RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 COL6A3P12111 3177 aa15.3■□□□□ 0.04
GGA3-206ENST00000578773 ZNF496Q96IT1 587 aaPredicted RBP15.3■□□□□ 0.04
GGA3-206ENST00000578773 PSMD1Q99460 953 aa15.3■□□□□ 0.04
GGA3-206ENST00000578773 ADARB2Q9NS39 739 aaKnown RBP15.3■□□□□ 0.04
GGA3-206ENST00000578773 SAGE1Q9NXZ1 904 aa15.3■□□□□ 0.04
GGA3-206ENST00000578773 TRIOBPQ9H2D6 2365 aa15.29■□□□□ 0.04
GGA3-206ENST00000578773 NUP98P52948 1817 aa15.29■□□□□ 0.04
GGA3-206ENST00000578773 ABCC12Q96J65 1359 aa15.29■□□□□ 0.04
GGA3-206ENST00000578773 LARGE2Q8N3Y3 721 aa15.29■□□□□ 0.04
GGA3-206ENST00000578773 HEG1Q9ULI3 1381 aa15.28■□□□□ 0.04
GGA3-206ENST00000578773 STARD3NLO95772 234 aa15.28■□□□□ 0.04
GGA3-206ENST00000578773 IL6STP40189 918 aaPredicted RBP15.28■□□□□ 0.04
GGA3-206ENST00000578773 GMPSP49915 693 aaPredicted RBP15.28■□□□□ 0.04
GGA3-206ENST00000578773 PGAP2Q9UHJ9 254 aa15.28■□□□□ 0.04
GGA3-206ENST00000578773 TAF1P21675 1872 aa15.28■□□□□ 0.04
GGA3-206ENST00000578773 DLL1O00548 723 aa15.27■□□□□ 0.04
GGA3-206ENST00000578773 USP48Q86UV5 1035 aa15.27■□□□□ 0.04
GGA3-206ENST00000578773 DZIP3Q86Y13 1208 aaKnown RBP15.27■□□□□ 0.04
GGA3-206ENST00000578773 NPC1L1Q9UHC9 1359 aa15.26■□□□□ 0.03
GGA3-206ENST00000578773 TCERG1O14776 1098 aaKnown RBP15.26■□□□□ 0.03
GGA3-206ENST00000578773 RGMBQ6NW40 437 aa15.26■□□□□ 0.03
GGA3-206ENST00000578773 CSRNP1Q96S65 589 aa15.26■□□□□ 0.03
GGA3-206ENST00000578773 LAMB2P55268 1798 aa15.26■□□□□ 0.03
GGA3-206ENST00000578773 CEP290O15078 2479 aa15.25■□□□□ 0.03
GGA3-206ENST00000578773 CXCL9Q07325 125 aa15.25■□□□□ 0.03
GGA3-206ENST00000578773 AOC3Q16853 763 aa15.25■□□□□ 0.03
GGA3-206ENST00000578773 CUL9Q8IWT3 2517 aa15.24■□□□□ 0.03
GGA3-206ENST00000578773 PRAMEF22A3QJZ6 481 aa15.24■□□□□ 0.03
GGA3-206ENST00000578773 KCNQ3O43525 872 aa15.24■□□□□ 0.03
GGA3-206ENST00000578773 KIAA0100Q14667 2235 aaKnown RBP15.24■□□□□ 0.03
GGA3-206ENST00000578773 POTEFA5A3E0 1075 aa15.23■□□□□ 0.03
GGA3-206ENST00000578773 IL13P35225 146 aa15.23■□□□□ 0.03
GGA3-206ENST00000578773 MTHFSDQ2M296 383 aaKnown RBP15.23■□□□□ 0.03
GGA3-206ENST00000578773 NIM1KQ8IY84 436 aa15.23■□□□□ 0.03
GGA3-206ENST00000578773 ADM5C9JUS6 153 aa15.22■□□□□ 0.03
GGA3-206ENST00000578773 EGFRP00533 1210 aa15.22■□□□□ 0.03
GGA3-206ENST00000578773 HMOX1P09601 288 aa15.22■□□□□ 0.03
GGA3-206ENST00000578773 ZNF157P51786 506 aaPredicted RBP15.22■□□□□ 0.03
GGA3-206ENST00000578773 CDC37L1Q7L3B6 337 aa15.22■□□□□ 0.03
GGA3-206ENST00000578773 COLQQ9Y215 455 aaPredicted RBP15.22■□□□□ 0.03
GGA3-206ENST00000578773 PPIP5K2O43314 1243 aa15.21■□□□□ 0.03
GGA3-206ENST00000578773 SLC10A3P09131 477 aa15.21■□□□□ 0.03
GGA3-206ENST00000578773 ALDH1B1P30837 517 aa15.21■□□□□ 0.03
GGA3-206ENST00000578773 NUTM1Q86Y26 1132 aa15.21■□□□□ 0.03
GGA3-206ENST00000578773 TTC5Q8N0Z6 440 aa15.21■□□□□ 0.03
GGA3-206ENST00000578773 ZNF296Q8WUU4 475 aaPredicted RBP15.21■□□□□ 0.03
GGA3-206ENST00000578773 GBA2Q9HCG7 927 aaPredicted RBP15.21■□□□□ 0.03
GGA3-206ENST00000578773 NIP7Q9Y221 180 aaKnown RBP eCLIP15.21■□□□□ 0.03
GGA3-206ENST00000578773 SLC24A1O60721 1099 aa15.2■□□□□ 0.02
GGA3-206ENST00000578773 RAD17O75943 681 aa15.2■□□□□ 0.02
GGA3-206ENST00000578773 TBC1D8O95759 1140 aa15.2■□□□□ 0.02
GGA3-206ENST00000578773 HLFQ16534 295 aa15.2■□□□□ 0.02
GGA3-206ENST00000578773 CRY2Q49AN0 593 aa15.2■□□□□ 0.02
GGA3-206ENST00000578773 C3orf67Q6ZVT6 689 aa15.2■□□□□ 0.02
GGA3-206ENST00000578773 KDM3BQ7LBC6 1761 aa15.2■□□□□ 0.02
GGA3-206ENST00000578773 RIC1Q4ADV7 1423 aa15.19■□□□□ 0.02
GGA3-206ENST00000578773 ZNF790Q6PG37 636 aa15.19■□□□□ 0.02
GGA3-206ENST00000578773 USP16Q9Y5T5 823 aa15.19■□□□□ 0.02
GGA3-206ENST00000578773 RANBP2P49792 3224 aaKnown RBP15.18■□□□□ 0.02
GGA3-206ENST00000578773 TPTE2Q6XPS3 522 aa15.18■□□□□ 0.02
GGA3-206ENST00000578773 SAMD7Q7Z3H4 446 aa15.18■□□□□ 0.02
GGA3-206ENST00000578773 RASAL3Q86YV0 1011 aa15.18■□□□□ 0.02
GGA3-206ENST00000578773 DUOX1Q9NRD9 1551 aa15.18■□□□□ 0.02
GGA3-206ENST00000578773 SCN9AQ15858 1988 aa15.17■□□□□ 0.02
GGA3-206ENST00000578773 LAMB4A4D0S4 1761 aa15.17■□□□□ 0.02
GGA3-206ENST00000578773 PPEF1O14829 653 aaPredicted RBP15.17■□□□□ 0.02
GGA3-206ENST00000578773 ZC3H15Q8WU90 426 aaKnown RBP15.17■□□□□ 0.02
GGA3-206ENST00000578773 CCDC102AQ96A19 550 aa15.17■□□□□ 0.02
GGA3-206ENST00000578773 HDAC9Q9UKV0 1011 aa15.17■□□□□ 0.02
GGA3-206ENST00000578773 ASTN2O75129 1339 aaPredicted RBP15.17■□□□□ 0.02
GGA3-206ENST00000578773 YDJCA8MPS7 323 aa15.16■□□□□ 0.02
GGA3-206ENST00000578773 CLEC4GQ6UXB4 293 aa15.16■□□□□ 0.02
GGA3-206ENST00000578773 MICALL2Q8IY33 904 aa15.16■□□□□ 0.02
GGA3-206ENST00000578773 IL17REQ8NFR9 667 aa15.16■□□□□ 0.02
GGA3-206ENST00000578773 BCL2L13Q9BXK5 485 aa15.16■□□□□ 0.02
GGA3-206ENST00000578773 R3HDMLQ9H3Y0 253 aa15.16■□□□□ 0.02
GGA3-206ENST00000578773 CNOT7Q9UIV1 285 aaKnown RBP15.16■□□□□ 0.02
GGA3-206ENST00000578773 ZNRF3Q9ULT6 936 aa15.16■□□□□ 0.02
GGA3-206ENST00000578773 ZBTB12Q9Y330 459 aaPredicted RBP15.16■□□□□ 0.02
GGA3-206ENST00000578773 NBPF26B4DH59 902 aa15.15■□□□□ 0.02
GGA3-206ENST00000578773 PKN2Q16513 984 aaKnown RBP15.15■□□□□ 0.02
GGA3-206ENST00000578773 TBC1D10BQ4KMP7 808 aaPredicted RBP15.15■□□□□ 0.02
GGA3-206ENST00000578773 NBPF10Q6P3W6 841 aaKnown RBP15.15■□□□□ 0.02
GGA3-206ENST00000578773 FBXO46Q6PJ61 603 aaPredicted RBP15.15■□□□□ 0.02
GGA3-206ENST00000578773 KRT26Q7Z3Y9 468 aa15.15■□□□□ 0.02
GGA3-206ENST00000578773 C2orf69Q8N8R5 385 aa15.15■□□□□ 0.02
GGA3-206ENST00000578773 CDCA8Q53HL2 280 aa15.14■□□□□ 0.01
GGA3-206ENST00000578773 CC2D2BQ6DHV5 1058 aa15.14■□□□□ 0.01
GGA3-206ENST00000578773 SLC17A8Q8NDX2 589 aa15.14■□□□□ 0.01
GGA3-206ENST00000578773 POLR3GLQ9BT43 218 aa15.14■□□□□ 0.01
GGA3-206ENST00000578773 TEX13AQ9BXU3 409 aaPredicted RBP15.14■□□□□ 0.01
GGA3-206ENST00000578773 HOXA10P31260 410 aaPredicted RBP15.13■□□□□ 0.01
GGA3-206ENST00000578773 MOB2Q70IA6 237 aa15.13■□□□□ 0.01
GGA3-206ENST00000578773 NPM2Q86SE8 214 aaKnown RBP15.13■□□□□ 0.01
GGA3-206ENST00000578773 RPGRQ92834 1020 aaKnown RBP15.13■□□□□ 0.01
GGA3-206ENST00000578773 FMNL2Q96PY5 1086 aa15.13■□□□□ 0.01
GGA3-206ENST00000578773 ZNF652Q9Y2D9 606 aa15.13■□□□□ 0.01
GGA3-206ENST00000578773 ANKRD36CQ5JPF3 1778 aa15.13■□□□□ 0.01
GGA3-206ENST00000578773 EN2P19622 333 aaPredicted RBP15.12■□□□□ 0.01
GGA3-206ENST00000578773 GTF2E1P29083 439 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms