RNA–Protein interactions for RNA: ENST00000581055.1

TOP2A-205, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 4

Gene TOP2A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-205ENST00000581055 NEXNQ0ZGT2 675 aa23.15■■□□□ 1.3
TOP2A-205ENST00000581055 FKBP5Q13451 457 aaPredicted RBP23.15■■□□□ 1.3
TOP2A-205ENST00000581055 STYK1Q6J9G0 422 aa23.15■■□□□ 1.3
TOP2A-205ENST00000581055 G2E3Q7L622 706 aa23.15■■□□□ 1.3
TOP2A-205ENST00000581055 ZNF622Q969S3 477 aaKnown RBP eCLIP23.15■■□□□ 1.32e-24■□□□□ 9.9
TOP2A-205ENST00000581055 MASTLQ96GX5 879 aa23.14■■□□□ 1.29
TOP2A-205ENST00000581055 MYD88Q99836 296 aa23.14■■□□□ 1.29
TOP2A-205ENST00000581055 SH3TC1Q8TE82 1336 aa23.13■■□□□ 1.29
TOP2A-205ENST00000581055 AFDNP55196 1824 aaKnown RBP23.13■■□□□ 1.29
TOP2A-205ENST00000581055 NPR1P16066 1061 aa23.13■■□□□ 1.29
TOP2A-205ENST00000581055 SLC10A5Q5PT55 438 aa23.13■■□□□ 1.29
TOP2A-205ENST00000581055 CNKSR1Q969H4 720 aa23.13■■□□□ 1.29
TOP2A-205ENST00000581055 CCDC191Q8NCU4 936 aa23.12■■□□□ 1.29
TOP2A-205ENST00000581055 ABCC12Q96J65 1359 aa23.12■■□□□ 1.29
TOP2A-205ENST00000581055 RIC1Q4ADV7 1423 aa23.11■■□□□ 1.29
TOP2A-205ENST00000581055 NUP98P52948 1817 aa23.11■■□□□ 1.29
TOP2A-205ENST00000581055 NLRP3Q96P20 1036 aa23.11■■□□□ 1.29
TOP2A-205ENST00000581055 ADCY9O60503 1353 aa23.11■■□□□ 1.29
TOP2A-205ENST00000581055 ZBED9Q6R2W3 1325 aa23.1■■□□□ 1.29
TOP2A-205ENST00000581055 HSP90B1P14625 803 aaKnown RBP23.1■■□□□ 1.29
TOP2A-205ENST00000581055 CRY2Q49AN0 593 aa23.1■■□□□ 1.29
TOP2A-205ENST00000581055 CWC25Q9NXE8 425 aaPredicted RBP23.1■■□□□ 1.29
TOP2A-205ENST00000581055 KIAA1551Q9HCM1 1747 aa23.1■■□□□ 1.29
TOP2A-205ENST00000581055 ALDH1L2Q3SY69 923 aa23.09■■□□□ 1.29
TOP2A-205ENST00000581055 DNAAF4Q8WXU2 420 aa23.09■■□□□ 1.29
TOP2A-205ENST00000581055 RPGRQ92834 1020 aaKnown RBP23.09■■□□□ 1.29
TOP2A-205ENST00000581055 ALDH1B1P30837 517 aa23.08■■□□□ 1.29
TOP2A-205ENST00000581055 ARHGAP27Q6ZUM4 889 aa23.08■■□□□ 1.29
TOP2A-205ENST00000581055 ZBTB38Q8NAP3 1195 aaPredicted RBP23.08■■□□□ 1.29
TOP2A-205ENST00000581055 FAM89AQ96GI7 184 aa23.08■■□□□ 1.29
TOP2A-205ENST00000581055 N4BP2Q86UW6 1770 aaPredicted RBP23.07■■□□□ 1.28
TOP2A-205ENST00000581055 MRPL50Q8N5N7 158 aaKnown RBP23.07■■□□□ 1.28
TOP2A-205ENST00000581055 SSH1Q8WYL5 1049 aa23.07■■□□□ 1.28
TOP2A-205ENST00000581055 HCLS1P14317 486 aaPredicted RBP23.06■■□□□ 1.28
TOP2A-205ENST00000581055 PRPF40BQ6NWY9 871 aaKnown RBP23.06■■□□□ 1.28
TOP2A-205ENST00000581055 RBM17Q96I25 401 aaKnown RBP23.06■■□□□ 1.28
TOP2A-205ENST00000581055 PCCAP05165 728 aaPredicted RBP23.05■■□□□ 1.28
TOP2A-205ENST00000581055 IGKV5-2P06315 115 aa23.05■■□□□ 1.28
TOP2A-205ENST00000581055 HOXA10P31260 410 aaPredicted RBP23.05■■□□□ 1.28
TOP2A-205ENST00000581055 SYNE4Q8N205 404 aa23.05■■□□□ 1.28
TOP2A-205ENST00000581055 LINS1Q8NG48 757 aa23.05■■□□□ 1.28
TOP2A-205ENST00000581055 SMC4Q9NTJ3 1288 aa23.05■■□□□ 1.28
TOP2A-205ENST00000581055 PTPRCP08575 1304 aa23.05■■□□□ 1.28
TOP2A-205ENST00000581055 NEURL1BA8MQ27 555 aa23.04■■□□□ 1.28
TOP2A-205ENST00000581055 IRS4O14654 1257 aaPredicted RBP23.04■■□□□ 1.28
TOP2A-205ENST00000581055 YY1P25490 414 aa23.04■■□□□ 1.28
TOP2A-205ENST00000581055 SOGA3Q5TF21 947 aa23.04■■□□□ 1.28
TOP2A-205ENST00000581055 GOLGB1Q14789 3259 aaKnown RBP23.03■■□□□ 1.28
TOP2A-205ENST00000581055 RTL5Q5HYW3 569 aaPredicted RBP23.03■■□□□ 1.28
TOP2A-205ENST00000581055 CRAMP1Q96RY5 1269 aa23.03■■□□□ 1.28
TOP2A-205ENST00000581055 ANKRD31Q8N7Z5 1873 aa23.02■■□□□ 1.28
TOP2A-205ENST00000581055 ARFGEF2Q9Y6D5 1785 aa23.02■■□□□ 1.28
TOP2A-205ENST00000581055 F6X3S4 739 aa23.02■■□□□ 1.28
TOP2A-205ENST00000581055 C21orf2O43822 256 aa23.02■■□□□ 1.28
TOP2A-205ENST00000581055 CWF19L2Q2TBE0 894 aaKnown RBP23.02■■□□□ 1.28
TOP2A-205ENST00000581055 C3orf67Q6ZVT6 689 aa23.02■■□□□ 1.28
TOP2A-205ENST00000581055 BCL2L13Q9BXK5 485 aa23.02■■□□□ 1.28
TOP2A-205ENST00000581055 ANKRD36CQ5JPF3 1778 aa23.01■■□□□ 1.27
TOP2A-205ENST00000581055 GCKRQ14397 625 aa23■■□□□ 1.27
TOP2A-205ENST00000581055 DDX46Q7L014 1031 aaKnown RBP23■■□□□ 1.27
TOP2A-205ENST00000581055 ZNF219Q9P2Y4 722 aaPredicted RBP23■■□□□ 1.27
TOP2A-205ENST00000581055 RARSP54136 660 aaKnown RBP22.99■■□□□ 1.27
TOP2A-205ENST00000581055 BRPF1P55201 1214 aaPredicted RBP22.99■■□□□ 1.27
TOP2A-205ENST00000581055 SF3B3Q15393 1217 aaKnown RBP22.99■■□□□ 1.27
TOP2A-205ENST00000581055 BEND3Q5T5X7 828 aa22.99■■□□□ 1.27
TOP2A-205ENST00000581055 SLC4A10Q6U841 1118 aa22.99■■□□□ 1.27
TOP2A-205ENST00000581055 CDHR2Q9BYE9 1310 aa22.99■■□□□ 1.27
TOP2A-205ENST00000581055 PDE8AO60658 829 aa22.98■■□□□ 1.27
TOP2A-205ENST00000581055 C7orf43Q8WVR3 580 aa22.98■■□□□ 1.27
TOP2A-205ENST00000581055 TMX4Q9H1E5 349 aaPredicted RBP22.98■■□□□ 1.27
TOP2A-205ENST00000581055 DLEC1Q9Y238 1755 aa22.98■■□□□ 1.27
TOP2A-205ENST00000581055 UTRNP46939 3433 aa22.97■■□□□ 1.27
TOP2A-205ENST00000581055 COL11A2P13942 1736 aaPredicted RBP22.97■■□□□ 1.27
TOP2A-205ENST00000581055 BRCA1P38398 1863 aaKnown RBP22.97■■□□□ 1.27
TOP2A-205ENST00000581055 H7C1W4 665 aa22.97■■□□□ 1.27
TOP2A-205ENST00000581055 ALDH1L1O75891 902 aa22.97■■□□□ 1.27
TOP2A-205ENST00000581055 BBOX1O75936 387 aa22.97■■□□□ 1.27
TOP2A-205ENST00000581055 CCDC93Q567U6 631 aa22.97■■□□□ 1.27
TOP2A-205ENST00000581055 CC2D2BQ6DHV5 1058 aa22.97■■□□□ 1.27
TOP2A-205ENST00000581055 SRCIN1Q9C0H9 1055 aa22.97■■□□□ 1.27
TOP2A-205ENST00000581055 TNRC6CQ9HCJ0 1690 aaKnown RBP22.97■■□□□ 1.27
TOP2A-205ENST00000581055 UBE3BQ7Z3V4 1068 aa22.96■■□□□ 1.27
TOP2A-205ENST00000581055 RTKN2Q8IZC4 609 aa22.96■■□□□ 1.27
TOP2A-205ENST00000581055 JARID2Q92833 1246 aaPredicted RBP22.96■■□□□ 1.27
TOP2A-205ENST00000581055 PPEF1O14829 653 aaPredicted RBP22.95■■□□□ 1.26
TOP2A-205ENST00000581055 ABCC4O15439 1325 aa22.95■■□□□ 1.26
TOP2A-205ENST00000581055 CCDC152Q4G0S7 254 aa22.95■■□□□ 1.26
TOP2A-205ENST00000581055 GRIPAP1Q4V328 841 aa22.95■■□□□ 1.26
TOP2A-205ENST00000581055 KIF16BQ96L93 1317 aa22.95■■□□□ 1.26
TOP2A-205ENST00000581055 CACNA1FO60840 1977 aa22.94■■□□□ 1.26
TOP2A-205ENST00000581055 GRAPQ13588 217 aa22.94■■□□□ 1.26
TOP2A-205ENST00000581055 GRAPLQ8TC17 118 aaPredicted RBP22.94■■□□□ 1.26
TOP2A-205ENST00000581055 API5Q9BZZ5 524 aaKnown RBP22.94■■□□□ 1.26
TOP2A-205ENST00000581055 NOB1Q9ULX3 412 aaKnown RBP22.94■■□□□ 1.26
TOP2A-205ENST00000581055 TMC4Q7Z404 712 aa22.93■■□□□ 1.26
TOP2A-205ENST00000581055 TAOK3Q9H2K8 898 aa22.93■■□□□ 1.26
TOP2A-205ENST00000581055 C9orf78Q9NZ63 289 aaPredicted RBP22.93■■□□□ 1.26
TOP2A-205ENST00000581055 LTBP3Q9NS15 1303 aa22.92■■□□□ 1.26
TOP2A-205ENST00000581055 NFKBIEO00221 500 aa22.92■■□□□ 1.26
TOP2A-205ENST00000581055 IPO8O15397 1037 aaKnown RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 249.6 ms