBQ9Y5Q3 323 aaPredicted RBP8.37□□□□□ -1.07
SMCHD1-206ENST00000581631 SEC13P55735 322 aa8.36□□□□□ -1.07
SMCHD1-206ENST00000581631 PSAPL1Q6NUJ1 521 aa8.36□□□□□ -1.07
SMCHD1-206ENST00000581631 NUDT8Q8WV74 236 aa8.36□□□□□ -1.07
SMCHD1-206ENST00000581631 SCO2A0A1W2PP80 73 aa8.35□□□□□ -1.07
SMCHD1-206ENST00000581631 RASA1P20936 1047 aa8.35□□□□□ -1.07
SMCHD1-206ENST00000581631 TBC1D8BQ0IIM8 1120 aa8.35□□□□□ -1.07
SMCHD1-206ENST00000581631 CCINQ13939 588 aa8.35□□□□□ -1.07
SMCHD1-206ENST00000581631 NGLY1Q96IV0 654 aa8.35□□□□□ -1.07
SMCHD1-206ENST00000581631 ZFP64Q9NPA5 681 aa8.35□□□□□ -1.07
SMCHD1-206ENST00000581631 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.35□□□□□ -1.07
SMCHD1-206ENST00000581631 NFKB1P19838 968 aa8.34□□□□□ -1.07
SMCHD1-206ENST00000581631 RAC1P63000 192 aa8.34□□□□□ -1.07
SMCHD1-206ENST00000581631 NRG1Q02297 640 aaPredicted RBP8.34□□□□□ -1.07
SMCHD1-206ENST00000581631 PTK7Q13308 1070 aa8.34□□□□□ -1.07
SMCHD1-206ENST00000581631 LPIN3Q9BQK8 851 aa8.34□□□□□ -1.07
SMCHD1-206ENST00000581631 TFIP11Q9UBB9 837 aaKnown RBP8.34□□□□□ -1.07
SMCHD1-206ENST00000581631 ZBTB42B2RXF5 422 aa8.33□□□□□ -1.08
SMCHD1-206ENST00000581631 IGFBP4P22692 258 aa8.33□□□□□ -1.08
SMCHD1-206ENST00000581631 INPP5BP32019 993 aa8.33□□□□□ -1.08
SMCHD1-206ENST00000581631 CRTC2Q53ET0 693 aaPredicted RBP8.33□□□□□ -1.08
SMCHD1-206ENST00000581631 KANK4Q5T7N3 995 aaPredicted RBP8.33□□□□□ -1.08
SMCHD1-206ENST00000581631 GLMNQ92990 594 aa8.33□□□□□ -1.08
SMCHD1-206ENST00000581631 ZFATQ9P243 1243 aa8.33□□□□□ -1.08
SMCHD1-206ENST00000581631 MAP3K6O95382 1288 aa8.32□□□□□ -1.08
SMCHD1-206ENST00000581631 PLAURQ03405 335 aa8.32□□□□□ -1.08
SMCHD1-206ENST00000581631 DMRTC2Q8IXT2 367 aaPredicted RBP8.32□□□□□ -1.08
SMCHD1-206ENST00000581631 CHMP7Q8WUX9 453 aaPredicted RBP8.32□□□□□ -1.08
SMCHD1-206ENST00000581631 IGFLR1Q9H665 355 aa8.32□□□□□ -1.08
SMCHD1-206ENST00000581631 FRRS1LQ9P0K9 344 aa8.32□□□□□ -1.08
SMCHD1-206ENST00000581631 MSL1Q68DK7 614 aa8.31□□□□□ -1.08
SMCHD1-206ENST00000581631 DTWD1Q8N5C7 304 aa8.31□□□□□ -1.08
SMCHD1-206ENST00000581631 TRPM4Q8TD43 1214 aa8.31□□□□□ -1.08
SMCHD1-206ENST00000581631 KRTAP4-12Q9BQ66 201 aa8.31□□□□□ -1.08
SMCHD1-206ENST00000581631 RBM19Q9Y4C8 960 aaKnown RBP8.31□□□□□ -1.08
SMCHD1-206ENST00000581631 RGS9O75916 674 aaPredicted RBP8.3□□□□□ -1.08
SMCHD1-206ENST00000581631 PRKCSHP14314 528 aaPredicted RBP8.3□□□□□ -1.08
SMCHD1-206ENST00000581631 DPYDQ12882 1025 aa8.3□□□□□ -1.08
SMCHD1-206ENST00000581631 LRP8Q14114 963 aa8.3□□□□□ -1.08
SMCHD1-206ENST00000581631 TTC9Q92623 222 aa8.3□□□□□ -1.08
SMCHD1-206ENST00000581631 PNMA5Q96PV4 448 aa8.3□□□□□ -1.08
SMCHD1-206ENST00000581631 QTRT2Q9H974 415 aaKnown RBP8.3□□□□□ -1.08
SMCHD1-206ENST00000581631 C11orf16Q9NQ32 467 aa8.3□□□□□ -1.08
SMCHD1-206ENST00000581631 LGR5O75473 907 aa8.29□□□□□ -1.08
SMCHD1-206ENST00000581631 IDH3AP50213 366 aa8.29□□□□□ -1.08
SMCHD1-206ENST00000581631 PERM1Q5SV97 790 aa8.29□□□□□ -1.08
SMCHD1-206ENST00000581631 FBXO11Q86XK2 927 aa8.29□□□□□ -1.08
SMCHD1-206ENST00000581631 TP53INP1Q96A56 240 aa8.29□□□□□ -1.08
SMCHD1-206ENST00000581631 CLUAP1Q96AJ1 413 aa8.29□□□□□ -1.08
SMCHD1-206ENST00000581631 IFT43Q96FT9 208 aa8.29□□□□□ -1.08
SMCHD1-206ENST00000581631 ARXQ96QS3 562 aa8.29□□□□□ -1.08
SMCHD1-206ENST00000581631 KLK14Q9P0G3 267 aa8.29□□□□□ -1.08
SMCHD1-206ENST00000581631 FAM196BA6NMK8 535 aa8.28□□□□□ -1.08
SMCHD1-206ENST00000581631 USP17L15C9J2P7 530 aa8.28□□□□□ -1.08
SMCHD1-206ENST00000581631 USP17L10C9JJH3 530 aa8.28□□□□□ -1.08
SMCHD1-206ENST00000581631 USP17L13C9JLJ4 530 aa8.28□□□□□ -1.08
SMCHD1-206ENST00000581631 USP17L12C9JPN9 530 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms