RNA–Protein interactions for RNA: ENST00000581000.1

NEK8-205, Transcript of NIMA related kinase 8, humanhuman

TSL 3

Gene NEK8, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK8-205ENST00000581000 TBC1D2BQ9UPU7 963 aa17.22■□□□□ 0.35
NEK8-205ENST00000581000 LRRFIP2Q9Y608 721 aaKnown RBP17.22■□□□□ 0.35
NEK8-205ENST00000581000 CDHR2Q9BYE9 1310 aa17.21■□□□□ 0.35
NEK8-205ENST00000581000 ATP5J2-PTCD1G3V325 749 aa17.21■□□□□ 0.35
NEK8-205ENST00000581000 POLA2Q14181 598 aa17.21■□□□□ 0.35
NEK8-205ENST00000581000 HLFQ16534 295 aa17.21■□□□□ 0.35
NEK8-205ENST00000581000 RABL6Q3YEC7 729 aaPredicted RBP17.21■□□□□ 0.35
NEK8-205ENST00000581000 TRAPPC3LQ5T215 181 aa17.21■□□□□ 0.35
NEK8-205ENST00000581000 NLRP10Q86W26 655 aa17.21■□□□□ 0.35
NEK8-205ENST00000581000 ZBTB38Q8NAP3 1195 aaPredicted RBP17.21■□□□□ 0.35
NEK8-205ENST00000581000 PLA2G12BQ9BX93 195 aa17.21■□□□□ 0.35
NEK8-205ENST00000581000 C1orf115Q9H7X2 142 aa17.21■□□□□ 0.35
NEK8-205ENST00000581000 YY1P25490 414 aa17.2■□□□□ 0.34
NEK8-205ENST00000581000 BCORQ6W2J9 1755 aa17.2■□□□□ 0.34
NEK8-205ENST00000581000 ZPR1O75312 459 aa17.19■□□□□ 0.34
NEK8-205ENST00000581000 HSP90AB4PQ58FF6 505 aa17.19■□□□□ 0.34
NEK8-205ENST00000581000 SUCLG2Q96I99 432 aa17.19■□□□□ 0.34
NEK8-205ENST00000581000 ARXQ96QS3 562 aa17.19■□□□□ 0.34
NEK8-205ENST00000581000 ANKRD36CQ5JPF3 1778 aa17.19■□□□□ 0.34
NEK8-205ENST00000581000 SCN7AQ01118 1682 aa17.18■□□□□ 0.34
NEK8-205ENST00000581000 KCNQ4P56696 695 aa17.18■□□□□ 0.34
NEK8-205ENST00000581000 PPP1R42Q7Z4L9 355 aa17.18■□□□□ 0.34
NEK8-205ENST00000581000 ARHGEF1Q92888 912 aaKnown RBP17.18■□□□□ 0.34
NEK8-205ENST00000581000 USP42Q9H9J4 1324 aaKnown RBP17.18■□□□□ 0.34
NEK8-205ENST00000581000 RAB11FIP3O75154 756 aa17.17■□□□□ 0.34
NEK8-205ENST00000581000 RFC4P35249 363 aa17.17■□□□□ 0.34
NEK8-205ENST00000581000 UBE3BQ7Z3V4 1068 aa17.17■□□□□ 0.34
NEK8-205ENST00000581000 AKT1S1Q96B36 256 aa17.17■□□□□ 0.34
NEK8-205ENST00000581000 KAZALD1Q96I82 304 aa17.17■□□□□ 0.34
NEK8-205ENST00000581000 NOP58Q9Y2X3 529 aaKnown RBP17.17■□□□□ 0.34
NEK8-205ENST00000581000 NUCB1Q02818 461 aa17.16■□□□□ 0.34
NEK8-205ENST00000581000 BICC1Q9H694 974 aaKnown RBP17.16■□□□□ 0.34
NEK8-205ENST00000581000 NUP98P52948 1817 aa17.16■□□□□ 0.34
NEK8-205ENST00000581000 AFDNP55196 1824 aaKnown RBP17.16■□□□□ 0.34
NEK8-205ENST00000581000 PNMA6EA0A0J9YXQ4 647 aa17.15■□□□□ 0.34
NEK8-205ENST00000581000 SRGAP3O43295 1099 aa17.15■□□□□ 0.34
NEK8-205ENST00000581000 UTP14AQ9BVJ6 771 aaKnown RBP17.15■□□□□ 0.34
NEK8-205ENST00000581000 NYXQ9GZU5 481 aa17.15■□□□□ 0.34
NEK8-205ENST00000581000 UBN2Q6ZU65 1347 aa17.15■□□□□ 0.34
NEK8-205ENST00000581000 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.14■□□□□ 0.33
NEK8-205ENST00000581000 USPL1Q5W0Q7 1092 aa17.14■□□□□ 0.33
NEK8-205ENST00000581000 BCL2L12Q9HB09 334 aa17.14■□□□□ 0.33
NEK8-205ENST00000581000 TRMT112Q9UI30 125 aaKnown RBP17.14■□□□□ 0.33
NEK8-205ENST00000581000 FBXO3Q9UK99 471 aa17.14■□□□□ 0.33
NEK8-205ENST00000581000 NIP7Q9Y221 180 aaKnown RBP eCLIP17.14■□□□□ 0.33
NEK8-205ENST00000581000 SH3TC1Q8TE82 1336 aa17.14■□□□□ 0.33
NEK8-205ENST00000581000 UBR3Q6ZT12 1888 aa17.14■□□□□ 0.33
NEK8-205ENST00000581000 CSF1RP07333 972 aa17.13■□□□□ 0.33
NEK8-205ENST00000581000 FOXO4P98177 505 aa17.13■□□□□ 0.33
NEK8-205ENST00000581000 ERC1Q8IUD2 1116 aa17.13■□□□□ 0.33
NEK8-205ENST00000581000 ZBTB47Q9UFB7 747 aaPredicted RBP17.13■□□□□ 0.33
NEK8-205ENST00000581000 PDZRN3Q9UPQ7 1066 aa17.13■□□□□ 0.33
NEK8-205ENST00000581000 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
NEK8-205ENST00000581000 PDE8AO60658 829 aa17.12■□□□□ 0.33
NEK8-205ENST00000581000 NTSR2O95665 410 aa17.12■□□□□ 0.33
NEK8-205ENST00000581000 GPTP24298 496 aa17.12■□□□□ 0.33
NEK8-205ENST00000581000 CHD1LQ86WJ1 897 aa17.12■□□□□ 0.33
NEK8-205ENST00000581000 SETDB2Q96T68 719 aa17.12■□□□□ 0.33
NEK8-205ENST00000581000 COPRSQ9NQ92 184 aa17.12■□□□□ 0.33
NEK8-205ENST00000581000 SLC10A5Q5PT55 438 aa17.11■□□□□ 0.33
NEK8-205ENST00000581000 SUSD4Q5VX71 490 aa17.11■□□□□ 0.33
NEK8-205ENST00000581000 SPON1Q9HCB6 807 aa17.11■□□□□ 0.33
NEK8-205ENST00000581000 IRS4O14654 1257 aaPredicted RBP17.1■□□□□ 0.33
NEK8-205ENST00000581000 EPHA10Q5JZY3 1008 aa17.1■□□□□ 0.33
NEK8-205ENST00000581000 ANKRD45Q5TZF3 282 aa17.1■□□□□ 0.33
NEK8-205ENST00000581000 KIF1BPQ96EK5 621 aa17.1■□□□□ 0.33
NEK8-205ENST00000581000 FAM89AQ96GI7 184 aa17.1■□□□□ 0.33
NEK8-205ENST00000581000 TFCP2L1Q9NZI6 479 aa17.1■□□□□ 0.33
NEK8-205ENST00000581000 RTL9Q8NET4 1388 aa17.1■□□□□ 0.33
NEK8-205ENST00000581000 RIC1Q4ADV7 1423 aa17.1■□□□□ 0.33
NEK8-205ENST00000581000 C4AP0C0L4 1744 aa17.1■□□□□ 0.33
NEK8-205ENST00000581000 TBC1D9BQ66K14 1250 aa17.09■□□□□ 0.33
NEK8-205ENST00000581000 LMBR1LQ6UX01 489 aa17.09■□□□□ 0.33
NEK8-205ENST00000581000 TPTE2Q6XPS3 522 aa17.09■□□□□ 0.33
NEK8-205ENST00000581000 AMIGO3Q86WK7 504 aa17.09■□□□□ 0.33
NEK8-205ENST00000581000 NLGN1Q8N2Q7 840 aa17.09■□□□□ 0.33
NEK8-205ENST00000581000 LRRCC1Q9C099 1032 aa17.09■□□□□ 0.33
NEK8-205ENST00000581000 PPP1R1BQ9UD71 204 aaPredicted RBP17.09■□□□□ 0.33
NEK8-205ENST00000581000 CARMIL3Q8ND23 1372 aa17.09■□□□□ 0.33
NEK8-205ENST00000581000 COL24A1Q17RW2 1714 aa17.09■□□□□ 0.33
NEK8-205ENST00000581000 SURF6O75683 361 aaKnown RBP17.08■□□□□ 0.32
NEK8-205ENST00000581000 PHF14O94880 888 aa17.08■□□□□ 0.32
NEK8-205ENST00000581000 GYS1P13807 737 aa17.08■□□□□ 0.32
NEK8-205ENST00000581000 RFX5P48382 616 aaPredicted RBP17.08■□□□□ 0.32
NEK8-205ENST00000581000 CTSWP56202 376 aa17.08■□□□□ 0.32
NEK8-205ENST00000581000 SLC15A2Q16348 729 aa17.08■□□□□ 0.32
NEK8-205ENST00000581000 ZNF827Q17R98 1081 aa17.08■□□□□ 0.32
NEK8-205ENST00000581000 STK32BQ9NY57 414 aa17.08■□□□□ 0.32
NEK8-205ENST00000581000 SRP68Q9UHB9 627 aaKnown RBP17.08■□□□□ 0.32
NEK8-205ENST00000581000 CIAO1O76071 339 aa17.07■□□□□ 0.32
NEK8-205ENST00000581000 TM4SF1P30408 202 aa17.07■□□□□ 0.32
NEK8-205ENST00000581000 PTPN12Q05209 780 aaKnown RBP17.07■□□□□ 0.32
NEK8-205ENST00000581000 TTLL11Q8NHH1 800 aa17.07■□□□□ 0.32
NEK8-205ENST00000581000 QSER1Q2KHR3 1735 aa17.07■□□□□ 0.32
NEK8-205ENST00000581000 UTRNP46939 3433 aa17.06■□□□□ 0.32
NEK8-205ENST00000581000 G3BP1Q13283 466 aaKnown RBP eCLIP17.06■□□□□ 0.32
NEK8-205ENST00000581000 CCDC57Q2TAC2 916 aa17.06■□□□□ 0.32
NEK8-205ENST00000581000 IFIT5Q13325 482 aaKnown RBP17.05■□□□□ 0.32
NEK8-205ENST00000581000 SF3B3Q15393 1217 aaKnown RBP17.05■□□□□ 0.32
NEK8-205ENST00000581000 RHPN1Q8TCX5 695 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms