RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 KDF1Q8NAX2 398 aaPredicted RBP6.97□□□□□ -1.29
CDH8-206ENST00000580044 MADDQ8WXG6 1647 aa6.97□□□□□ -1.29
CDH8-206ENST00000580044 A2MP01023 1474 aa6.97□□□□□ -1.29
CDH8-206ENST00000580044 GPR25O00155 361 aa6.96□□□□□ -1.3
CDH8-206ENST00000580044 WASLO00401 505 aaPredicted RBP6.96□□□□□ -1.3
CDH8-206ENST00000580044 PIK3R2O00459 728 aa6.96□□□□□ -1.3
CDH8-206ENST00000580044 DBN1Q16643 649 aa6.96□□□□□ -1.3
CDH8-206ENST00000580044 DCAF11Q8TEB1 546 aa6.96□□□□□ -1.3
CDH8-206ENST00000580044 SIRT1Q96EB6 747 aa6.96□□□□□ -1.3
CDH8-206ENST00000580044 ARHGEF10LQ9HCE6 1279 aa6.96□□□□□ -1.3
CDH8-206ENST00000580044 LRRC4BQ9NT99 713 aa6.96□□□□□ -1.3
CDH8-206ENST00000580044 KDM5AP29375 1690 aaKnown RBP6.96□□□□□ -1.3
CDH8-206ENST00000580044 ARAP3Q8WWN8 1544 aa6.96□□□□□ -1.3
CDH8-206ENST00000580044 DEPDC5O75140 1603 aa6.95□□□□□ -1.3
CDH8-206ENST00000580044 SPATA31C2B4DYI2 1134 aa6.95□□□□□ -1.3
CDH8-206ENST00000580044 GSK3AP49840 483 aa6.95□□□□□ -1.3
CDH8-206ENST00000580044 TMEM214Q6NUQ4 689 aaKnown RBP6.95□□□□□ -1.3
CDH8-206ENST00000580044 GALNT6Q8NCL4 622 aa6.95□□□□□ -1.3
CDH8-206ENST00000580044 ZSCAN10Q96SZ4 725 aaPredicted RBP6.95□□□□□ -1.3
CDH8-206ENST00000580044 GRIP2Q9C0E4 1043 aa6.95□□□□□ -1.3
CDH8-206ENST00000580044 CUEDC1Q9NWM3 386 aaPredicted RBP6.95□□□□□ -1.3
CDH8-206ENST00000580044 CHD1O14646 1710 aa6.95□□□□□ -1.3
CDH8-206ENST00000580044 TRPM2O94759 1503 aa6.95□□□□□ -1.3
CDH8-206ENST00000580044 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.95□□□□□ -1.3
CDH8-206ENST00000580044 ABCC2Q92887 1545 aa6.95□□□□□ -1.3
CDH8-206ENST00000580044 EIF3AQ14152 1382 aaKnown RBP6.95□□□□□ -1.3
CDH8-206ENST00000580044 TET3O43151 1660 aa6.94□□□□□ -1.3
CDH8-206ENST00000580044 SOCS7O14512 581 aa6.94□□□□□ -1.3
CDH8-206ENST00000580044 MSTNO14793 375 aa6.94□□□□□ -1.3
CDH8-206ENST00000580044 PPM1GO15355 546 aaPredicted RBP6.94□□□□□ -1.3
CDH8-206ENST00000580044 TMF1P82094 1093 aa6.94□□□□□ -1.3
CDH8-206ENST00000580044 GAS6Q14393 721 aa6.94□□□□□ -1.3
CDH8-206ENST00000580044 CDCA8Q53HL2 280 aa6.94□□□□□ -1.3
CDH8-206ENST00000580044 EFHC2Q5JST6 749 aa6.94□□□□□ -1.3
CDH8-206ENST00000580044 CNKSR1Q969H4 720 aa6.94□□□□□ -1.3
CDH8-206ENST00000580044 ESYT1Q9BSJ8 1104 aa6.94□□□□□ -1.3
CDH8-206ENST00000580044 CFHR5Q9BXR6 569 aa6.94□□□□□ -1.3
CDH8-206ENST00000580044 MYOM1P52179 1685 aa6.93□□□□□ -1.3
CDH8-206ENST00000580044 ABCC1P33527 1531 aa6.93□□□□□ -1.3
CDH8-206ENST00000580044 A0A1B0GTH6 734 aa6.93□□□□□ -1.3
CDH8-206ENST00000580044 USP4Q13107 963 aa6.93□□□□□ -1.3
CDH8-206ENST00000580044 TPRNQ4KMQ1 711 aa6.93□□□□□ -1.3
CDH8-206ENST00000580044 GJD4Q96KN9 370 aaPredicted RBP6.93□□□□□ -1.3
CDH8-206ENST00000580044 NPC1L1Q9UHC9 1359 aa6.93□□□□□ -1.3
CDH8-206ENST00000580044 PIK3C2GO75747 1445 aa6.93□□□□□ -1.3
CDH8-206ENST00000580044 SCAPERQ9BY12 1400 aa6.93□□□□□ -1.3
CDH8-206ENST00000580044 ASXL1Q8IXJ9 1541 aa6.92□□□□□ -1.3
CDH8-206ENST00000580044 LBRQ14739 615 aaKnown RBP6.92□□□□□ -1.3
CDH8-206ENST00000580044 SLFNL1Q499Z3 407 aa6.92□□□□□ -1.3
CDH8-206ENST00000580044 NGEFQ8N5V2 710 aa6.92□□□□□ -1.3
CDH8-206ENST00000580044 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.92□□□□□ -1.3
CDH8-206ENST00000580044 OXCT2Q9BYC2 517 aaPredicted RBP6.92□□□□□ -1.3
CDH8-206ENST00000580044 BACH2Q9BYV9 841 aa6.92□□□□□ -1.3
CDH8-206ENST00000580044 RRAGCQ9HB90 399 aa6.92□□□□□ -1.3
CDH8-206ENST00000580044 GDF2Q9UK05 429 aaPredicted RBP6.92□□□□□ -1.3
CDH8-206ENST00000580044 PLA2R1Q13018 1463 aa6.92□□□□□ -1.3
CDH8-206ENST00000580044 AMPD1P23109 780 aa6.91□□□□□ -1.3
CDH8-206ENST00000580044 CENPCQ03188 943 aa6.91□□□□□ -1.3
CDH8-206ENST00000580044 ALYREFQ86V81 257 aaKnown RBP6.91□□□□□ -1.3
CDH8-206ENST00000580044 EXOC6Q8TAG9 804 aa6.91□□□□□ -1.3
CDH8-206ENST00000580044 GPAMQ9HCL2 828 aa6.91□□□□□ -1.3
CDH8-206ENST00000580044 RAB6BQ9NRW1 208 aa6.91□□□□□ -1.3
CDH8-206ENST00000580044 MKL2Q9ULH7 1088 aa6.91□□□□□ -1.3
CDH8-206ENST00000580044 KIF1BO60333 1816 aa6.91□□□□□ -1.3
CDH8-206ENST00000580044 NINLQ9Y2I6 1382 aa6.91□□□□□ -1.3
CDH8-206ENST00000580044 ZCCHC11Q5TAX3 1644 aaKnown RBP6.9□□□□□ -1.3
CDH8-206ENST00000580044 MYO3AQ8NEV4 1616 aa6.9□□□□□ -1.3
CDH8-206ENST00000580044 IFT172Q9UG01 1749 aa6.9□□□□□ -1.3
CDH8-206ENST00000580044 TRAK2O60296 914 aa6.9□□□□□ -1.3
CDH8-206ENST00000580044 SCTRP47872 440 aa6.9□□□□□ -1.3
CDH8-206ENST00000580044 CENPQQ7L2Z9 268 aaPredicted RBP6.9□□□□□ -1.3
CDH8-206ENST00000580044 OSBPL3Q9H4L5 887 aa6.9□□□□□ -1.3
CDH8-206ENST00000580044 CNTNAP5Q8WYK1 1306 aa6.9□□□□□ -1.3
CDH8-206ENST00000580044 DISP3Q9P2K9 1392 aa6.9□□□□□ -1.31
CDH8-206ENST00000580044 RTEL1-TNFRSF6BF6WH68 1400 aa6.9□□□□□ -1.31
CDH8-206ENST00000580044 SCAF11Q99590 1463 aaKnown RBP6.9□□□□□ -1.31
CDH8-206ENST00000580044 WDR7Q9Y4E6 1490 aa6.9□□□□□ -1.31
CDH8-206ENST00000580044 OIP5O43482 229 aa6.89□□□□□ -1.31
CDH8-206ENST00000580044 PHKA2P46019 1235 aa6.89□□□□□ -1.31
CDH8-206ENST00000580044 HNRNPMP52272 730 aaKnown RBP eCLIP6.89□□□□□ -1.31
CDH8-206ENST00000580044 ACDQ96AP0 544 aa6.89□□□□□ -1.31
CDH8-206ENST00000580044 TESK2Q96S53 571 aa6.89□□□□□ -1.31
CDH8-206ENST00000580044 CEP126Q9P2H0 1117 aa6.89□□□□□ -1.31
CDH8-206ENST00000580044 DOLKQ9UPQ8 538 aa6.89□□□□□ -1.31
CDH8-206ENST00000580044 UHRF1BP1LA0JNW5 1464 aa6.89□□□□□ -1.31
CDH8-206ENST00000580044 MYOM2P54296 1465 aa6.89□□□□□ -1.31
CDH8-206ENST00000580044 ZFYVE16Q7Z3T8 1539 aa6.89□□□□□ -1.31
CDH8-206ENST00000580044 INO80Q9ULG1 1556 aaPredicted RBP6.89□□□□□ -1.31
CDH8-206ENST00000580044 CLTCL1P53675 1640 aa6.89□□□□□ -1.31
CDH8-206ENST00000580044 USP32Q8NFA0 1604 aa6.88□□□□□ -1.31
CDH8-206ENST00000580044 PLCH2O75038 1416 aa6.88□□□□□ -1.31
CDH8-206ENST00000580044 BMP4P12644 408 aa6.88□□□□□ -1.31
CDH8-206ENST00000580044 PRKCSHP14314 528 aaPredicted RBP6.88□□□□□ -1.31
CDH8-206ENST00000580044 CNGB1Q14028 1251 aaPredicted RBP6.88□□□□□ -1.31
CDH8-206ENST00000580044 WDR43Q15061 677 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDH8-206ENST00000580044 FIGNL1Q6PIW4 674 aa6.88□□□□□ -1.31
CDH8-206ENST00000580044 GOLGA6L1Q8N7Z2 621 aa6.88□□□□□ -1.31
CDH8-206ENST00000580044 DCAF5Q96JK2 942 aa6.88□□□□□ -1.31
CDH8-206ENST00000580044 MAP3K4Q9Y6R4 1608 aa6.87□□□□□ -1.31
CDH8-206ENST00000580044 VWDEQ8N2E2 1590 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms