RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 EIF5P55010 431 aaKnown RBP24.89■■□□□ 1.58
SMG8-203ENST00000578922 HSP90AB4PQ58FF6 505 aa24.89■■□□□ 1.58
SMG8-203ENST00000578922 CHMP3Q9Y3E7 222 aa24.88■■□□□ 1.57
SMG8-203ENST00000578922 LMBR1LQ6UX01 489 aa24.88■■□□□ 1.57
SMG8-203ENST00000578922 LINC00116Q8NCU8 138 aa24.88■■□□□ 1.57
SMG8-203ENST00000578922 TBC1D32Q96NH3 1257 aa24.88■■□□□ 1.57
SMG8-203ENST00000578922 MX1P20591 662 aa24.87■■□□□ 1.57
SMG8-203ENST00000578922 MYH14Q7Z406 1995 aaKnown RBP24.87■■□□□ 1.57
SMG8-203ENST00000578922 BTAF1O14981 1849 aa24.87■■□□□ 1.57
SMG8-203ENST00000578922 FOXO4P98177 505 aa24.86■■□□□ 1.57
SMG8-203ENST00000578922 FAM89AQ96GI7 184 aa24.86■■□□□ 1.57
SMG8-203ENST00000578922 SALL3Q9BXA9 1300 aa24.86■■□□□ 1.57
SMG8-203ENST00000578922 MFAP1P55081 439 aaKnown RBP24.86■■□□□ 1.57
SMG8-203ENST00000578922 G3BP1Q13283 466 aaKnown RBP eCLIP24.86■■□□□ 1.575e-6■■□□□ 11.9
SMG8-203ENST00000578922 RABL6Q3YEC7 729 aaPredicted RBP24.86■■□□□ 1.57
SMG8-203ENST00000578922 EP400Q96L91 3159 aa24.85■■□□□ 1.57
SMG8-203ENST00000578922 NHSQ6T4R5 1651 aa24.85■■□□□ 1.57
SMG8-203ENST00000578922 TRIM28Q13263 835 aaKnown RBP24.84■■□□□ 1.57
SMG8-203ENST00000578922 SMIM5Q71RC9 77 aa24.84■■□□□ 1.57
SMG8-203ENST00000578922 SYNE4Q8N205 404 aa24.84■■□□□ 1.57
SMG8-203ENST00000578922 COL15A1P39059 1388 aa24.84■■□□□ 1.57
SMG8-203ENST00000578922 FRAT2O75474 233 aaPredicted RBP24.83■■□□□ 1.57
SMG8-203ENST00000578922 SDSP20132 328 aa24.83■■□□□ 1.57
SMG8-203ENST00000578922 HSP90AB3PQ58FF7 597 aa24.83■■□□□ 1.57
SMG8-203ENST00000578922 NLRP10Q86W26 655 aa24.83■■□□□ 1.57
SMG8-203ENST00000578922 OSBPL3Q9H4L5 887 aa24.83■■□□□ 1.57
SMG8-203ENST00000578922 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.83■■□□□ 1.57
SMG8-203ENST00000578922 ERVV-1B6SEH8 477 aa24.83■■□□□ 1.56
SMG8-203ENST00000578922 RFX5P48382 616 aaPredicted RBP24.83■■□□□ 1.56
SMG8-203ENST00000578922 TBC1D9Q6ZT07 1266 aa24.83■■□□□ 1.56
SMG8-203ENST00000578922 SASH1O94885 1247 aa24.82■■□□□ 1.56
SMG8-203ENST00000578922 ERC1Q8IUD2 1116 aa24.82■■□□□ 1.56
SMG8-203ENST00000578922 PTPN12Q05209 780 aaKnown RBP24.81■■□□□ 1.56
SMG8-203ENST00000578922 CCNL1Q9UK58 526 aaPredicted RBP24.81■■□□□ 1.56
SMG8-203ENST00000578922 NUP98P52948 1817 aa24.81■■□□□ 1.56
SMG8-203ENST00000578922 PCCAP05165 728 aaPredicted RBP24.81■■□□□ 1.56
SMG8-203ENST00000578922 ZBTB38Q8NAP3 1195 aaPredicted RBP24.81■■□□□ 1.56
SMG8-203ENST00000578922 CCDC85AQ96PX6 553 aaPredicted RBP24.81■■□□□ 1.56
SMG8-203ENST00000578922 COL5A3P25940 1745 aaPredicted RBP24.81■■□□□ 1.56
SMG8-203ENST00000578922 CDC45O75419 566 aa24.8■■□□□ 1.56
SMG8-203ENST00000578922 CLASRPQ8N2M8 674 aaKnown RBP24.8■■□□□ 1.56
SMG8-203ENST00000578922 CICQ96RK0 1608 aaPredicted RBP24.8■■□□□ 1.56
SMG8-203ENST00000578922 UBN2Q6ZU65 1347 aa24.8■■□□□ 1.56
SMG8-203ENST00000578922 FAM177BA6PVY3 158 aa24.8■■□□□ 1.56
SMG8-203ENST00000578922 CAMTA2O94983 1202 aa24.79■■□□□ 1.56
SMG8-203ENST00000578922 KRT27Q7Z3Y8 459 aa24.79■■□□□ 1.56
SMG8-203ENST00000578922 COPRSQ9NQ92 184 aa24.79■■□□□ 1.56
SMG8-203ENST00000578922 TRMT112Q9UI30 125 aaKnown RBP24.79■■□□□ 1.56
SMG8-203ENST00000578922 SBF2Q86WG5 1849 aa24.79■■□□□ 1.56
SMG8-203ENST00000578922 RREB1Q92766 1687 aa24.79■■□□□ 1.56
SMG8-203ENST00000578922 STAP2Q9UGK3 403 aa24.78■■□□□ 1.56
SMG8-203ENST00000578922 AACSQ86V21 672 aa24.78■■□□□ 1.56
SMG8-203ENST00000578922 ZNF34Q8IZ26 560 aa24.77■■□□□ 1.56
SMG8-203ENST00000578922 ZNF594Q96JF6 807 aaPredicted RBP24.77■■□□□ 1.56
SMG8-203ENST00000578922 BRWD3Q6RI45 1802 aa24.77■■□□□ 1.56
SMG8-203ENST00000578922 ANKRD36CQ5JPF3 1778 aa24.76■■□□□ 1.55
SMG8-203ENST00000578922 TRIM6-TRIM34B2RNG4 842 aa24.76■■□□□ 1.55
SMG8-203ENST00000578922 IFIT2P09913 472 aaKnown RBP24.76■■□□□ 1.55
SMG8-203ENST00000578922 ZNF772Q68DY9 489 aaPredicted RBP24.76■■□□□ 1.55
SMG8-203ENST00000578922 MAP4K4O95819 1239 aaPredicted RBP24.76■■□□□ 1.55
SMG8-203ENST00000578922 RILPL2Q969X0 211 aa24.76■■□□□ 1.55
SMG8-203ENST00000578922 BCL11BQ9C0K0 894 aaPredicted RBP24.76■■□□□ 1.55
SMG8-203ENST00000578922 EAF2Q96CJ1 260 aaPredicted RBP24.75■■□□□ 1.55
SMG8-203ENST00000578922 CCDC8Q9H0W5 538 aaPredicted RBP24.75■■□□□ 1.55
SMG8-203ENST00000578922 ZNF831Q5JPB2 1677 aa24.75■■□□□ 1.55
SMG8-203ENST00000578922 CNTNAP4Q9C0A0 1308 aa24.75■■□□□ 1.55
SMG8-203ENST00000578922 ANTXR1Q9H6X2 564 aa24.74■■□□□ 1.55
SMG8-203ENST00000578922 GNPATO15228 680 aa24.74■■□□□ 1.55
SMG8-203ENST00000578922 TRIM37O94972 964 aa24.74■■□□□ 1.55
SMG8-203ENST00000578922 TFCP2Q12800 502 aa24.74■■□□□ 1.55
SMG8-203ENST00000578922 SUSD4Q5VX71 490 aa24.74■■□□□ 1.55
SMG8-203ENST00000578922 IRS4O14654 1257 aaPredicted RBP24.73■■□□□ 1.55
SMG8-203ENST00000578922 RBM6P78332 1123 aaKnown RBP24.73■■□□□ 1.55
SMG8-203ENST00000578922 FAM196AQ6ZSG2 479 aa24.73■■□□□ 1.55
SMG8-203ENST00000578922 PI4K2BQ8TCG2 481 aa24.73■■□□□ 1.55
SMG8-203ENST00000578922 TLR7Q9NYK1 1049 aaKnown RBP24.73■■□□□ 1.55
SMG8-203ENST00000578922 NIP7Q9Y221 180 aaKnown RBP eCLIP24.73■■□□□ 1.55
SMG8-203ENST00000578922 TBC1D2Q9BYX2 928 aa24.72■■□□□ 1.55
SMG8-203ENST00000578922 C22orf23Q9BZE7 217 aa24.72■■□□□ 1.55
SMG8-203ENST00000578922 AOX1Q06278 1338 aa24.72■■□□□ 1.55
SMG8-203ENST00000578922 CCDC57Q2TAC2 916 aa24.71■■□□□ 1.55
SMG8-203ENST00000578922 CDHR2Q9BYE9 1310 aa24.71■■□□□ 1.55
SMG8-203ENST00000578922 PLA2G12BQ9BX93 195 aa24.71■■□□□ 1.55
SMG8-203ENST00000578922 LRRC24Q50LG9 513 aa24.7■■□□□ 1.55
SMG8-203ENST00000578922 AMIGO3Q86WK7 504 aa24.7■■□□□ 1.55
SMG8-203ENST00000578922 IL27Q8NEV9 243 aa24.7■■□□□ 1.55
SMG8-203ENST00000578922 PUS3Q9BZE2 481 aaKnown RBP24.7■■□□□ 1.54
SMG8-203ENST00000578922 RPS6KA4O75676 772 aa24.69■■□□□ 1.54
SMG8-203ENST00000578922 RC3H1Q5TC82 1133 aaKnown RBP24.69■■□□□ 1.54
SMG8-203ENST00000578922 ATG9AQ7Z3C6 839 aa24.69■■□□□ 1.54
SMG8-203ENST00000578922 LRRC4BQ9NT99 713 aa24.69■■□□□ 1.54
SMG8-203ENST00000578922 ECHDC1Q9NTX5 307 aa24.69■■□□□ 1.54
SMG8-203ENST00000578922 ZNF652Q9Y2D9 606 aa24.69■■□□□ 1.54
SMG8-203ENST00000578922 HCLS1P14317 486 aaPredicted RBP24.69■■□□□ 1.54
SMG8-203ENST00000578922 CASC1Q6TDU7 716 aa24.69■■□□□ 1.54
SMG8-203ENST00000578922 BICDL1Q6ZP65 573 aa24.69■■□□□ 1.54
SMG8-203ENST00000578922 UTP14AQ9BVJ6 771 aaKnown RBP24.69■■□□□ 1.54
SMG8-203ENST00000578922 SRP68Q9UHB9 627 aaKnown RBP24.69■■□□□ 1.54
SMG8-203ENST00000578922 LY75O60449 1722 aa24.68■■□□□ 1.54
SMG8-203ENST00000578922 CSF1RP07333 972 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms