RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 SAPCD2Q86UD0 394 aa12.55□□□□□ -0.4
SMARCD2-208ENST00000580054 ZNF652Q9Y2D9 606 aa12.55□□□□□ -0.4
SMARCD2-208ENST00000580054 KNSTRNQ9Y448 316 aa12.55□□□□□ -0.4
SMARCD2-208ENST00000580054 LAMB4A4D0S4 1761 aa12.55□□□□□ -0.4
SMARCD2-208ENST00000580054 CEMIPQ8WUJ3 1361 aa12.55□□□□□ -0.4
SMARCD2-208ENST00000580054 DIAPH1O60610 1272 aaKnown RBP12.54□□□□□ -0.4
SMARCD2-208ENST00000580054 CELF2O95319 508 aaKnown RBP12.54□□□□□ -0.4
SMARCD2-208ENST00000580054 SOX10P56693 466 aa12.54□□□□□ -0.4
SMARCD2-208ENST00000580054 CIAPIN1Q6FI81 312 aa12.54□□□□□ -0.4
SMARCD2-208ENST00000580054 USP50Q70EL3 339 aaPredicted RBP12.54□□□□□ -0.4
SMARCD2-208ENST00000580054 LARGE2Q8N3Y3 721 aa12.54□□□□□ -0.4
SMARCD2-208ENST00000580054 ZIC5Q96T25 663 aa12.54□□□□□ -0.4
SMARCD2-208ENST00000580054 GLIS2Q9BZE0 524 aaPredicted RBP12.54□□□□□ -0.4
SMARCD2-208ENST00000580054 BTBD11A6QL63 1104 aa12.53□□□□□ -0.4
SMARCD2-208ENST00000580054 NBPF26B4DH59 902 aa12.53□□□□□ -0.4
SMARCD2-208ENST00000580054 CA12O43570 354 aa12.53□□□□□ -0.4
SMARCD2-208ENST00000580054 ALDH1B1P30837 517 aa12.53□□□□□ -0.4
SMARCD2-208ENST00000580054 BRPF1P55201 1214 aaPredicted RBP12.53□□□□□ -0.4
SMARCD2-208ENST00000580054 HLFQ16534 295 aa12.53□□□□□ -0.4
SMARCD2-208ENST00000580054 CRY2Q49AN0 593 aa12.53□□□□□ -0.4
SMARCD2-208ENST00000580054 NBPF10Q6P3W6 841 aaKnown RBP12.53□□□□□ -0.4
SMARCD2-208ENST00000580054 NUTM1Q86Y26 1132 aa12.53□□□□□ -0.4
SMARCD2-208ENST00000580054 NBPF15Q8N660 670 aa12.53□□□□□ -0.4
SMARCD2-208ENST00000580054 GAS2L2Q8NHY3 880 aa12.52□□□□□ -0.41
SMARCD2-208ENST00000580054 ZNF408Q9H9D4 720 aa12.52□□□□□ -0.41
SMARCD2-208ENST00000580054 RIC1Q4ADV7 1423 aa12.52□□□□□ -0.41
SMARCD2-208ENST00000580054 TCERG1O14776 1098 aaKnown RBP12.51□□□□□ -0.41
SMARCD2-208ENST00000580054 ZEB1P37275 1124 aaPredicted RBP12.51□□□□□ -0.41
SMARCD2-208ENST00000580054 NIM1KQ8IY84 436 aa12.51□□□□□ -0.41
SMARCD2-208ENST00000580054 GPRC5DQ9NZD1 345 aa12.51□□□□□ -0.41
SMARCD2-208ENST00000580054 AKAP11Q9UKA4 1901 aa12.5□□□□□ -0.41
SMARCD2-208ENST00000580054 POLR2AP24928 1970 aaKnown RBP12.5□□□□□ -0.41
SMARCD2-208ENST00000580054 U2SURPO15042 1029 aaKnown RBP12.5□□□□□ -0.41
SMARCD2-208ENST00000580054 GTF2E1P29083 439 aaPredicted RBP12.5□□□□□ -0.41
SMARCD2-208ENST00000580054 AOC3Q16853 763 aa12.5□□□□□ -0.41
SMARCD2-208ENST00000580054 ADARB2Q9NS39 739 aaKnown RBP12.5□□□□□ -0.41
SMARCD2-208ENST00000580054 NPC1L1Q9UHC9 1359 aa12.5□□□□□ -0.41
SMARCD2-208ENST00000580054 PPEF1O14829 653 aaPredicted RBP12.49□□□□□ -0.41
SMARCD2-208ENST00000580054 PPIP5K2O43314 1243 aa12.49□□□□□ -0.41
SMARCD2-208ENST00000580054 GMPSP49915 693 aaPredicted RBP12.49□□□□□ -0.41
SMARCD2-208ENST00000580054 CC2D2BQ6DHV5 1058 aa12.49□□□□□ -0.41
SMARCD2-208ENST00000580054 DLK2Q6UY11 383 aa12.49□□□□□ -0.41
SMARCD2-208ENST00000580054 C3orf67Q6ZVT6 689 aa12.49□□□□□ -0.41
SMARCD2-208ENST00000580054 HHIPL1Q96JK4 782 aa12.49□□□□□ -0.41
SMARCD2-208ENST00000580054 LAMB2P55268 1798 aa12.48□□□□□ -0.41
SMARCD2-208ENST00000580054 SHTN1A0MZ66 631 aa12.48□□□□□ -0.41
SMARCD2-208ENST00000580054 SNRPA1P09661 255 aaKnown RBP12.48□□□□□ -0.41
SMARCD2-208ENST00000580054 HIRAP54198 1017 aaPredicted RBP12.48□□□□□ -0.41
SMARCD2-208ENST00000580054 CC2D1BQ5T0F9 858 aaKnown RBP12.48□□□□□ -0.41
SMARCD2-208ENST00000580054 TRPM4Q8TD43 1214 aa12.48□□□□□ -0.41
SMARCD2-208ENST00000580054 RPGRQ92834 1020 aaKnown RBP12.48□□□□□ -0.41
SMARCD2-208ENST00000580054 PHACTR3Q96KR7 559 aa12.48□□□□□ -0.41
SMARCD2-208ENST00000580054 UBN2Q6ZU65 1347 aa12.47□□□□□ -0.41
SMARCD2-208ENST00000580054 RGL2O15211 777 aa12.47□□□□□ -0.41
SMARCD2-208ENST00000580054 HOXA10P31260 410 aaPredicted RBP12.47□□□□□ -0.41
SMARCD2-208ENST00000580054 CXCL9Q07325 125 aa12.47□□□□□ -0.41
SMARCD2-208ENST00000580054 PRPF38BQ5VTL8 546 aaKnown RBP12.47□□□□□ -0.41
SMARCD2-208ENST00000580054 TAF1P21675 1872 aa12.46□□□□□ -0.41
SMARCD2-208ENST00000580054 KDM3BQ7LBC6 1761 aa12.46□□□□□ -0.41
SMARCD2-208ENST00000580054 KIF7Q2M1P5 1343 aa12.46□□□□□ -0.41
SMARCD2-208ENST00000580054 GPTP24298 496 aa12.46□□□□□ -0.41
SMARCD2-208ENST00000580054 PRKAR2BP31323 418 aa12.46□□□□□ -0.41
SMARCD2-208ENST00000580054 HUNKP57058 714 aa12.46□□□□□ -0.41
SMARCD2-208ENST00000580054 NOGQ13253 232 aa12.46□□□□□ -0.41
SMARCD2-208ENST00000580054 MCM10Q7L590 875 aa12.46□□□□□ -0.41
SMARCD2-208ENST00000580054 NGEFQ8N5V2 710 aa12.46□□□□□ -0.41
SMARCD2-208ENST00000580054 PGAP2Q9UHJ9 254 aa12.46□□□□□ -0.41
SMARCD2-208ENST00000580054 FAM155AB1AL88 458 aaPredicted RBP12.45□□□□□ -0.42
SMARCD2-208ENST00000580054 CRAMP1Q96RY5 1269 aa12.45□□□□□ -0.42
SMARCD2-208ENST00000580054 NYXQ9GZU5 481 aa12.45□□□□□ -0.42
SMARCD2-208ENST00000580054 IBTKQ9P2D0 1353 aaPredicted RBP12.44□□□□□ -0.42
SMARCD2-208ENST00000580054 DUOX1Q9NRD9 1551 aa12.44□□□□□ -0.42
SMARCD2-208ENST00000580054 RAD17O75943 681 aa12.44□□□□□ -0.42
SMARCD2-208ENST00000580054 CNGB1Q14028 1251 aaPredicted RBP12.44□□□□□ -0.42
SMARCD2-208ENST00000580054 DCTN1Q14203 1278 aa12.44□□□□□ -0.42
SMARCD2-208ENST00000580054 SUSD4Q5VX71 490 aa12.44□□□□□ -0.42
SMARCD2-208ENST00000580054 TTLL7Q6ZT98 887 aa12.44□□□□□ -0.42
SMARCD2-208ENST00000580054 RBM17Q96I25 401 aaKnown RBP12.44□□□□□ -0.42
SMARCD2-208ENST00000580054 RSPH6AQ9H0K4 717 aa12.44□□□□□ -0.42
SMARCD2-208ENST00000580054 ZNRF3Q9ULT6 936 aa12.44□□□□□ -0.42
SMARCD2-208ENST00000580054 MAP3K15Q6ZN16 1313 aa12.43□□□□□ -0.42
SMARCD2-208ENST00000580054 DLG5Q8TDM6 1919 aa12.43□□□□□ -0.42
SMARCD2-208ENST00000580054 NTSR2O95665 410 aa12.43□□□□□ -0.42
SMARCD2-208ENST00000580054 GRIPAP1Q4V328 841 aa12.43□□□□□ -0.42
SMARCD2-208ENST00000580054 CDC37L1Q7L3B6 337 aa12.43□□□□□ -0.42
SMARCD2-208ENST00000580054 USP48Q86UV5 1035 aa12.43□□□□□ -0.42
SMARCD2-208ENST00000580054 BCL2L13Q9BXK5 485 aa12.43□□□□□ -0.42
SMARCD2-208ENST00000580054 ANKRD36CQ5JPF3 1778 aa12.43□□□□□ -0.42
SMARCD2-208ENST00000580054 ABCC4O15439 1325 aa12.42□□□□□ -0.42
SMARCD2-208ENST00000580054 CDHR2Q9BYE9 1310 aa12.42□□□□□ -0.42
SMARCD2-208ENST00000580054 PER1O15534 1290 aaPredicted RBP12.42□□□□□ -0.42
SMARCD2-208ENST00000580054 KIF23Q02241 960 aaPredicted RBP12.42□□□□□ -0.42
SMARCD2-208ENST00000580054 ZC3H15Q8WU90 426 aaKnown RBP12.42□□□□□ -0.42
SMARCD2-208ENST00000580054 ZBTB3Q9H5J0 574 aa12.42□□□□□ -0.42
SMARCD2-208ENST00000580054 RNF186Q9NXI6 227 aa12.42□□□□□ -0.42
SMARCD2-208ENST00000580054 SAGE1Q9NXZ1 904 aa12.42□□□□□ -0.42
SMARCD2-208ENST00000580054 ATP6V0A2Q9Y487 856 aa12.42□□□□□ -0.42
SMARCD2-208ENST00000580054 LRRC37AA6NMS7 1700 aa12.42□□□□□ -0.42
SMARCD2-208ENST00000580054 YDJCA8MPS7 323 aa12.41□□□□□ -0.42
SMARCD2-208ENST00000580054 ERVV-1B6SEH8 477 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms