RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 PI4KAP2A4QPH2 592 aa8.38□□□□□ -1.07
TRAF4-213ENST00000578917 E9PSI1 815 aa8.38□□□□□ -1.07
TRAF4-213ENST00000578917 NTSR2O95665 410 aa8.38□□□□□ -1.07
TRAF4-213ENST00000578917 FKBP5Q13451 457 aaPredicted RBP8.38□□□□□ -1.07
TRAF4-213ENST00000578917 KSR2Q6VAB6 950 aa8.38□□□□□ -1.07
TRAF4-213ENST00000578917 RTKN2Q8IZC4 609 aa8.38□□□□□ -1.07
TRAF4-213ENST00000578917 PI4KAP1Q8N8J0 262 aa8.38□□□□□ -1.07
TRAF4-213ENST00000578917 FAM89AQ96GI7 184 aa8.38□□□□□ -1.07
TRAF4-213ENST00000578917 MAP3K2Q9Y2U5 619 aa8.38□□□□□ -1.07
TRAF4-213ENST00000578917 DLG5Q8TDM6 1919 aa8.38□□□□□ -1.07
TRAF4-213ENST00000578917 ATP10DQ9P241 1426 aa8.37□□□□□ -1.07
TRAF4-213ENST00000578917 COL24A1Q17RW2 1714 aa8.37□□□□□ -1.07
TRAF4-213ENST00000578917 RNF123Q5XPI4 1314 aa8.37□□□□□ -1.07
TRAF4-213ENST00000578917 VAMP4O75379 141 aa8.37□□□□□ -1.07
TRAF4-213ENST00000578917 RASSF7Q02833 373 aa8.37□□□□□ -1.07
TRAF4-213ENST00000578917 CCDC93Q567U6 631 aa8.37□□□□□ -1.07
TRAF4-213ENST00000578917 SLC10A5Q5PT55 438 aa8.37□□□□□ -1.07
TRAF4-213ENST00000578917 DDX46Q7L014 1031 aaKnown RBP8.37□□□□□ -1.07
TRAF4-213ENST00000578917 SYNE4Q8N205 404 aa8.37□□□□□ -1.07
TRAF4-213ENST00000578917 METTL22Q9BUU2 404 aaPredicted RBP8.37□□□□□ -1.07
TRAF4-213ENST00000578917 TAOK3Q9H2K8 898 aa8.37□□□□□ -1.07
TRAF4-213ENST00000578917 SPINK5Q9NQ38 1064 aaPredicted RBP8.37□□□□□ -1.07
TRAF4-213ENST00000578917 CWC25Q9NXE8 425 aaPredicted RBP8.37□□□□□ -1.07
TRAF4-213ENST00000578917 VIRMAQ69YN4 1812 aaKnown RBP8.37□□□□□ -1.07
TRAF4-213ENST00000578917 KDM3BQ7LBC6 1761 aa8.36□□□□□ -1.07
TRAF4-213ENST00000578917 IRS4O14654 1257 aaPredicted RBP8.36□□□□□ -1.07
TRAF4-213ENST00000578917 HOXA10P31260 410 aaPredicted RBP8.36□□□□□ -1.07
TRAF4-213ENST00000578917 FLIIQ13045 1269 aa8.36□□□□□ -1.07
TRAF4-213ENST00000578917 TRIM28Q13263 835 aaKnown RBP8.36□□□□□ -1.07
TRAF4-213ENST00000578917 CRY2Q49AN0 593 aa8.36□□□□□ -1.07
TRAF4-213ENST00000578917 DPY19L2Q6NUT2 758 aa8.36□□□□□ -1.07
TRAF4-213ENST00000578917 C16orf71Q8IYS4 520 aaPredicted RBP8.36□□□□□ -1.07
TRAF4-213ENST00000578917 CCDC191Q8NCU4 936 aa8.36□□□□□ -1.07
TRAF4-213ENST00000578917 CRAMP1Q96RY5 1269 aa8.36□□□□□ -1.07
TRAF4-213ENST00000578917 ISCA1Q9BUE6 129 aa8.36□□□□□ -1.07
TRAF4-213ENST00000578917 KDM2BQ8NHM5 1336 aa8.35□□□□□ -1.07
TRAF4-213ENST00000578917 PPEF1O14829 653 aaPredicted RBP8.35□□□□□ -1.07
TRAF4-213ENST00000578917 BBOX1O75936 387 aa8.35□□□□□ -1.07
TRAF4-213ENST00000578917 CC2D2BQ6DHV5 1058 aa8.35□□□□□ -1.07
TRAF4-213ENST00000578917 OLFM4Q6UX06 510 aa8.35□□□□□ -1.07
TRAF4-213ENST00000578917 C3orf67Q6ZVT6 689 aa8.35□□□□□ -1.07
TRAF4-213ENST00000578917 G2E3Q7L622 706 aa8.35□□□□□ -1.07
TRAF4-213ENST00000578917 ZBTB38Q8NAP3 1195 aaPredicted RBP8.35□□□□□ -1.07
TRAF4-213ENST00000578917 JARID2Q92833 1246 aaPredicted RBP8.35□□□□□ -1.07
TRAF4-213ENST00000578917 ABCC12Q96J65 1359 aa8.35□□□□□ -1.07
TRAF4-213ENST00000578917 IBTKQ9P2D0 1353 aaPredicted RBP8.35□□□□□ -1.07
TRAF4-213ENST00000578917 NFKBIEO00221 500 aa8.34□□□□□ -1.07
TRAF4-213ENST00000578917 FKBP4Q02790 459 aaKnown RBP eCLIP8.34□□□□□ -1.07
TRAF4-213ENST00000578917 SLFN5Q08AF3 891 aa8.34□□□□□ -1.07
TRAF4-213ENST00000578917 GRIPAP1Q4V328 841 aa8.34□□□□□ -1.07
TRAF4-213ENST00000578917 SLC4A10Q6U841 1118 aa8.34□□□□□ -1.07
TRAF4-213ENST00000578917 C7orf43Q8WVR3 580 aa8.34□□□□□ -1.07
TRAF4-213ENST00000578917 DNAAF4Q8WXU2 420 aa8.34□□□□□ -1.07
TRAF4-213ENST00000578917 JDP2Q8WYK2 163 aa8.34□□□□□ -1.07
TRAF4-213ENST00000578917 CDCA7LQ96GN5 454 aa8.34□□□□□ -1.07
TRAF4-213ENST00000578917 ZNF277Q9NRM2 450 aaPredicted RBP8.34□□□□□ -1.07
TRAF4-213ENST00000578917 CHD4Q14839 1912 aa8.34□□□□□ -1.07
TRAF4-213ENST00000578917 PCCAP05165 728 aaPredicted RBP8.33□□□□□ -1.08
TRAF4-213ENST00000578917 HNRNPUQ00839 825 aaKnown RBP eCLIP8.33□□□□□ -1.08
TRAF4-213ENST00000578917 CWF19L2Q2TBE0 894 aaKnown RBP8.33□□□□□ -1.08
TRAF4-213ENST00000578917 CCDC152Q4G0S7 254 aa8.33□□□□□ -1.08
TRAF4-213ENST00000578917 DPP8Q6V1X1 898 aaPredicted RBP8.33□□□□□ -1.08
TRAF4-213ENST00000578917 CCDC85AQ96PX6 553 aaPredicted RBP8.33□□□□□ -1.08
TRAF4-213ENST00000578917 RRAGCQ9HB90 399 aa8.33□□□□□ -1.08
TRAF4-213ENST00000578917 N4BP2Q86UW6 1770 aaPredicted RBP8.33□□□□□ -1.08
TRAF4-213ENST00000578917 ZNF521Q96K83 1311 aa8.32□□□□□ -1.08
TRAF4-213ENST00000578917 NEURL1BA8MQ27 555 aa8.32□□□□□ -1.08
TRAF4-213ENST00000578917 F6X3S4 739 aa8.32□□□□□ -1.08
TRAF4-213ENST00000578917 PDE8AO60658 829 aa8.32□□□□□ -1.08
TRAF4-213ENST00000578917 IGKV5-2P06315 115 aa8.32□□□□□ -1.08
TRAF4-213ENST00000578917 RPS8P62241 208 aaKnown RBP8.32□□□□□ -1.08
TRAF4-213ENST00000578917 GRAPQ13588 217 aa8.32□□□□□ -1.08
TRAF4-213ENST00000578917 SF3B3Q15393 1217 aaKnown RBP8.32□□□□□ -1.08
TRAF4-213ENST00000578917 UBE3BQ7Z3V4 1068 aa8.32□□□□□ -1.08
TRAF4-213ENST00000578917 TMC4Q7Z404 712 aa8.32□□□□□ -1.08
TRAF4-213ENST00000578917 SP8Q8IXZ3 490 aa8.32□□□□□ -1.08
TRAF4-213ENST00000578917 LARGE2Q8N3Y3 721 aa8.32□□□□□ -1.08
TRAF4-213ENST00000578917 MPNDQ8N594 471 aa8.32□□□□□ -1.08
TRAF4-213ENST00000578917 SUPT20HQ8NEM7 779 aa8.32□□□□□ -1.08
TRAF4-213ENST00000578917 LINS1Q8NG48 757 aa8.32□□□□□ -1.08
TRAF4-213ENST00000578917 GRAPLQ8TC17 118 aaPredicted RBP8.32□□□□□ -1.08
TRAF4-213ENST00000578917 NMRK2Q9NPI5 230 aa8.32□□□□□ -1.08
TRAF4-213ENST00000578917 C9orf78Q9NZ63 289 aaPredicted RBP8.32□□□□□ -1.08
TRAF4-213ENST00000578917 NSFL1CQ9UNZ2 370 aaKnown RBP8.32□□□□□ -1.08
TRAF4-213ENST00000578917 ATP6V0A2Q9Y487 856 aa8.32□□□□□ -1.08
TRAF4-213ENST00000578917 SCN7AQ01118 1682 aa8.32□□□□□ -1.08
TRAF4-213ENST00000578917 ABCC4O15439 1325 aa8.31□□□□□ -1.08
TRAF4-213ENST00000578917 LTBP3Q9NS15 1303 aa8.31□□□□□ -1.08
TRAF4-213ENST00000578917 GLTPD2A6NH11 291 aa8.31□□□□□ -1.08
TRAF4-213ENST00000578917 G3V3G9 751 aa8.31□□□□□ -1.08
TRAF4-213ENST00000578917 C6orf229H3BNL8 230 aa8.31□□□□□ -1.08
TRAF4-213ENST00000578917 VEGFAP15692 232 aaPredicted RBP8.31□□□□□ -1.08
TRAF4-213ENST00000578917 IARSP41252 1262 aaKnown RBP8.31□□□□□ -1.08
TRAF4-213ENST00000578917 EIF6P56537 245 aaKnown RBP8.31□□□□□ -1.08
TRAF4-213ENST00000578917 C1QTNF8P60827 252 aa8.31□□□□□ -1.08
TRAF4-213ENST00000578917 GCKRQ14397 625 aa8.31□□□□□ -1.08
TRAF4-213ENST00000578917 DCAF8Q5TAQ9 597 aa8.31□□□□□ -1.08
TRAF4-213ENST00000578917 PSMD1Q99460 953 aa8.31□□□□□ -1.08
TRAF4-213ENST00000578917 BCL2L13Q9BXK5 485 aa8.31□□□□□ -1.08
TRAF4-213ENST00000578917 SMC4Q9NTJ3 1288 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms