RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 SKILP12757 684 aa16.69■□□□□ 0.26
CSNK1D-217ENST00000581241 IARSP41252 1262 aaKnown RBP16.69■□□□□ 0.26
CSNK1D-217ENST00000581241 PPM1EQ8WY54 764 aa16.69■□□□□ 0.26
CSNK1D-217ENST00000581241 SRRTQ9BXP5 876 aaKnown RBP16.69■□□□□ 0.26
CSNK1D-217ENST00000581241 EPRSP07814 1512 aaKnown RBP16.69■□□□□ 0.26
CSNK1D-217ENST00000581241 IL16Q14005 1332 aa16.69■□□□□ 0.26
CSNK1D-217ENST00000581241 ZFP91Q96JP5 570 aaPredicted RBP16.69■□□□□ 0.26
CSNK1D-217ENST00000581241 EHMT1Q9H9B1 1298 aa16.69■□□□□ 0.26
CSNK1D-217ENST00000581241 ZKSCAN5Q9Y2L8 839 aa16.69■□□□□ 0.26
CSNK1D-217ENST00000581241 ZSWIM4Q9H7M6 989 aa16.69■□□□□ 0.26
CSNK1D-217ENST00000581241 METAP2P50579 478 aaKnown RBP eCLIP16.69■□□□□ 0.263e-6■■□□□ 12.2
CSNK1D-217ENST00000581241 TTF1Q15361 905 aaPredicted RBP16.69■□□□□ 0.26
CSNK1D-217ENST00000581241 ANKRD18BA2A2Z9 1011 aa16.68■□□□□ 0.26
CSNK1D-217ENST00000581241 ZNF444Q8N0Y2 327 aaPredicted RBP16.68■□□□□ 0.26
CSNK1D-217ENST00000581241 OPA1O60313 960 aa16.68■□□□□ 0.26
CSNK1D-217ENST00000581241 LRRC27Q9C0I9 530 aa16.68■□□□□ 0.26
CSNK1D-217ENST00000581241 NOP2P46087 812 aaKnown RBP16.68■□□□□ 0.26
CSNK1D-217ENST00000581241 AMOTQ4VCS5 1084 aa16.68■□□□□ 0.26
CSNK1D-217ENST00000581241 TMEM67Q5HYA8 995 aa16.68■□□□□ 0.26
CSNK1D-217ENST00000581241 FAM200AQ8TCP9 573 aa16.68■□□□□ 0.26
CSNK1D-217ENST00000581241 TCP11L1Q9NUJ3 509 aa16.68■□□□□ 0.26
CSNK1D-217ENST00000581241 IFIT5Q13325 482 aaKnown RBP16.68■□□□□ 0.26
CSNK1D-217ENST00000581241 CCDC82Q8N4S0 544 aa16.68■□□□□ 0.26
CSNK1D-217ENST00000581241 CCDC155Q8N6L0 562 aa16.68■□□□□ 0.26
CSNK1D-217ENST00000581241 PRPF4BQ13523 1007 aaKnown RBP16.67■□□□□ 0.26
CSNK1D-217ENST00000581241 DDX12PQ92771 950 aa16.67■□□□□ 0.26
CSNK1D-217ENST00000581241 ORC3Q9UBD5 711 aaPredicted RBP16.67■□□□□ 0.26
CSNK1D-217ENST00000581241 FSD2A1L4K1 749 aa16.67■□□□□ 0.26
CSNK1D-217ENST00000581241 SYKP43405 635 aa16.67■□□□□ 0.26
CSNK1D-217ENST00000581241 CETN1Q12798 172 aa16.67■□□□□ 0.26
CSNK1D-217ENST00000581241 HS1BP3Q53T59 392 aa16.67■□□□□ 0.26
CSNK1D-217ENST00000581241 NCOA7Q8NI08 942 aa16.67■□□□□ 0.26
CSNK1D-217ENST00000581241 RSPH14Q9UHP6 348 aa16.67■□□□□ 0.26
CSNK1D-217ENST00000581241 KIF14Q15058 1648 aa16.67■□□□□ 0.26
CSNK1D-217ENST00000581241 CTNNA2P26232 953 aa16.67■□□□□ 0.26
CSNK1D-217ENST00000581241 GOLGA1Q92805 767 aa16.67■□□□□ 0.26
CSNK1D-217ENST00000581241 SLU7O95391 586 aaKnown RBP16.67■□□□□ 0.26
CSNK1D-217ENST00000581241 SPATA24Q86W54 205 aa16.67■□□□□ 0.26
CSNK1D-217ENST00000581241 CCDC186Q7Z3E2 898 aa16.66■□□□□ 0.26
CSNK1D-217ENST00000581241 DZIP1Q86YF9 867 aaKnown RBP16.66■□□□□ 0.26
CSNK1D-217ENST00000581241 CYLC1P35663 651 aaPredicted RBP16.66■□□□□ 0.26
CSNK1D-217ENST00000581241 DNAI1Q9UI46 699 aa16.66■□□□□ 0.26
CSNK1D-217ENST00000581241 ZNF652Q9Y2D9 606 aa16.66■□□□□ 0.26
CSNK1D-217ENST00000581241 SCAF11Q99590 1463 aaKnown RBP16.66■□□□□ 0.26
CSNK1D-217ENST00000581241 FLIIQ13045 1269 aa16.66■□□□□ 0.26
CSNK1D-217ENST00000581241 CCDC144CPQ8IYA2 1237 aa16.66■□□□□ 0.26
CSNK1D-217ENST00000581241 EXOC1Q9NV70 894 aa16.66■□□□□ 0.26
CSNK1D-217ENST00000581241 N4BP3O15049 544 aa16.66■□□□□ 0.26
CSNK1D-217ENST00000581241 CCDC96Q2M329 555 aa16.66■□□□□ 0.26
CSNK1D-217ENST00000581241 PIK3R4Q99570 1358 aa16.66■□□□□ 0.26
CSNK1D-217ENST00000581241 KCNG4Q8TDN1 519 aa16.65■□□□□ 0.26
CSNK1D-217ENST00000581241 MSL1Q68DK7 614 aa16.65■□□□□ 0.26
CSNK1D-217ENST00000581241 BICDL1Q6ZP65 573 aa16.65■□□□□ 0.26
CSNK1D-217ENST00000581241 KIF5BP33176 963 aa16.65■□□□□ 0.26
CSNK1D-217ENST00000581241 FERMT2Q96AC1 680 aa16.65■□□□□ 0.26
CSNK1D-217ENST00000581241 SLC26A6Q9BXS9 759 aa16.65■□□□□ 0.26
CSNK1D-217ENST00000581241 MACROD2A1Z1Q3 448 aa16.65■□□□□ 0.26
CSNK1D-217ENST00000581241 CRACR2BQ8N4Y2 399 aaPredicted RBP16.65■□□□□ 0.26
CSNK1D-217ENST00000581241 TRIM47Q96LD4 638 aa16.65■□□□□ 0.26
CSNK1D-217ENST00000581241 RRAGBQ5VZM2 374 aa16.65■□□□□ 0.26
CSNK1D-217ENST00000581241 STXBP4Q6ZWJ1 553 aa16.65■□□□□ 0.26
CSNK1D-217ENST00000581241 MAP3K2Q9Y2U5 619 aa16.65■□□□□ 0.26
CSNK1D-217ENST00000581241 CCDC61Q9Y6R9 512 aa16.65■□□□□ 0.26
CSNK1D-217ENST00000581241 DBF4Q9UBU7 674 aaPredicted RBP16.64■□□□□ 0.25
CSNK1D-217ENST00000581241 F13A1P00488 732 aa16.64■□□□□ 0.25
CSNK1D-217ENST00000581241 PIP4K2BP78356 416 aa16.64■□□□□ 0.25
CSNK1D-217ENST00000581241 IFT140Q96RY7 1462 aa16.64■□□□□ 0.25
CSNK1D-217ENST00000581241 CTAGE9A4FU28 777 aa16.64■□□□□ 0.25
CSNK1D-217ENST00000581241 AOPEPQ8N6M6 819 aa16.64■□□□□ 0.25
CSNK1D-217ENST00000581241 RASAL2Q9UJF2 1139 aa16.64■□□□□ 0.25
CSNK1D-217ENST00000581241 RALGAPBQ86X10 1494 aa16.64■□□□□ 0.25
CSNK1D-217ENST00000581241 SDSP20132 328 aa16.64■□□□□ 0.25
CSNK1D-217ENST00000581241 TMOD2Q9NZR1 351 aa16.64■□□□□ 0.25
CSNK1D-217ENST00000581241 ATP2C2O75185 946 aa16.63■□□□□ 0.25
CSNK1D-217ENST00000581241 SELENOOQ9BVL4 669 aa16.63■□□□□ 0.25
CSNK1D-217ENST00000581241 PANK2Q9BZ23 570 aa16.63■□□□□ 0.25
CSNK1D-217ENST00000581241 TUBB4BP68371 445 aa16.63■□□□□ 0.25
CSNK1D-217ENST00000581241 KIAA0753Q2KHM9 967 aa16.63■□□□□ 0.25
CSNK1D-217ENST00000581241 MRPS27Q92552 414 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-217ENST00000581241 MBIPQ9NS73 344 aa16.63■□□□□ 0.25
CSNK1D-217ENST00000581241 PRC1O43663 620 aa16.63■□□□□ 0.25
CSNK1D-217ENST00000581241 CCDC172P0C7W6 258 aa16.63■□□□□ 0.25
CSNK1D-217ENST00000581241 SYT1P21579 422 aa16.63■□□□□ 0.25
CSNK1D-217ENST00000581241 C8orf34Q49A92 452 aa16.63■□□□□ 0.25
CSNK1D-217ENST00000581241 HOMER2Q9NSB8 354 aa16.63■□□□□ 0.25
CSNK1D-217ENST00000581241 RAB3GAP1Q15042 981 aa16.62■□□□□ 0.25
CSNK1D-217ENST00000581241 STMN4Q9H169 189 aaPredicted RBP16.62■□□□□ 0.25
CSNK1D-217ENST00000581241 A0A1W2PRG0 241 aa16.62■□□□□ 0.25
CSNK1D-217ENST00000581241 CCDC129Q6ZRS4 1044 aa16.62■□□□□ 0.25
CSNK1D-217ENST00000581241 TMOD3Q9NYL9 352 aa16.62■□□□□ 0.25
CSNK1D-217ENST00000581241 MYO1BO43795 1136 aa16.62■□□□□ 0.25
CSNK1D-217ENST00000581241 TCERG1LQ5VWI1 586 aa16.62■□□□□ 0.25
CSNK1D-217ENST00000581241 MFSD6Q6ZSS7 791 aa16.62■□□□□ 0.25
CSNK1D-217ENST00000581241 NECAB1Q8N987 351 aa16.62■□□□□ 0.25
CSNK1D-217ENST00000581241 ESYT1Q9BSJ8 1104 aa16.62■□□□□ 0.25
CSNK1D-217ENST00000581241 TSHZ3Q63HK5 1081 aa16.62■□□□□ 0.25
CSNK1D-217ENST00000581241 NME9Q86XW9 330 aa16.62■□□□□ 0.25
CSNK1D-217ENST00000581241 KIF4AO95239 1232 aa16.62■□□□□ 0.25
CSNK1D-217ENST00000581241 TTC31Q49AM3 519 aaPredicted RBP16.62■□□□□ 0.25
CSNK1D-217ENST00000581241 DNAJC25Q9H1X3 360 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms