RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 ZFYVE27Q5T4F4 411 aa11.96□□□□□ -0.5
MSI2-209ENST00000579483 PPP1R12BO60237 982 aaPredicted RBP11.95□□□□□ -0.5
MSI2-209ENST00000579483 SH2D4AQ9H788 454 aa11.95□□□□□ -0.5
MSI2-209ENST00000579483 IFIT3O14879 490 aaKnown RBP11.95□□□□□ -0.5
MSI2-209ENST00000579483 ZNF790Q6PG37 636 aa11.95□□□□□ -0.5
MSI2-209ENST00000579483 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
MSI2-209ENST00000579483 SSBP05455 408 aaKnown RBP eCLIP11.95□□□□□ -0.5
MSI2-209ENST00000579483 GNAQP50148 359 aa11.95□□□□□ -0.5
MSI2-209ENST00000579483 STK3Q13188 491 aa11.95□□□□□ -0.5
MSI2-209ENST00000579483 MFSD6Q6ZSS7 791 aa11.95□□□□□ -0.5
MSI2-209ENST00000579483 SMARCE1Q969G3 411 aa11.95□□□□□ -0.5
MSI2-209ENST00000579483 GOLIM4O00461 696 aa11.95□□□□□ -0.5
MSI2-209ENST00000579483 GNAT2P19087 354 aa11.95□□□□□ -0.5
MSI2-209ENST00000579483 MATR3P43243 847 aaKnown RBP eCLIP11.95□□□□□ -0.52e-7■■■■□ 25.5
MSI2-209ENST00000579483 TMTC2Q8N394 836 aa11.95□□□□□ -0.5
MSI2-209ENST00000579483 NAP1L1P55209 391 aaKnown RBP11.94□□□□□ -0.5
MSI2-209ENST00000579483 GPR162Q16538 588 aa11.94□□□□□ -0.5
MSI2-209ENST00000579483 KIF20AO95235 890 aa11.94□□□□□ -0.5
MSI2-209ENST00000579483 HMGN5P82970 282 aaKnown RBP11.94□□□□□ -0.5
MSI2-209ENST00000579483 CYP7A1P22680 504 aa11.94□□□□□ -0.5
MSI2-209ENST00000579483 PLBD2Q8NHP8 589 aa11.94□□□□□ -0.5
MSI2-209ENST00000579483 CNNM2Q9H8M5 875 aa11.94□□□□□ -0.5
MSI2-209ENST00000579483 VEZTQ9HBM0 779 aa11.94□□□□□ -0.5
MSI2-209ENST00000579483 SH2B1Q9NRF2 756 aaPredicted RBP11.94□□□□□ -0.5
MSI2-209ENST00000579483 SMC2O95347 1197 aa11.94□□□□□ -0.5
MSI2-209ENST00000579483 KRT23Q9C075 422 aa11.94□□□□□ -0.5
MSI2-209ENST00000579483 SLC52A2Q9HAB3 445 aa11.94□□□□□ -0.5
MSI2-209ENST00000579483 ZCCHC11Q5TAX3 1644 aaKnown RBP11.94□□□□□ -0.5
MSI2-209ENST00000579483 HECW2Q9P2P5 1572 aa11.93□□□□□ -0.5
MSI2-209ENST00000579483 CCDC194A0A1B0GVG4 234 aa11.93□□□□□ -0.5
MSI2-209ENST00000579483 DPY19L2Q6NUT2 758 aa11.93□□□□□ -0.5
MSI2-209ENST00000579483 NLGN1Q8N2Q7 840 aa11.93□□□□□ -0.5
MSI2-209ENST00000579483 HMG20BQ9P0W2 317 aa11.93□□□□□ -0.5
MSI2-209ENST00000579483 ME1P48163 572 aa11.93□□□□□ -0.5
MSI2-209ENST00000579483 CCDC39Q9UFE4 941 aa11.93□□□□□ -0.5
MSI2-209ENST00000579483 CCDC191Q8NCU4 936 aa11.93□□□□□ -0.5
MSI2-209ENST00000579483 RIMBP3CA6NJZ7 1639 aa11.93□□□□□ -0.5
MSI2-209ENST00000579483 RIMBP3BA6NNM3 1639 aa11.93□□□□□ -0.5
MSI2-209ENST00000579483 ANXA1P04083 346 aa11.93□□□□□ -0.5
MSI2-209ENST00000579483 TRIM27P14373 513 aa11.93□□□□□ -0.5
MSI2-209ENST00000579483 CEP57L1Q8IYX8 460 aa11.93□□□□□ -0.5
MSI2-209ENST00000579483 RIMBP3Q9UFD9 1639 aa11.93□□□□□ -0.5
MSI2-209ENST00000579483 GGA1Q9UJY5 639 aa11.93□□□□□ -0.5
MSI2-209ENST00000579483 FBLN1P23142 703 aa11.92□□□□□ -0.5
MSI2-209ENST00000579483 TESK2Q96S53 571 aa11.92□□□□□ -0.5
MSI2-209ENST00000579483 ZNHIT6Q9NWK9 470 aaKnown RBP11.92□□□□□ -0.5
MSI2-209ENST00000579483 DENND2AQ9ULE3 1009 aa11.92□□□□□ -0.5
MSI2-209ENST00000579483 LDHBP07195 334 aaKnown RBP11.92□□□□□ -0.5
MSI2-209ENST00000579483 LARGE2Q8N3Y3 721 aa11.92□□□□□ -0.5
MSI2-209ENST00000579483 NPC1L1Q9UHC9 1359 aa11.92□□□□□ -0.5
MSI2-209ENST00000579483 MYCNP04198 464 aaPredicted RBP11.92□□□□□ -0.5
MSI2-209ENST00000579483 TTC6Q86TZ1 520 aa11.92□□□□□ -0.5
MSI2-209ENST00000579483 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.92□□□□□ -0.5
MSI2-209ENST00000579483 GRM1Q13255 1194 aa11.92□□□□□ -0.5
MSI2-209ENST00000579483 KRT27Q7Z3Y8 459 aa11.92□□□□□ -0.5
MSI2-209ENST00000579483 ESR2Q92731 530 aa11.92□□□□□ -0.5
MSI2-209ENST00000579483 NIM1KQ8IY84 436 aa11.91□□□□□ -0.5
MSI2-209ENST00000579483 GOLGA8AA7E2F4 631 aa11.91□□□□□ -0.5
MSI2-209ENST00000579483 GOLGA8BA8MQT2 603 aa11.91□□□□□ -0.5
MSI2-209ENST00000579483 TSPY3P0CV98 308 aa11.91□□□□□ -0.5
MSI2-209ENST00000579483 TSPY8P0CW00 308 aa11.91□□□□□ -0.5
MSI2-209ENST00000579483 CASTP20810 708 aaKnown RBP11.91□□□□□ -0.5
MSI2-209ENST00000579483 SSRP1Q08945 709 aaKnown RBP11.91□□□□□ -0.5
MSI2-209ENST00000579483 DPP8Q6V1X1 898 aaPredicted RBP11.91□□□□□ -0.5
MSI2-209ENST00000579483 NCOA7Q8NI08 942 aa11.91□□□□□ -0.5
MSI2-209ENST00000579483 CARD10Q9BWT7 1032 aa11.91□□□□□ -0.5
MSI2-209ENST00000579483 GJA3Q9Y6H8 435 aa11.91□□□□□ -0.5
MSI2-209ENST00000579483 PDE8AO60658 829 aa11.91□□□□□ -0.5
MSI2-209ENST00000579483 POTEJP0CG39 1038 aa11.91□□□□□ -0.5
MSI2-209ENST00000579483 THRAP3Q9Y2W1 955 aaKnown RBP11.91□□□□□ -0.5
MSI2-209ENST00000579483 PZPP20742 1482 aa11.91□□□□□ -0.5
MSI2-209ENST00000579483 RHPN1Q8TCX5 695 aa11.91□□□□□ -0.5
MSI2-209ENST00000579483 RBM27Q9P2N5 1060 aaKnown RBP11.91□□□□□ -0.5
MSI2-209ENST00000579483 PRPF40BQ6NWY9 871 aaKnown RBP11.9□□□□□ -0.5
MSI2-209ENST00000579483 SNRKQ9NRH2 765 aa11.9□□□□□ -0.5
MSI2-209ENST00000579483 MYO6Q9UM54 1294 aa11.9□□□□□ -0.5
MSI2-209ENST00000579483 F8W031 263 aaPredicted RBP11.9□□□□□ -0.5
MSI2-209ENST00000579483 RBM26Q5T8P6 1007 aaKnown RBP11.9□□□□□ -0.5
MSI2-209ENST00000579483 NLRP5P59047 1200 aa11.9□□□□□ -0.5
MSI2-209ENST00000579483 CNKSR1Q969H4 720 aa11.9□□□□□ -0.5
MSI2-209ENST00000579483 K7ELQ4 463 aaPredicted RBP11.9□□□□□ -0.5
MSI2-209ENST00000579483 UFL1O94874 794 aa11.9□□□□□ -0.5
MSI2-209ENST00000579483 PIBF1Q8WXW3 757 aa11.9□□□□□ -0.5
MSI2-209ENST00000579483 PYM1Q9BRP8 204 aaKnown RBP11.9□□□□□ -0.5
MSI2-209ENST00000579483 KDM5CP41229 1560 aa11.9□□□□□ -0.51
MSI2-209ENST00000579483 TSPOAP1O95153 1857 aa11.89□□□□□ -0.51
MSI2-209ENST00000579483 SAMD9LQ8IVG5 1584 aa11.89□□□□□ -0.51
MSI2-209ENST00000579483 CHMP4BP1P59074 171 aa11.89□□□□□ -0.51
MSI2-209ENST00000579483 STXBP4Q6ZWJ1 553 aa11.89□□□□□ -0.51
MSI2-209ENST00000579483 PLXNC1O60486 1568 aa11.89□□□□□ -0.51
MSI2-209ENST00000579483 GPS2Q13227 327 aa11.89□□□□□ -0.51
MSI2-209ENST00000579483 TMEM67Q5HYA8 995 aa11.89□□□□□ -0.51
MSI2-209ENST00000579483 HOMER1Q86YM7 354 aa11.89□□□□□ -0.51
MSI2-209ENST00000579483 KAT6BQ8WYB5 2073 aa11.89□□□□□ -0.51
MSI2-209ENST00000579483 UNC5CLQ8IV45 518 aa11.89□□□□□ -0.51
MSI2-209ENST00000579483 ERBB4Q15303 1308 aa11.89□□□□□ -0.51
MSI2-209ENST00000579483 ERVK-7P63135 1459 aa11.89□□□□□ -0.51
MSI2-209ENST00000579483 ATP8B2P98198 1209 aa11.89□□□□□ -0.51
MSI2-209ENST00000579483 HSP90AA2PQ14568 343 aaPredicted RBP11.89□□□□□ -0.51
MSI2-209ENST00000579483 H7C1D1 291 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms