RNA–Protein interactions for RNA: ENST00000580574.1

CCDC144CP-203, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 3

Gene CCDC144CP, Length 896 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-203ENST00000580574 UTYO14607 1347 aa16.35■□□□□ 0.21
CCDC144CP-203ENST00000580574 COL15A1P39059 1388 aa16.35■□□□□ 0.21
CCDC144CP-203ENST00000580574 TRIM28Q13263 835 aaKnown RBP16.34■□□□□ 0.21
CCDC144CP-203ENST00000580574 HLFQ16534 295 aa16.34■□□□□ 0.21
CCDC144CP-203ENST00000580574 GIGYF2Q6Y7W6 1299 aaKnown RBP16.34■□□□□ 0.21
CCDC144CP-203ENST00000580574 AMIGO3Q86WK7 504 aa16.34■□□□□ 0.21
CCDC144CP-203ENST00000580574 DZIP3Q86Y13 1208 aaKnown RBP16.34■□□□□ 0.21
CCDC144CP-203ENST00000580574 CAMTA2O94983 1202 aa16.33■□□□□ 0.2
CCDC144CP-203ENST00000580574 NEXNQ0ZGT2 675 aa16.33■□□□□ 0.2
CCDC144CP-203ENST00000580574 TCIRG1Q13488 830 aa16.33■□□□□ 0.2
CCDC144CP-203ENST00000580574 KIF6Q6ZMV9 814 aa16.33■□□□□ 0.2
CCDC144CP-203ENST00000580574 CCDC136Q96JN2 1154 aa16.33■□□□□ 0.2
CCDC144CP-203ENST00000580574 TBC1D2BQ9UPU7 963 aa16.33■□□□□ 0.2
CCDC144CP-203ENST00000580574 ZNF330Q9Y3S2 320 aaPredicted RBP16.33■□□□□ 0.2
CCDC144CP-203ENST00000580574 KDM2BQ8NHM5 1336 aa16.33■□□□□ 0.2
CCDC144CP-203ENST00000580574 RGL2O15211 777 aa16.32■□□□□ 0.2
CCDC144CP-203ENST00000580574 GNAI3P08754 354 aa16.32■□□□□ 0.2
CCDC144CP-203ENST00000580574 NBPF7P0C2Y1 421 aaPredicted RBP16.32■□□□□ 0.2
CCDC144CP-203ENST00000580574 GCKRQ14397 625 aa16.32■□□□□ 0.2
CCDC144CP-203ENST00000580574 QSER1Q2KHR3 1735 aa16.32■□□□□ 0.2
CCDC144CP-203ENST00000580574 MS4A3Q96HJ5 214 aa16.32■□□□□ 0.2
CCDC144CP-203ENST00000580574 CAMKK2Q96RR4 588 aa16.32■□□□□ 0.2
CCDC144CP-203ENST00000580574 A0A087WZG4 1122 aa16.31■□□□□ 0.2
CCDC144CP-203ENST00000580574 ATP5J2-PTCD1G3V325 749 aa16.31■□□□□ 0.2
CCDC144CP-203ENST00000580574 GNPATO15228 680 aa16.31■□□□□ 0.2
CCDC144CP-203ENST00000580574 IGHDP01880 384 aa16.31■□□□□ 0.2
CCDC144CP-203ENST00000580574 SMIM5Q71RC9 77 aa16.31■□□□□ 0.2
CCDC144CP-203ENST00000580574 SIRT2Q8IXJ6 389 aa16.31■□□□□ 0.2
CCDC144CP-203ENST00000580574 C1orf115Q9H7X2 142 aa16.31■□□□□ 0.2
CCDC144CP-203ENST00000580574 GRM8O00222 908 aa16.3■□□□□ 0.2
CCDC144CP-203ENST00000580574 HMGB2P26583 209 aaKnown RBP16.3■□□□□ 0.2
CCDC144CP-203ENST00000580574 CASP7P55210 303 aa16.3■□□□□ 0.2
CCDC144CP-203ENST00000580574 ZNF34Q8IZ26 560 aa16.3■□□□□ 0.2
CCDC144CP-203ENST00000580574 CCDC191Q8NCU4 936 aa16.3■□□□□ 0.2
CCDC144CP-203ENST00000580574 BCL2L12Q9HB09 334 aa16.3■□□□□ 0.2
CCDC144CP-203ENST00000580574 RTCBQ9Y3I0 505 aaKnown RBP16.3■□□□□ 0.2
CCDC144CP-203ENST00000580574 COL24A1Q17RW2 1714 aa16.3■□□□□ 0.2
CCDC144CP-203ENST00000580574 H7C1W4 665 aa16.29■□□□□ 0.2
CCDC144CP-203ENST00000580574 GNAI2P04899 355 aa16.29■□□□□ 0.2
CCDC144CP-203ENST00000580574 HDAC1Q13547 482 aaPredicted RBP16.29■□□□□ 0.2
CCDC144CP-203ENST00000580574 HSP90AB3PQ58FF7 597 aa16.29■□□□□ 0.2
CCDC144CP-203ENST00000580574 ANKRD44Q8N8A2 993 aa16.29■□□□□ 0.2
CCDC144CP-203ENST00000580574 KAZALD1Q96I82 304 aa16.29■□□□□ 0.2
CCDC144CP-203ENST00000580574 NARFQ9UHQ1 456 aa16.29■□□□□ 0.2
CCDC144CP-203ENST00000580574 UBTFL1P0CB47 393 aaPredicted RBP16.28■□□□□ 0.2
CCDC144CP-203ENST00000580574 CEP85Q6P2H3 762 aa16.28■□□□□ 0.2
CCDC144CP-203ENST00000580574 CLEC4GQ6UXB4 293 aa16.28■□□□□ 0.2
CCDC144CP-203ENST00000580574 RPAP2Q8IXW5 612 aaPredicted RBP16.28■□□□□ 0.2
CCDC144CP-203ENST00000580574 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
CCDC144CP-203ENST00000580574 ARHGEF1Q92888 912 aaKnown RBP16.28■□□□□ 0.2
CCDC144CP-203ENST00000580574 AK7Q96M32 723 aa16.28■□□□□ 0.2
CCDC144CP-203ENST00000580574 CWC25Q9NXE8 425 aaPredicted RBP16.28■□□□□ 0.2
CCDC144CP-203ENST00000580574 LRRFIP2Q9Y608 721 aaKnown RBP16.28■□□□□ 0.2
CCDC144CP-203ENST00000580574 CASZ1Q86V15 1759 aa16.28■□□□□ 0.2
CCDC144CP-203ENST00000580574 MYH3P11055 1940 aa16.27■□□□□ 0.2
CCDC144CP-203ENST00000580574 EN1Q05925 392 aaPredicted RBP16.27■□□□□ 0.2
CCDC144CP-203ENST00000580574 EZH2Q15910 746 aaKnown RBP16.27■□□□□ 0.2
CCDC144CP-203ENST00000580574 ZNF827Q17R98 1081 aa16.27■□□□□ 0.2
CCDC144CP-203ENST00000580574 NPM2Q86SE8 214 aaKnown RBP16.27■□□□□ 0.2
CCDC144CP-203ENST00000580574 NLRP10Q86W26 655 aa16.27■□□□□ 0.2
CCDC144CP-203ENST00000580574 RASEFQ8IZ41 740 aa16.27■□□□□ 0.2
CCDC144CP-203ENST00000580574 C9orf78Q9NZ63 289 aaPredicted RBP16.27■□□□□ 0.2
CCDC144CP-203ENST00000580574 LAMB2P55268 1798 aa16.27■□□□□ 0.2
CCDC144CP-203ENST00000580574 UBN2Q6ZU65 1347 aa16.26■□□□□ 0.19
CCDC144CP-203ENST00000580574 DDX60Q8IY21 1712 aaKnown RBP16.26■□□□□ 0.19
CCDC144CP-203ENST00000580574 SSFA2P28290 1259 aa16.26■□□□□ 0.19
CCDC144CP-203ENST00000580574 ARXQ96QS3 562 aa16.26■□□□□ 0.19
CCDC144CP-203ENST00000580574 USP42Q9H9J4 1324 aaKnown RBP16.25■□□□□ 0.19
CCDC144CP-203ENST00000580574 ATP8B2P98198 1209 aa16.25■□□□□ 0.19
CCDC144CP-203ENST00000580574 MTX1Q13505 466 aa16.25■□□□□ 0.19
CCDC144CP-203ENST00000580574 TRAPPC3LQ5T215 181 aa16.25■□□□□ 0.19
CCDC144CP-203ENST00000580574 CENPQQ7L2Z9 268 aaPredicted RBP16.25■□□□□ 0.19
CCDC144CP-203ENST00000580574 CCDC125Q86Z20 511 aa16.25■□□□□ 0.19
CCDC144CP-203ENST00000580574 PLCD3Q8N3E9 789 aa16.25■□□□□ 0.19
CCDC144CP-203ENST00000580574 SUCLG2Q96I99 432 aa16.25■□□□□ 0.19
CCDC144CP-203ENST00000580574 RWDD1Q9H446 243 aaPredicted RBP16.25■□□□□ 0.19
CCDC144CP-203ENST00000580574 SRP68Q9UHB9 627 aaKnown RBP16.25■□□□□ 0.19
CCDC144CP-203ENST00000580574 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.24■□□□□ 0.19
CCDC144CP-203ENST00000580574 PCCAP05165 728 aaPredicted RBP16.24■□□□□ 0.19
CCDC144CP-203ENST00000580574 USPL1Q5W0Q7 1092 aa16.24■□□□□ 0.19
CCDC144CP-203ENST00000580574 KIF12Q96FN5 646 aa16.24■□□□□ 0.19
CCDC144CP-203ENST00000580574 PNMA6EA0A0J9YXQ4 647 aa16.23■□□□□ 0.19
CCDC144CP-203ENST00000580574 GPTP24298 496 aa16.23■□□□□ 0.19
CCDC144CP-203ENST00000580574 BAG6P46379 1132 aa16.23■□□□□ 0.19
CCDC144CP-203ENST00000580574 EPHA10Q5JZY3 1008 aa16.23■□□□□ 0.19
CCDC144CP-203ENST00000580574 UBE3BQ7Z3V4 1068 aa16.23■□□□□ 0.19
CCDC144CP-203ENST00000580574 SMC5Q8IY18 1101 aa16.23■□□□□ 0.19
CCDC144CP-203ENST00000580574 JARID2Q92833 1246 aaPredicted RBP16.23■□□□□ 0.19
CCDC144CP-203ENST00000580574 ZNF652Q9Y2D9 606 aa16.23■□□□□ 0.19
CCDC144CP-203ENST00000580574 CDHR2Q9BYE9 1310 aa16.22■□□□□ 0.19
CCDC144CP-203ENST00000580574 FOXO4P98177 505 aa16.22■□□□□ 0.19
CCDC144CP-203ENST00000580574 RABL6Q3YEC7 729 aaPredicted RBP16.22■□□□□ 0.19
CCDC144CP-203ENST00000580574 PARP10Q53GL7 1025 aa16.22■□□□□ 0.19
CCDC144CP-203ENST00000580574 SUSD4Q5VX71 490 aa16.22■□□□□ 0.19
CCDC144CP-203ENST00000580574 ASTLQ6HA08 431 aaPredicted RBP16.22■□□□□ 0.19
CCDC144CP-203ENST00000580574 DEFB132Q7Z7B7 95 aa16.22■□□□□ 0.19
CCDC144CP-203ENST00000580574 ZBTB38Q8NAP3 1195 aaPredicted RBP16.22■□□□□ 0.19
CCDC144CP-203ENST00000580574 SSH3Q8TE77 659 aa16.22■□□□□ 0.19
CCDC144CP-203ENST00000580574 HDAC5Q9UQL6 1122 aa16.22■□□□□ 0.19
CCDC144CP-203ENST00000580574 ZPR1O75312 459 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms