RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 GLTPD2A6NH11 291 aa11.66□□□□□ -0.54
NUP85-217ENST00000581335 SNRPA1P09661 255 aaKnown RBP11.66□□□□□ -0.54
NUP85-217ENST00000581335 DCTN1Q14203 1278 aa11.66□□□□□ -0.54
NUP85-217ENST00000581335 DICER1Q9UPY3 1922 aaKnown RBP11.66□□□□□ -0.54
NUP85-217ENST00000581335 CACNA1SQ13698 1873 aa11.66□□□□□ -0.54
NUP85-217ENST00000581335 DLG5Q8TDM6 1919 aa11.65□□□□□ -0.54
NUP85-217ENST00000581335 NFKBIEO00221 500 aa11.65□□□□□ -0.54
NUP85-217ENST00000581335 NPHP1O15259 732 aa11.65□□□□□ -0.54
NUP85-217ENST00000581335 C21orf2O43822 256 aa11.65□□□□□ -0.54
NUP85-217ENST00000581335 PIP4K2AP48426 406 aaPredicted RBP11.65□□□□□ -0.54
NUP85-217ENST00000581335 BRPF1P55201 1214 aaPredicted RBP11.65□□□□□ -0.54
NUP85-217ENST00000581335 ST5P78524 1137 aa11.65□□□□□ -0.54
NUP85-217ENST00000581335 CLEC4GQ6UXB4 293 aa11.65□□□□□ -0.54
NUP85-217ENST00000581335 CNBD1Q8NA66 436 aa11.65□□□□□ -0.54
NUP85-217ENST00000581335 CRISPLD2Q9H0B8 497 aa11.65□□□□□ -0.54
NUP85-217ENST00000581335 ARIH1Q9Y4X5 557 aaPredicted RBP11.65□□□□□ -0.54
NUP85-217ENST00000581335 ARFGEF2Q9Y6D5 1785 aa11.64□□□□□ -0.55
NUP85-217ENST00000581335 VEGFAP15692 232 aaPredicted RBP11.64□□□□□ -0.55
NUP85-217ENST00000581335 TAF7Q15545 349 aaPredicted RBP11.64□□□□□ -0.55
NUP85-217ENST00000581335 STYK1Q6J9G0 422 aa11.64□□□□□ -0.55
NUP85-217ENST00000581335 CNKSR1Q969H4 720 aa11.64□□□□□ -0.55
NUP85-217ENST00000581335 SLX4Q8IY92 1834 aa11.64□□□□□ -0.55
NUP85-217ENST00000581335 NBPF26B4DH59 902 aa11.63□□□□□ -0.55
NUP85-217ENST00000581335 NEFMP07197 916 aa11.63□□□□□ -0.55
NUP85-217ENST00000581335 SRGNP10124 158 aa11.63□□□□□ -0.55
NUP85-217ENST00000581335 DPY19L2Q6NUT2 758 aa11.63□□□□□ -0.55
NUP85-217ENST00000581335 NBPF10Q6P3W6 841 aaKnown RBP11.63□□□□□ -0.55
NUP85-217ENST00000581335 CHRDL2Q6WN34 429 aa11.63□□□□□ -0.55
NUP85-217ENST00000581335 NBPF15Q8N660 670 aa11.63□□□□□ -0.55
NUP85-217ENST00000581335 SMC1BQ8NDV3 1235 aa11.63□□□□□ -0.55
NUP85-217ENST00000581335 MASTLQ96GX5 879 aa11.63□□□□□ -0.55
NUP85-217ENST00000581335 ZNF652Q9Y2D9 606 aa11.63□□□□□ -0.55
NUP85-217ENST00000581335 LAMB4A4D0S4 1761 aa11.62□□□□□ -0.55
NUP85-217ENST00000581335 HTRA3P83110 453 aa11.62□□□□□ -0.55
NUP85-217ENST00000581335 NBPF5PQ86XG9 351 aaPredicted RBP11.62□□□□□ -0.55
NUP85-217ENST00000581335 MIS18AQ9NYP9 233 aa11.62□□□□□ -0.55
NUP85-217ENST00000581335 KDM3BQ7LBC6 1761 aa11.62□□□□□ -0.55
NUP85-217ENST00000581335 LTBP3Q9NS15 1303 aa11.61□□□□□ -0.55
NUP85-217ENST00000581335 POTECB2RU33 542 aa11.61□□□□□ -0.55
NUP85-217ENST00000581335 ERFEQ4G0M1 354 aa11.61□□□□□ -0.55
NUP85-217ENST00000581335 SOGA3Q5TF21 947 aa11.61□□□□□ -0.55
NUP85-217ENST00000581335 PRPF40BQ6NWY9 871 aaKnown RBP11.61□□□□□ -0.55
NUP85-217ENST00000581335 TPTE2Q6XPS3 522 aa11.61□□□□□ -0.55
NUP85-217ENST00000581335 PNISRQ8TF01 805 aaKnown RBP11.61□□□□□ -0.55
NUP85-217ENST00000581335 PHF12Q96QT6 1004 aa11.61□□□□□ -0.55
NUP85-217ENST00000581335 PLEKHF1Q96S99 279 aa11.61□□□□□ -0.55
NUP85-217ENST00000581335 LARP6Q9BRS8 491 aaKnown RBP11.61□□□□□ -0.55
NUP85-217ENST00000581335 KLRG2A4D1S0 409 aaPredicted RBP11.6□□□□□ -0.55
NUP85-217ENST00000581335 PDE4AP27815 886 aa11.6□□□□□ -0.55
NUP85-217ENST00000581335 CAMK2BQ13554 666 aa11.6□□□□□ -0.55
NUP85-217ENST00000581335 HLFQ16534 295 aa11.6□□□□□ -0.55
NUP85-217ENST00000581335 KLRG1Q96E93 195 aa11.6□□□□□ -0.55
NUP85-217ENST00000581335 TAOK3Q9H2K8 898 aa11.6□□□□□ -0.55
NUP85-217ENST00000581335 PNNQ9H307 717 aaKnown RBP11.6□□□□□ -0.55
NUP85-217ENST00000581335 NIP7Q9Y221 180 aaKnown RBP eCLIP11.6□□□□□ -0.55
NUP85-217ENST00000581335 NUP98P52948 1817 aa11.6□□□□□ -0.55
NUP85-217ENST00000581335 NPR1P16066 1061 aa11.59□□□□□ -0.55
NUP85-217ENST00000581335 NFE2L2Q16236 605 aa11.59□□□□□ -0.55
NUP85-217ENST00000581335 C7orf43Q8WVR3 580 aa11.59□□□□□ -0.55
NUP85-217ENST00000581335 EIF4A1P60842 406 aaKnown RBP11.58□□□□□ -0.56
NUP85-217ENST00000581335 JMYQ8N9B5 988 aa11.58□□□□□ -0.56
NUP85-217ENST00000581335 FAM177BA6PVY3 158 aa11.57□□□□□ -0.56
NUP85-217ENST00000581335 ERVV-1B6SEH8 477 aa11.57□□□□□ -0.56
NUP85-217ENST00000581335 CCDC93Q567U6 631 aa11.57□□□□□ -0.56
NUP85-217ENST00000581335 NGEFQ8N5V2 710 aa11.57□□□□□ -0.56
NUP85-217ENST00000581335 DDNO94850 711 aaPredicted RBP11.56□□□□□ -0.56
NUP85-217ENST00000581335 CD44P16070 742 aaKnown RBP11.56□□□□□ -0.56
NUP85-217ENST00000581335 GTF2E1P29083 439 aaPredicted RBP11.56□□□□□ -0.56
NUP85-217ENST00000581335 ALDH1B1P30837 517 aa11.56□□□□□ -0.56
NUP85-217ENST00000581335 THUMPD2Q9BTF0 503 aaKnown RBP11.56□□□□□ -0.56
NUP85-217ENST00000581335 NYXQ9GZU5 481 aa11.56□□□□□ -0.56
NUP85-217ENST00000581335 TRPC6Q9Y210 931 aa11.56□□□□□ -0.56
NUP85-217ENST00000581335 RRP7AQ9Y3A4 280 aaKnown RBP11.56□□□□□ -0.56
NUP85-217ENST00000581335 MAP3K15Q6ZN16 1313 aa11.56□□□□□ -0.56
NUP85-217ENST00000581335 MAPK8IP3Q9UPT6 1336 aa11.56□□□□□ -0.56
NUP85-217ENST00000581335 ZMYND10O75800 440 aa11.55□□□□□ -0.56
NUP85-217ENST00000581335 FKBP4Q02790 459 aaKnown RBP eCLIP11.55□□□□□ -0.56
NUP85-217ENST00000581335 KIF6Q6ZMV9 814 aa11.55□□□□□ -0.56
NUP85-217ENST00000581335 TTLL7Q6ZT98 887 aa11.55□□□□□ -0.56
NUP85-217ENST00000581335 ERICH6Q7L0X2 663 aa11.55□□□□□ -0.56
NUP85-217ENST00000581335 RTKN2Q8IZC4 609 aa11.55□□□□□ -0.56
NUP85-217ENST00000581335 SCN4AP35499 1836 aa11.55□□□□□ -0.56
NUP85-217ENST00000581335 MYL6BP14649 208 aa11.54□□□□□ -0.56
NUP85-217ENST00000581335 SLC24A3Q9HC58 644 aa11.54□□□□□ -0.56
NUP85-217ENST00000581335 IQCA1LA6NCM1 817 aa11.53□□□□□ -0.56
NUP85-217ENST00000581335 RIPK4P57078 832 aa11.53□□□□□ -0.56
NUP85-217ENST00000581335 RALBP1Q15311 655 aa11.53□□□□□ -0.56
NUP85-217ENST00000581335 CRY2Q49AN0 593 aa11.53□□□□□ -0.56
NUP85-217ENST00000581335 OLFM4Q6UX06 510 aa11.53□□□□□ -0.56
NUP85-217ENST00000581335 NUTM1Q86Y26 1132 aa11.53□□□□□ -0.56
NUP85-217ENST00000581335 SYNE4Q8N205 404 aa11.53□□□□□ -0.56
NUP85-217ENST00000581335 DDX27Q96GQ7 796 aaKnown RBP11.53□□□□□ -0.56
NUP85-217ENST00000581335 TMEM106CQ9BVX2 250 aa11.53□□□□□ -0.56
NUP85-217ENST00000581335 ZBTB3Q9H5J0 574 aa11.53□□□□□ -0.56
NUP85-217ENST00000581335 ZNF277Q9NRM2 450 aaPredicted RBP11.53□□□□□ -0.56
NUP85-217ENST00000581335 TSPYL4Q9UJ04 414 aa11.53□□□□□ -0.56
NUP85-217ENST00000581335 ERBB4Q15303 1308 aa11.53□□□□□ -0.56
NUP85-217ENST00000581335 POTEIP0CG38 1075 aa11.52□□□□□ -0.57
NUP85-217ENST00000581335 POTEJP0CG39 1038 aa11.52□□□□□ -0.57
NUP85-217ENST00000581335 SUSD4Q5VX71 490 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms