RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 CNGB1Q14028 1251 aaPredicted RBP4.59□□□□□ -1.67
CDH19-204ENST00000579658 CTU1Q7Z7A3 348 aaKnown RBP4.59□□□□□ -1.67
CDH19-204ENST00000579658 RTKN2Q8IZC4 609 aa4.59□□□□□ -1.67
CDH19-204ENST00000579658 PANK3Q9H999 370 aa4.59□□□□□ -1.67
CDH19-204ENST00000579658 SCN11AQ9UI33 1791 aa4.59□□□□□ -1.67
CDH19-204ENST00000579658 COL15A1P39059 1388 aa4.59□□□□□ -1.67
CDH19-204ENST00000579658 POTEJP0CG39 1038 aa4.59□□□□□ -1.67
CDH19-204ENST00000579658 IRX6P78412 446 aaPredicted RBP4.59□□□□□ -1.67
CDH19-204ENST00000579658 FKBP4Q02790 459 aaKnown RBP eCLIP4.59□□□□□ -1.67
CDH19-204ENST00000579658 MKRN3Q13064 507 aaKnown RBP4.59□□□□□ -1.67
CDH19-204ENST00000579658 AMOTQ4VCS5 1084 aa4.59□□□□□ -1.67
CDH19-204ENST00000579658 USHBP1Q8N6Y0 703 aa4.59□□□□□ -1.67
CDH19-204ENST00000579658 GGNBP2Q9H3C7 697 aa4.59□□□□□ -1.67
CDH19-204ENST00000579658 CACNA1SQ13698 1873 aa4.59□□□□□ -1.67
CDH19-204ENST00000579658 CDHR2Q9BYE9 1310 aa4.59□□□□□ -1.67
CDH19-204ENST00000579658 CASP8AP2Q9UKL3 1982 aa4.59□□□□□ -1.68
CDH19-204ENST00000579658 CARMIL3Q8ND23 1372 aa4.59□□□□□ -1.68
CDH19-204ENST00000579658 SPDYE2BA6NHP3 402 aa4.59□□□□□ -1.68
CDH19-204ENST00000579658 FYB1O15117 783 aa4.59□□□□□ -1.68
CDH19-204ENST00000579658 SPDYE6P0CI01 402 aa4.59□□□□□ -1.68
CDH19-204ENST00000579658 NFIXQ14938 502 aa4.59□□□□□ -1.68
CDH19-204ENST00000579658 SPDYE2Q495Y8 402 aa4.59□□□□□ -1.68
CDH19-204ENST00000579658 CC2D2BQ6DHV5 1058 aa4.59□□□□□ -1.68
CDH19-204ENST00000579658 IL27Q8NEV9 243 aa4.59□□□□□ -1.68
CDH19-204ENST00000579658 MASTLQ96GX5 879 aa4.59□□□□□ -1.68
CDH19-204ENST00000579658 SSUH2Q9Y2M2 353 aa4.59□□□□□ -1.68
CDH19-204ENST00000579658 FZD9O00144 591 aa4.58□□□□□ -1.68
CDH19-204ENST00000579658 SEMA3EO15041 775 aa4.58□□□□□ -1.68
CDH19-204ENST00000579658 C21orf2O43822 256 aa4.58□□□□□ -1.68
CDH19-204ENST00000579658 ZMYND10O75800 440 aa4.58□□□□□ -1.68
CDH19-204ENST00000579658 CABP4P57796 275 aa4.58□□□□□ -1.68
CDH19-204ENST00000579658 ST5P78524 1137 aa4.58□□□□□ -1.68
CDH19-204ENST00000579658 PLEKHO1Q53GL0 409 aaPredicted RBP4.58□□□□□ -1.68
CDH19-204ENST00000579658 NOM1Q5C9Z4 860 aaKnown RBP4.58□□□□□ -1.68
CDH19-204ENST00000579658 USPL1Q5W0Q7 1092 aa4.58□□□□□ -1.68
CDH19-204ENST00000579658 CYP4F22Q6NT55 531 aa4.58□□□□□ -1.68
CDH19-204ENST00000579658 ZNF622Q969S3 477 aaKnown RBP eCLIP4.58□□□□□ -1.68
CDH19-204ENST00000579658 SLC4A9Q96Q91 983 aa4.58□□□□□ -1.68
CDH19-204ENST00000579658 VPS33BQ9H267 617 aa4.58□□□□□ -1.68
CDH19-204ENST00000579658 SRP68Q9UHB9 627 aaKnown RBP4.58□□□□□ -1.68
CDH19-204ENST00000579658 SLX4Q8IY92 1834 aa4.58□□□□□ -1.68
CDH19-204ENST00000579658 MRC1P22897 1456 aa4.58□□□□□ -1.68
CDH19-204ENST00000579658 STK25O00506 426 aa4.58□□□□□ -1.68
CDH19-204ENST00000579658 EIF6P56537 245 aaKnown RBP4.58□□□□□ -1.68
CDH19-204ENST00000579658 SOX10P56693 466 aa4.58□□□□□ -1.68
CDH19-204ENST00000579658 CDCA8Q53HL2 280 aa4.58□□□□□ -1.68
CDH19-204ENST00000579658 CCDC102AQ96A19 550 aa4.58□□□□□ -1.68
CDH19-204ENST00000579658 UBR2Q8IWV8 1755 aa4.57□□□□□ -1.68
CDH19-204ENST00000579658 PER1O15534 1290 aaPredicted RBP4.57□□□□□ -1.68
CDH19-204ENST00000579658 MAP1SQ66K74 1059 aaPredicted RBP4.57□□□□□ -1.68
CDH19-204ENST00000579658 INTS5Q6P9B9 1019 aaKnown RBP4.57□□□□□ -1.68
CDH19-204ENST00000579658 SAPCD2Q86UD0 394 aa4.57□□□□□ -1.68
CDH19-204ENST00000579658 PSMD1Q99460 953 aa4.57□□□□□ -1.68
CDH19-204ENST00000579658 APBB1O00213 710 aa4.57□□□□□ -1.68
CDH19-204ENST00000579658 RIOK3O14730 519 aaKnown RBP4.57□□□□□ -1.68
CDH19-204ENST00000579658 IARSP41252 1262 aaKnown RBP4.57□□□□□ -1.68
CDH19-204ENST00000579658 TNNT2P45379 298 aaPredicted RBP4.57□□□□□ -1.68
CDH19-204ENST00000579658 HSP90AB2PQ58FF8 381 aa4.57□□□□□ -1.68
CDH19-204ENST00000579658 INTS3Q68E01 1043 aaKnown RBP4.57□□□□□ -1.68
CDH19-204ENST00000579658 BICDL1Q6ZP65 573 aa4.57□□□□□ -1.68
CDH19-204ENST00000579658 JDP2Q8WYK2 163 aa4.57□□□□□ -1.68
CDH19-204ENST00000579658 IGSF5Q9NSI5 407 aa4.57□□□□□ -1.68
CDH19-204ENST00000579658 ZNF541Q9H0D2 1346 aa4.56□□□□□ -1.68
CDH19-204ENST00000579658 DLL1O00548 723 aa4.56□□□□□ -1.68
CDH19-204ENST00000579658 NPR1P16066 1061 aa4.56□□□□□ -1.68
CDH19-204ENST00000579658 DDX10Q13206 875 aaKnown RBP4.56□□□□□ -1.68
CDH19-204ENST00000579658 RRS1Q15050 365 aaKnown RBP4.56□□□□□ -1.68
CDH19-204ENST00000579658 PRPF40BQ6NWY9 871 aaKnown RBP4.56□□□□□ -1.68
CDH19-204ENST00000579658 YTHDC1Q96MU7 727 aaKnown RBP4.56□□□□□ -1.68
CDH19-204ENST00000579658 PGAP2Q9UHJ9 254 aa4.56□□□□□ -1.68
CDH19-204ENST00000579658 PITPNM2Q9BZ72 1349 aa4.56□□□□□ -1.68
CDH19-204ENST00000579658 AOC2O75106 756 aa4.56□□□□□ -1.68
CDH19-204ENST00000579658 SRGNP10124 158 aa4.56□□□□□ -1.68
CDH19-204ENST00000579658 MNX1P50219 401 aaPredicted RBP4.56□□□□□ -1.68
CDH19-204ENST00000579658 FXR1P51114 621 aaKnown RBP eCLIP4.56□□□□□ -1.68
CDH19-204ENST00000579658 C1orf141Q5JVX7 400 aa4.56□□□□□ -1.68
CDH19-204ENST00000579658 CC2D1BQ5T0F9 858 aaKnown RBP4.56□□□□□ -1.68
CDH19-204ENST00000579658 CIAPIN1Q6FI81 312 aa4.56□□□□□ -1.68
CDH19-204ENST00000579658 TEX13AQ9BXU3 409 aaPredicted RBP4.56□□□□□ -1.68
CDH19-204ENST00000579658 ADARB2Q9NS39 739 aaKnown RBP4.56□□□□□ -1.68
CDH19-204ENST00000579658 HPS5Q9UPZ3 1129 aa4.56□□□□□ -1.68
CDH19-204ENST00000579658 ALDH1B1P30837 517 aa4.55□□□□□ -1.68
CDH19-204ENST00000579658 CST9Q5W186 159 aa4.55□□□□□ -1.68
CDH19-204ENST00000579658 CNBD1Q8NA66 436 aa4.55□□□□□ -1.68
CDH19-204ENST00000579658 C7orf43Q8WVR3 580 aa4.55□□□□□ -1.68
CDH19-204ENST00000579658 EMILIN1Q9Y6C2 1016 aa4.55□□□□□ -1.68
CDH19-204ENST00000579658 TESPA1A2RU30 521 aaPredicted RBP4.55□□□□□ -1.68
CDH19-204ENST00000579658 CELF2O95319 508 aaKnown RBP4.55□□□□□ -1.68
CDH19-204ENST00000579658 CYP19A1P11511 503 aaPredicted RBP4.55□□□□□ -1.68
CDH19-204ENST00000579658 RIC1Q4ADV7 1423 aa4.55□□□□□ -1.68
CDH19-204ENST00000579658 RNF123Q5XPI4 1314 aa4.55□□□□□ -1.68
CDH19-204ENST00000579658 PRR5LQ6MZQ0 368 aa4.55□□□□□ -1.68
CDH19-204ENST00000579658 FBXO46Q6PJ61 603 aaPredicted RBP4.55□□□□□ -1.68
CDH19-204ENST00000579658 EYA1Q99502 592 aa4.55□□□□□ -1.68
CDH19-204ENST00000579658 METRNQ9UJH8 293 aa4.55□□□□□ -1.68
CDH19-204ENST00000579658 KLRG2A4D1S0 409 aaPredicted RBP4.54□□□□□ -1.68
CDH19-204ENST00000579658 STARD3NLO95772 234 aa4.54□□□□□ -1.68
CDH19-204ENST00000579658 ZNF530Q6P9A1 599 aaPredicted RBP4.54□□□□□ -1.68
CDH19-204ENST00000579658 CDC37L1Q7L3B6 337 aa4.54□□□□□ -1.68
CDH19-204ENST00000579658 BCL2L12Q9HB09 334 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms