RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 NLRP10Q86W26 655 aa17.4■□□□□ 0.38
TSEN54-206ENST00000579449 JARID2Q92833 1246 aaPredicted RBP17.4■□□□□ 0.38
TSEN54-206ENST00000579449 BCL2L12Q9HB09 334 aa17.4■□□□□ 0.38
TSEN54-206ENST00000579449 LRRFIP2Q9Y608 721 aaKnown RBP17.4■□□□□ 0.38
TSEN54-206ENST00000579449 USP42Q9H9J4 1324 aaKnown RBP17.4■□□□□ 0.38
TSEN54-206ENST00000579449 H7C1W4 665 aa17.39■□□□□ 0.37
TSEN54-206ENST00000579449 UBN2Q6ZU65 1347 aa17.39■□□□□ 0.37
TSEN54-206ENST00000579449 CASP7P55210 303 aa17.38■□□□□ 0.37
TSEN54-206ENST00000579449 CEP85Q6P2H3 762 aa17.38■□□□□ 0.37
TSEN54-206ENST00000579449 UBE3BQ7Z3V4 1068 aa17.38■□□□□ 0.37
TSEN54-206ENST00000579449 SUCLG2Q96I99 432 aa17.38■□□□□ 0.37
TSEN54-206ENST00000579449 ANO8Q9HCE9 1232 aaPredicted RBP17.38■□□□□ 0.37
TSEN54-206ENST00000579449 HDAC5Q9UQL6 1122 aa17.38■□□□□ 0.37
TSEN54-206ENST00000579449 NIP7Q9Y221 180 aaKnown RBP eCLIP17.38■□□□□ 0.37
TSEN54-206ENST00000579449 IGHDP01880 384 aa17.37■□□□□ 0.37
TSEN54-206ENST00000579449 PCCAP05165 728 aaPredicted RBP17.37■□□□□ 0.37
TSEN54-206ENST00000579449 TBC1D9BQ66K14 1250 aa17.37■□□□□ 0.37
TSEN54-206ENST00000579449 SIRT2Q8IXJ6 389 aa17.37■□□□□ 0.37
TSEN54-206ENST00000579449 ANKRD44Q8N8A2 993 aa17.37■□□□□ 0.37
TSEN54-206ENST00000579449 UPF1Q92900 1129 aaKnown RBP eCLIP17.37■□□□□ 0.37
TSEN54-206ENST00000579449 STK32BQ9NY57 414 aa17.37■□□□□ 0.37
TSEN54-206ENST00000579449 QSER1Q2KHR3 1735 aa17.36■□□□□ 0.37
TSEN54-206ENST00000579449 SLC15A2Q16348 729 aa17.36■□□□□ 0.37
TSEN54-206ENST00000579449 PARP10Q53GL7 1025 aa17.36■□□□□ 0.37
TSEN54-206ENST00000579449 RTL5Q5HYW3 569 aaPredicted RBP17.36■□□□□ 0.37
TSEN54-206ENST00000579449 SUSD4Q5VX71 490 aa17.36■□□□□ 0.37
TSEN54-206ENST00000579449 COL23A1Q86Y22 540 aaPredicted RBP17.36■□□□□ 0.37
TSEN54-206ENST00000579449 RPAP2Q8IXW5 612 aaPredicted RBP17.36■□□□□ 0.37
TSEN54-206ENST00000579449 ZBTB38Q8NAP3 1195 aaPredicted RBP17.36■□□□□ 0.37
TSEN54-206ENST00000579449 FLAD1Q8NFF5 587 aa17.36■□□□□ 0.37
TSEN54-206ENST00000579449 RWDD1Q9H446 243 aaPredicted RBP17.36■□□□□ 0.37
TSEN54-206ENST00000579449 ATP8B2P98198 1209 aa17.35■□□□□ 0.37
TSEN54-206ENST00000579449 HDAC1Q13547 482 aaPredicted RBP17.35■□□□□ 0.37
TSEN54-206ENST00000579449 BICDL1Q6ZP65 573 aa17.35■□□□□ 0.37
TSEN54-206ENST00000579449 KAZALD1Q96I82 304 aa17.35■□□□□ 0.37
TSEN54-206ENST00000579449 TRMT112Q9UI30 125 aaKnown RBP17.35■□□□□ 0.37
TSEN54-206ENST00000579449 PNPLA7Q6ZV29 1317 aa17.35■□□□□ 0.37
TSEN54-206ENST00000579449 FAM177BA6PVY3 158 aa17.34■□□□□ 0.37
TSEN54-206ENST00000579449 GYS1P13807 737 aa17.34■□□□□ 0.37
TSEN54-206ENST00000579449 COL24A1Q17RW2 1714 aa17.34■□□□□ 0.37
TSEN54-206ENST00000579449 PPP1R42Q7Z4L9 355 aa17.34■□□□□ 0.37
TSEN54-206ENST00000579449 KDM2BQ8NHM5 1336 aa17.34■□□□□ 0.37
TSEN54-206ENST00000579449 FAM89AQ96GI7 184 aa17.34■□□□□ 0.37
TSEN54-206ENST00000579449 UTP14AQ9BVJ6 771 aaKnown RBP17.34■□□□□ 0.37
TSEN54-206ENST00000579449 BICC1Q9H694 974 aaKnown RBP17.34■□□□□ 0.37
TSEN54-206ENST00000579449 MSH5O43196 834 aa17.33■□□□□ 0.36
TSEN54-206ENST00000579449 EPHA10Q5JZY3 1008 aa17.33■□□□□ 0.36
TSEN54-206ENST00000579449 SYNE4Q8N205 404 aa17.33■□□□□ 0.36
TSEN54-206ENST00000579449 SETDB2Q96T68 719 aa17.33■□□□□ 0.36
TSEN54-206ENST00000579449 CDHR2Q9BYE9 1310 aa17.32■□□□□ 0.36
TSEN54-206ENST00000579449 MYH3P11055 1940 aa17.32■□□□□ 0.36
TSEN54-206ENST00000579449 PNMA6EA0A0J9YXQ4 647 aa17.32■□□□□ 0.36
TSEN54-206ENST00000579449 NTSR2O95665 410 aa17.32■□□□□ 0.36
TSEN54-206ENST00000579449 CENPQQ7L2Z9 268 aaPredicted RBP17.32■□□□□ 0.36
TSEN54-206ENST00000579449 HMMRO75330 724 aa17.31■□□□□ 0.36
TSEN54-206ENST00000579449 FOXO4P98177 505 aa17.31■□□□□ 0.36
TSEN54-206ENST00000579449 MTX1Q13505 466 aa17.31■□□□□ 0.36
TSEN54-206ENST00000579449 NFIXQ14938 502 aa17.31■□□□□ 0.36
TSEN54-206ENST00000579449 SH3TC1Q8TE82 1336 aa17.3■□□□□ 0.36
TSEN54-206ENST00000579449 IRS4O14654 1257 aaPredicted RBP17.3■□□□□ 0.36
TSEN54-206ENST00000579449 POLA2Q14181 598 aa17.3■□□□□ 0.36
TSEN54-206ENST00000579449 ILDR2Q71H61 639 aa17.3■□□□□ 0.36
TSEN54-206ENST00000579449 PLA2G12BQ9BX93 195 aa17.3■□□□□ 0.36
TSEN54-206ENST00000579449 DDX60Q8IY21 1712 aaKnown RBP17.3■□□□□ 0.36
TSEN54-206ENST00000579449 SRGAP3O43295 1099 aa17.29■□□□□ 0.36
TSEN54-206ENST00000579449 RABL6Q3YEC7 729 aaPredicted RBP17.29■□□□□ 0.36
TSEN54-206ENST00000579449 NUTM1Q86Y26 1132 aa17.29■□□□□ 0.36
TSEN54-206ENST00000579449 SSH3Q8TE77 659 aa17.29■□□□□ 0.36
TSEN54-206ENST00000579449 NYXQ9GZU5 481 aa17.29■□□□□ 0.36
TSEN54-206ENST00000579449 LAMB2P55268 1798 aa17.29■□□□□ 0.36
TSEN54-206ENST00000579449 CARMIL3Q8ND23 1372 aa17.28■□□□□ 0.36
TSEN54-206ENST00000579449 TM4SF1P30408 202 aa17.28■□□□□ 0.36
TSEN54-206ENST00000579449 LMBR1LQ6UX01 489 aa17.28■□□□□ 0.36
TSEN54-206ENST00000579449 NBPF5PQ86XG9 351 aaPredicted RBP17.28■□□□□ 0.36
TSEN54-206ENST00000579449 PDE8AO60658 829 aa17.27■□□□□ 0.36
TSEN54-206ENST00000579449 HCLS1P14317 486 aaPredicted RBP17.27■□□□□ 0.36
TSEN54-206ENST00000579449 ERFEQ4G0M1 354 aa17.27■□□□□ 0.36
TSEN54-206ENST00000579449 SMC5Q8IY18 1101 aa17.27■□□□□ 0.36
TSEN54-206ENST00000579449 NLGN1Q8N2Q7 840 aa17.27■□□□□ 0.36
TSEN54-206ENST00000579449 DCTPP1Q9H773 170 aa17.27■□□□□ 0.36
TSEN54-206ENST00000579449 CASZ1Q86V15 1759 aa17.26■□□□□ 0.35
TSEN54-206ENST00000579449 NPM3O75607 178 aaKnown RBP17.26■□□□□ 0.35
TSEN54-206ENST00000579449 TPTE2Q6XPS3 522 aa17.26■□□□□ 0.35
TSEN54-206ENST00000579449 GCC1Q96CN9 775 aa17.26■□□□□ 0.35
TSEN54-206ENST00000579449 CHMP3Q9Y3E7 222 aa17.26■□□□□ 0.35
TSEN54-206ENST00000579449 CSF1RP07333 972 aa17.25■□□□□ 0.35
TSEN54-206ENST00000579449 HSP90B1P14625 803 aaKnown RBP17.25■□□□□ 0.35
TSEN54-206ENST00000579449 GTF2E1P29083 439 aaPredicted RBP17.25■□□□□ 0.35
TSEN54-206ENST00000579449 CTSWP56202 376 aa17.25■□□□□ 0.35
TSEN54-206ENST00000579449 DDR1Q08345 913 aa17.25■□□□□ 0.35
TSEN54-206ENST00000579449 POLRMTO00411 1230 aaKnown RBP17.24■□□□□ 0.35
TSEN54-206ENST00000579449 SERPINB2P05120 415 aa17.24■□□□□ 0.35
TSEN54-206ENST00000579449 SLC10A5Q5PT55 438 aa17.24■□□□□ 0.35
TSEN54-206ENST00000579449 MSL1Q68DK7 614 aa17.24■□□□□ 0.35
TSEN54-206ENST00000579449 TTLL11Q8NHH1 800 aa17.24■□□□□ 0.35
TSEN54-206ENST00000579449 ABCC12Q96J65 1359 aa17.24■□□□□ 0.35
TSEN54-206ENST00000579449 NPHP1O15259 732 aa17.23■□□□□ 0.35
TSEN54-206ENST00000579449 RFX5P48382 616 aaPredicted RBP17.23■□□□□ 0.35
TSEN54-206ENST00000579449 CCDC24Q8N4L8 307 aa17.23■□□□□ 0.35
TSEN54-206ENST00000579449 CCDC85AQ96PX6 553 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms