RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 COL11A2P13942 1736 aaPredicted RBP12.05□□□□□ -0.48
SNX11-205ENST00000578861 H0YGN5 161 aa12.04□□□□□ -0.48
SNX11-205ENST00000578861 HSPA5P11021 654 aaKnown RBP12.04□□□□□ -0.48
SNX11-205ENST00000578861 EN2P19622 333 aaPredicted RBP12.04□□□□□ -0.48
SNX11-205ENST00000578861 ALDH1B1P30837 517 aa12.04□□□□□ -0.48
SNX11-205ENST00000578861 HIRAP54198 1017 aaPredicted RBP12.04□□□□□ -0.48
SNX11-205ENST00000578861 CHRDL2Q6WN34 429 aa12.04□□□□□ -0.48
SNX11-205ENST00000578861 ZC3H15Q8WU90 426 aaKnown RBP12.04□□□□□ -0.48
SNX11-205ENST00000578861 PGAP2Q9UHJ9 254 aa12.04□□□□□ -0.48
SNX11-205ENST00000578861 ANKRD31Q8N7Z5 1873 aa12.04□□□□□ -0.48
SNX11-205ENST00000578861 TRPM7Q96QT4 1865 aa12.04□□□□□ -0.48
SNX11-205ENST00000578861 TRIOBPQ9H2D6 2365 aa12.03□□□□□ -0.48
SNX11-205ENST00000578861 EIF4G2P78344 907 aaKnown RBP eCLIP12.03□□□□□ -0.48
SNX11-205ENST00000578861 MORC1Q86VD1 984 aa12.03□□□□□ -0.48
SNX11-205ENST00000578861 TRPM4Q8TD43 1214 aa12.03□□□□□ -0.48
SNX11-205ENST00000578861 TJP1Q07157 1748 aa12.03□□□□□ -0.48
SNX11-205ENST00000578861 PPIP5K2O43314 1243 aa12.02□□□□□ -0.49
SNX11-205ENST00000578861 SLC10A3P09131 477 aa12.02□□□□□ -0.49
SNX11-205ENST00000578861 KRT26Q7Z3Y9 468 aa12.02□□□□□ -0.49
SNX11-205ENST00000578861 AEBP1Q8IUX7 1158 aa12.02□□□□□ -0.49
SNX11-205ENST00000578861 SLC52A2Q9HAB3 445 aa12.02□□□□□ -0.49
SNX11-205ENST00000578861 SCN11AQ9UI33 1791 aa12.01□□□□□ -0.49
SNX11-205ENST00000578861 GPR25O00155 361 aa12.01□□□□□ -0.49
SNX11-205ENST00000578861 GTF2E1P29083 439 aaPredicted RBP12.01□□□□□ -0.49
SNX11-205ENST00000578861 CXCL9Q07325 125 aa12.01□□□□□ -0.49
SNX11-205ENST00000578861 INTS3Q68E01 1043 aaKnown RBP12.01□□□□□ -0.49
SNX11-205ENST00000578861 LGR6Q9HBX8 967 aa12.01□□□□□ -0.49
SNX11-205ENST00000578861 CAMTA2O94983 1202 aa12□□□□□ -0.49
SNX11-205ENST00000578861 AOC3Q16853 763 aa12□□□□□ -0.49
SNX11-205ENST00000578861 SULT6B1Q6IMI4 303 aa12□□□□□ -0.49
SNX11-205ENST00000578861 TPTE2Q6XPS3 522 aa12□□□□□ -0.49
SNX11-205ENST00000578861 REM2Q8IYK8 340 aaPredicted RBP12□□□□□ -0.49
SNX11-205ENST00000578861 OTUD5Q96G74 571 aa12□□□□□ -0.49
SNX11-205ENST00000578861 CLSPNQ9HAW4 1339 aa12□□□□□ -0.49
SNX11-205ENST00000578861 NPC1L1Q9UHC9 1359 aa12□□□□□ -0.49
SNX11-205ENST00000578861 COL4A5P29400 1685 aa12□□□□□ -0.49
SNX11-205ENST00000578861 MKI67P46013 3256 aaKnown RBP11.99□□□□□ -0.49
SNX11-205ENST00000578861 SHTN1A0MZ66 631 aa11.99□□□□□ -0.49
SNX11-205ENST00000578861 ADM5C9JUS6 153 aa11.99□□□□□ -0.49
SNX11-205ENST00000578861 H7C1D1 291 aa11.99□□□□□ -0.49
SNX11-205ENST00000578861 FKTNO75072 461 aa11.99□□□□□ -0.49
SNX11-205ENST00000578861 RAD17O75943 681 aa11.99□□□□□ -0.49
SNX11-205ENST00000578861 CC2D2BQ6DHV5 1058 aa11.99□□□□□ -0.49
SNX11-205ENST00000578861 VSIG10Q8N0Z9 540 aa11.99□□□□□ -0.49
SNX11-205ENST00000578861 RBM27Q9P2N5 1060 aaKnown RBP11.99□□□□□ -0.49
SNX11-205ENST00000578861 CNOT7Q9UIV1 285 aaKnown RBP11.99□□□□□ -0.49
SNX11-205ENST00000578861 SZT2Q5T011 3432 aa11.98□□□□□ -0.49
SNX11-205ENST00000578861 KLRG2A4D1S0 409 aaPredicted RBP11.98□□□□□ -0.49
SNX11-205ENST00000578861 RBM26Q5T8P6 1007 aaKnown RBP11.98□□□□□ -0.49
SNX11-205ENST00000578861 DZIP3Q86Y13 1208 aaKnown RBP11.98□□□□□ -0.49
SNX11-205ENST00000578861 TTC5Q8N0Z6 440 aa11.98□□□□□ -0.49
SNX11-205ENST00000578861 DCPSQ96C86 337 aaKnown RBP11.98□□□□□ -0.49
SNX11-205ENST00000578861 ZNRF3Q9ULT6 936 aa11.98□□□□□ -0.49
SNX11-205ENST00000578861 TRIM17Q9Y577 477 aa11.98□□□□□ -0.49
SNX11-205ENST00000578861 CACNA1SQ13698 1873 aa11.97□□□□□ -0.49
SNX11-205ENST00000578861 A1BGP04217 495 aa11.97□□□□□ -0.49
SNX11-205ENST00000578861 SAMD7Q7Z3H4 446 aa11.97□□□□□ -0.49
SNX11-205ENST00000578861 SLC51AQ86UW1 340 aa11.97□□□□□ -0.49
SNX11-205ENST00000578861 RASAL3Q86YV0 1011 aa11.97□□□□□ -0.49
SNX11-205ENST00000578861 CCER1Q8TC90 406 aaPredicted RBP11.97□□□□□ -0.49
SNX11-205ENST00000578861 TMEM106CQ9BVX2 250 aa11.97□□□□□ -0.49
SNX11-205ENST00000578861 KNSTRNQ9Y448 316 aa11.97□□□□□ -0.49
SNX11-205ENST00000578861 IL6STP40189 918 aaPredicted RBP11.96□□□□□ -0.49
SNX11-205ENST00000578861 TNIP1Q15025 636 aa11.96□□□□□ -0.49
SNX11-205ENST00000578861 TBC1D10BQ4KMP7 808 aaPredicted RBP11.96□□□□□ -0.49
SNX11-205ENST00000578861 MICALL2Q8IY33 904 aa11.96□□□□□ -0.49
SNX11-205ENST00000578861 RPGRQ92834 1020 aaKnown RBP11.96□□□□□ -0.49
SNX11-205ENST00000578861 COL25A1Q9BXS0 654 aaPredicted RBP11.96□□□□□ -0.49
SNX11-205ENST00000578861 TMX4Q9H1E5 349 aaPredicted RBP11.96□□□□□ -0.49
SNX11-205ENST00000578861 NIP7Q9Y221 180 aaKnown RBP eCLIP11.96□□□□□ -0.49
SNX11-205ENST00000578861 RNMTO43148 476 aaKnown RBP11.95□□□□□ -0.5
SNX11-205ENST00000578861 IL13P35225 146 aa11.95□□□□□ -0.5
SNX11-205ENST00000578861 MKRN3Q13064 507 aaKnown RBP11.95□□□□□ -0.5
SNX11-205ENST00000578861 PIP4K2AP48426 406 aaPredicted RBP11.94□□□□□ -0.5
SNX11-205ENST00000578861 GRIPAP1Q4V328 841 aa11.94□□□□□ -0.5
SNX11-205ENST00000578861 DPF3Q92784 378 aa11.94□□□□□ -0.5
SNX11-205ENST00000578861 R3HDMLQ9H3Y0 253 aa11.94□□□□□ -0.5
SNX11-205ENST00000578861 ZNF652Q9Y2D9 606 aa11.94□□□□□ -0.5
SNX11-205ENST00000578861 PPEF1O14829 653 aaPredicted RBP11.93□□□□□ -0.5
SNX11-205ENST00000578861 MYCP01106 439 aaPredicted RBP11.93□□□□□ -0.5
SNX11-205ENST00000578861 HMOX1P09601 288 aa11.93□□□□□ -0.5
SNX11-205ENST00000578861 SULF1Q8IWU6 871 aa11.93□□□□□ -0.5
SNX11-205ENST00000578861 TEX13AQ9BXU3 409 aaPredicted RBP11.93□□□□□ -0.5
SNX11-205ENST00000578861 ZBTB12Q9Y330 459 aaPredicted RBP11.93□□□□□ -0.5
SNX11-205ENST00000578861 CNGB1Q14028 1251 aaPredicted RBP11.92□□□□□ -0.5
SNX11-205ENST00000578861 SLC4A8Q2Y0W8 1093 aa11.92□□□□□ -0.5
SNX11-205ENST00000578861 OTOP1Q7RTM1 612 aa11.92□□□□□ -0.5
SNX11-205ENST00000578861 ZNF496Q96IT1 587 aaPredicted RBP11.92□□□□□ -0.5
SNX11-205ENST00000578861 BCORQ6W2J9 1755 aa11.92□□□□□ -0.5
SNX11-205ENST00000578861 CEP290O15078 2479 aa11.92□□□□□ -0.5
SNX11-205ENST00000578861 COL6A3P12111 3177 aa11.91□□□□□ -0.5
SNX11-205ENST00000578861 CDHR2Q9BYE9 1310 aa11.91□□□□□ -0.5
SNX11-205ENST00000578861 PRAMEF22A3QJZ6 481 aa11.91□□□□□ -0.5
SNX11-205ENST00000578861 EGFRP00533 1210 aa11.91□□□□□ -0.5
SNX11-205ENST00000578861 AMER1Q5JTC6 1135 aaPredicted RBP11.91□□□□□ -0.5
SNX11-205ENST00000578861 CLEC4GQ6UXB4 293 aa11.91□□□□□ -0.5
SNX11-205ENST00000578861 NUTM1Q86Y26 1132 aa11.91□□□□□ -0.5
SNX11-205ENST00000578861 CDCA5Q96FF9 252 aa11.91□□□□□ -0.5
SNX11-205ENST00000578861 AKAP11Q9UKA4 1901 aa11.9□□□□□ -0.5
SNX11-205ENST00000578861 UBE2Q2LH0YL09 131 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms