RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 CNTNAP3BQ96NU0 1288 aa8.08□□□□□ -1.12
NF1-220ENST00000581113 CNTNAP3Q9BZ76 1288 aa8.08□□□□□ -1.12
NF1-220ENST00000581113 MARK1Q9P0L2 795 aa8.08□□□□□ -1.12
NF1-220ENST00000581113 HCN2Q9UL51 889 aa8.08□□□□□ -1.12
NF1-220ENST00000581113 USP20Q9Y2K6 914 aa8.08□□□□□ -1.12
NF1-220ENST00000581113 FAM13AO94988 1023 aa8.07□□□□□ -1.12
NF1-220ENST00000581113 EPB42P16452 691 aa8.07□□□□□ -1.12
NF1-220ENST00000581113 CTBSQ01459 385 aa8.07□□□□□ -1.12
NF1-220ENST00000581113 AAMPQ13685 434 aa8.07□□□□□ -1.12
NF1-220ENST00000581113 LAMC2Q13753 1193 aa8.07□□□□□ -1.12
NF1-220ENST00000581113 NOM1Q5C9Z4 860 aaKnown RBP8.07□□□□□ -1.12
NF1-220ENST00000581113 ATCAYQ86WG3 371 aa8.07□□□□□ -1.12
NF1-220ENST00000581113 RGL4Q8IZJ4 473 aa8.07□□□□□ -1.12
NF1-220ENST00000581113 KCNH4Q9UQ05 1017 aa8.07□□□□□ -1.12
NF1-220ENST00000581113 OPLAHO14841 1288 aa8.06□□□□□ -1.12
NF1-220ENST00000581113 BMP4P12644 408 aa8.06□□□□□ -1.12
NF1-220ENST00000581113 EIF1AXP47813 144 aaKnown RBP8.06□□□□□ -1.12
NF1-220ENST00000581113 KRT76Q01546 638 aa8.06□□□□□ -1.12
NF1-220ENST00000581113 MBIPQ9NS73 344 aa8.06□□□□□ -1.12
NF1-220ENST00000581113 SOWAHDA6NJG2 315 aa8.06□□□□□ -1.12
NF1-220ENST00000581113 GRIN2CQ14957 1233 aa8.06□□□□□ -1.12
NF1-220ENST00000581113 LCE2AQ5TA79 106 aaPredicted RBP8.06□□□□□ -1.12
NF1-220ENST00000581113 GPR152Q8TDT2 470 aa8.06□□□□□ -1.12
NF1-220ENST00000581113 NSFL1CQ9UNZ2 370 aaKnown RBP8.06□□□□□ -1.12
NF1-220ENST00000581113 RTCBQ9Y3I0 505 aaKnown RBP8.06□□□□□ -1.12
NF1-220ENST00000581113 NPR3P17342 541 aa8.05□□□□□ -1.12
NF1-220ENST00000581113 KCNQ4P56696 695 aa8.05□□□□□ -1.12
NF1-220ENST00000581113 CMTR1Q8N1G2 835 aaKnown RBP8.05□□□□□ -1.12
NF1-220ENST00000581113 FAM13BQ9NYF5 915 aa8.05□□□□□ -1.12
NF1-220ENST00000581113 BIN2Q9UBW5 565 aaPredicted RBP8.05□□□□□ -1.12
NF1-220ENST00000581113 PRR12Q9ULL5 1215 aa8.05□□□□□ -1.12
NF1-220ENST00000581113 IGF1RP08069 1367 aa8.04□□□□□ -1.12
NF1-220ENST00000581113 C2CD2LO14523 706 aa8.04□□□□□ -1.12
NF1-220ENST00000581113 GRNP28799 593 aaKnown RBP8.04□□□□□ -1.12
NF1-220ENST00000581113 DNM1Q05193 864 aaKnown RBP8.04□□□□□ -1.12
NF1-220ENST00000581113 SPEM2Q0P670 501 aa8.04□□□□□ -1.12
NF1-220ENST00000581113 FAM182BQ5T319 152 aa8.04□□□□□ -1.12
NF1-220ENST00000581113 ALKBH2Q6NS38 261 aa8.04□□□□□ -1.12
NF1-220ENST00000581113 RAB44Q7Z6P3 723 aaPredicted RBP8.04□□□□□ -1.12
NF1-220ENST00000581113 PIK3R5Q8WYR1 880 aa8.04□□□□□ -1.12
NF1-220ENST00000581113 MAP2K3P46734 347 aa8.02□□□□□ -1.13
NF1-220ENST00000581113 SRSF11Q05519 484 aaKnown RBP8.02□□□□□ -1.13
NF1-220ENST00000581113 EDEM1Q92611 657 aa8.02□□□□□ -1.13
NF1-220ENST00000581113 SLC30A3Q99726 388 aa8.02□□□□□ -1.13
NF1-220ENST00000581113 XYLBO75191 536 aa8.01□□□□□ -1.13
NF1-220ENST00000581113 ADAMTS2O95450 1211 aa8.01□□□□□ -1.13
NF1-220ENST00000581113 ARHGAP4P98171 946 aa8.01□□□□□ -1.13
NF1-220ENST00000581113 CCINQ13939 588 aa8.01□□□□□ -1.13
NF1-220ENST00000581113 KRT25Q7Z3Z0 450 aa8.01□□□□□ -1.13
NF1-220ENST00000581113 NUDT16Q96DE0 195 aaKnown RBP8.01□□□□□ -1.13
NF1-220ENST00000581113 PNMA5Q96PV4 448 aa8.01□□□□□ -1.13
NF1-220ENST00000581113 PCSK2P16519 638 aa8□□□□□ -1.13
NF1-220ENST00000581113 NEUROD1Q13562 356 aa8□□□□□ -1.13
NF1-220ENST00000581113 TRIP4Q15650 581 aaPredicted RBP8□□□□□ -1.13
NF1-220ENST00000581113 ECM1Q16610 540 aa8□□□□□ -1.13
NF1-220ENST00000581113 TTC16Q8NEE8 873 aa8□□□□□ -1.13
NF1-220ENST00000581113 BHMTQ93088 406 aa8□□□□□ -1.13
NF1-220ENST00000581113 GSX2Q9BZM3 304 aa8□□□□□ -1.13
NF1-220ENST00000581113 POLIQ9UNA4 740 aa8□□□□□ -1.13
NF1-220ENST00000581113 KCNMB2Q9Y691 235 aa8□□□□□ -1.13
NF1-220ENST00000581113 ZBTB7CA1YPR0 619 aa8□□□□□ -1.13
NF1-220ENST00000581113 UBAP1LF5GYI3 381 aa8□□□□□ -1.13
NF1-220ENST00000581113 FZD6O60353 706 aa8□□□□□ -1.13
NF1-220ENST00000581113 PDGFAP04085 211 aa8□□□□□ -1.13
NF1-220ENST00000581113 MZF1P28698 734 aaPredicted RBP8□□□□□ -1.13
NF1-220ENST00000581113 PCBP4P57723 403 aaKnown RBP8□□□□□ -1.13
NF1-220ENST00000581113 ZNF468Q5VIY5 522 aaPredicted RBP8□□□□□ -1.13
NF1-220ENST00000581113 SYT9Q86SS6 491 aa8□□□□□ -1.13
NF1-220ENST00000581113 CCDC87Q9NVE4 849 aa8□□□□□ -1.13
NF1-220ENST00000581113 BRPF3Q9ULD4 1205 aa8□□□□□ -1.13
NF1-220ENST00000581113 SASH3O75995 380 aa7.99□□□□□ -1.13
NF1-220ENST00000581113 C8orf34Q49A92 452 aa7.99□□□□□ -1.13
NF1-220ENST00000581113 OXCT2Q9BYC2 517 aaPredicted RBP7.99□□□□□ -1.13
NF1-220ENST00000581113 FNDC3AQ9Y2H6 1198 aaKnown RBP7.99□□□□□ -1.13
NF1-220ENST00000581113 SLURP2P0DP57 97 aa7.98□□□□□ -1.13
NF1-220ENST00000581113 ARAFP10398 606 aa7.98□□□□□ -1.13
NF1-220ENST00000581113 NFKB1P19838 968 aa7.98□□□□□ -1.13
NF1-220ENST00000581113 GZF1Q9H116 711 aaPredicted RBP7.98□□□□□ -1.13
NF1-220ENST00000581113 C11orf16Q9NQ32 467 aa7.98□□□□□ -1.13
NF1-220ENST00000581113 GGA1Q9UJY5 639 aa7.98□□□□□ -1.13
NF1-220ENST00000581113 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.98□□□□□ -1.13
NF1-220ENST00000581113 NEURL1BA8MQ27 555 aa7.97□□□□□ -1.13
NF1-220ENST00000581113 WIPF1O43516 503 aa7.97□□□□□ -1.13
NF1-220ENST00000581113 NDUFB5O43674 189 aa7.97□□□□□ -1.13
NF1-220ENST00000581113 RARAP10276 462 aa7.97□□□□□ -1.13
NF1-220ENST00000581113 TARSP26639 723 aaKnown RBP7.97□□□□□ -1.13
NF1-220ENST00000581113 ADH6P28332 368 aa7.97□□□□□ -1.13
NF1-220ENST00000581113 ACDQ96AP0 544 aa7.97□□□□□ -1.13
NF1-220ENST00000581113 IGFLR1Q9H665 355 aa7.97□□□□□ -1.13
NF1-220ENST00000581113 A6NHS1 94 aa7.96□□□□□ -1.13
NF1-220ENST00000581113 EGFRP00533 1210 aa7.96□□□□□ -1.13
NF1-220ENST00000581113 RPLP1P05386 114 aaKnown RBP7.96□□□□□ -1.13
NF1-220ENST00000581113 USP5P45974 858 aa7.96□□□□□ -1.13
NF1-220ENST00000581113 GGNBP2Q9H3C7 697 aa7.96□□□□□ -1.13
NF1-220ENST00000581113 AVENQ9NQS1 362 aaPredicted RBP7.96□□□□□ -1.13
NF1-220ENST00000581113 TBC1D8BQ0IIM8 1120 aa7.95□□□□□ -1.14
NF1-220ENST00000581113 SND1Q7KZF4 910 aaKnown RBP eCLIP7.95□□□□□ -1.14
NF1-220ENST00000581113 ZNF438Q7Z4V0 828 aa7.95□□□□□ -1.14
NF1-220ENST00000581113 NLRP13Q86W25 1043 aa7.95□□□□□ -1.14
NF1-220ENST00000581113 GOLGA6L1Q8N7Z2 621 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms