RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 TOM1L2Q6ZVM7 507 aa11.26□□□□□ -0.61
CDK5RAP3-208ENST00000578525 RASEFQ8IZ41 740 aa11.26□□□□□ -0.61
CDK5RAP3-208ENST00000578525 TM6SF1Q9BZW5 370 aa11.26□□□□□ -0.61
CDK5RAP3-208ENST00000578525 SIL1Q9H173 461 aa11.26□□□□□ -0.61
CDK5RAP3-208ENST00000578525 TLR7Q9NYK1 1049 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-208ENST00000578525 CCDC171Q6TFL3 1326 aa11.26□□□□□ -0.61
CDK5RAP3-208ENST00000578525 RFX7Q2KHR2 1363 aa11.26□□□□□ -0.61
CDK5RAP3-208ENST00000578525 TNS2Q63HR2 1409 aa11.26□□□□□ -0.61
CDK5RAP3-208ENST00000578525 NHSL1Q5SYE7 1610 aa11.25□□□□□ -0.61
CDK5RAP3-208ENST00000578525 PRPF40AO75400 957 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-208ENST00000578525 PIP4K2AP48426 406 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-208ENST00000578525 AK2P54819 239 aa11.25□□□□□ -0.61
CDK5RAP3-208ENST00000578525 CASP7P55210 303 aa11.25□□□□□ -0.61
CDK5RAP3-208ENST00000578525 CARD10Q9BWT7 1032 aa11.25□□□□□ -0.61
CDK5RAP3-208ENST00000578525 LIMCH1Q9UPQ0 1083 aa11.25□□□□□ -0.61
CDK5RAP3-208ENST00000578525 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-208ENST00000578525 TJP1Q07157 1748 aa11.25□□□□□ -0.61
CDK5RAP3-208ENST00000578525 WDR33Q9C0J8 1336 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-208ENST00000578525 A0A087WZG4 1122 aa11.24□□□□□ -0.61
CDK5RAP3-208ENST00000578525 MBD3O95983 291 aa11.24□□□□□ -0.61
CDK5RAP3-208ENST00000578525 IL2RBP14784 551 aa11.24□□□□□ -0.61
CDK5RAP3-208ENST00000578525 NCLP19338 710 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-208ENST00000578525 PTPN12Q05209 780 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-208ENST00000578525 TNNI3KQ59H18 835 aa11.24□□□□□ -0.61
CDK5RAP3-208ENST00000578525 PRPF40BQ6NWY9 871 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-208ENST00000578525 RUFY3Q7L099 469 aa11.24□□□□□ -0.61
CDK5RAP3-208ENST00000578525 UBE3BQ7Z3V4 1068 aa11.24□□□□□ -0.61
CDK5RAP3-208ENST00000578525 ZSCAN31Q96LW9 406 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-208ENST00000578525 FSD1Q9BTV5 496 aa11.24□□□□□ -0.61
CDK5RAP3-208ENST00000578525 FPGT-TNNI3KV9GXZ4 949 aa11.24□□□□□ -0.61
CDK5RAP3-208ENST00000578525 RPAP1Q9BWH6 1393 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-208ENST00000578525 JCADQ9P266 1359 aa11.24□□□□□ -0.61
CDK5RAP3-208ENST00000578525 MED23Q9ULK4 1368 aa11.24□□□□□ -0.61
CDK5RAP3-208ENST00000578525 NBPF26B4DH59 902 aa11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 ATP5J2-PTCD1G3V325 749 aa11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 H7C1W4 665 aa11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 PTCD1O75127 700 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 ATP5JP18859 108 aa11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 CASTP20810 708 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 NECTIN1Q15223 517 aa11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 ZSCAN23Q3MJ62 389 aa11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 NBPF14Q5TI25 921 aa11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 VPS53Q5VIR6 699 aa11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 FOXD4L5Q5VV16 416 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 CREB3L3Q68CJ9 461 aa11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 CAVIN1Q6NZI2 390 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 NBPF10Q6P3W6 841 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 NBPF15Q8N660 670 aa11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 KLHDC4Q8TBB5 520 aa11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 FOXD4L4Q8WXT5 416 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 JARID2Q92833 1246 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 MAP4K1Q92918 833 aa11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 JAKMIP1Q96N16 626 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 BOLA2Q9H3K6 86 aa11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 ZSWIM6Q9HCJ5 1215 aa11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 PDRG1Q9NUG6 133 aa11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 SLAIN2Q9P270 581 aa11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 RBM8AQ9Y5S9 174 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 CYP46A1Q9Y6A2 500 aa11.23□□□□□ -0.61
CDK5RAP3-208ENST00000578525 SLC27A2O14975 620 aa11.22□□□□□ -0.61
CDK5RAP3-208ENST00000578525 ZKSCAN1P17029 563 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-208ENST00000578525 PSMA5P28066 241 aa11.22□□□□□ -0.61
CDK5RAP3-208ENST00000578525 KCNJ4P48050 445 aa11.22□□□□□ -0.61
CDK5RAP3-208ENST00000578525 TFCP2Q12800 502 aa11.22□□□□□ -0.61
CDK5RAP3-208ENST00000578525 GPT2Q8TD30 523 aa11.22□□□□□ -0.61
CDK5RAP3-208ENST00000578525 FAM227BQ96M60 508 aa11.22□□□□□ -0.61
CDK5RAP3-208ENST00000578525 SH2B1Q9NRF2 756 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-208ENST00000578525 CWC25Q9NXE8 425 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-208ENST00000578525 TOGARAM1Q9Y4F4 1720 aa11.22□□□□□ -0.61
CDK5RAP3-208ENST00000578525 A0A0D9SFI3 127 aa11.21□□□□□ -0.61
CDK5RAP3-208ENST00000578525 FOXO4P98177 505 aa11.21□□□□□ -0.61
CDK5RAP3-208ENST00000578525 RNF20Q5VTR2 975 aa11.21□□□□□ -0.61
CDK5RAP3-208ENST00000578525 TTLL7Q6ZT98 887 aa11.21□□□□□ -0.61
CDK5RAP3-208ENST00000578525 GPR108Q9NPR9 543 aa11.21□□□□□ -0.61
CDK5RAP3-208ENST00000578525 DBNLQ9UJU6 430 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-208ENST00000578525 SMC3Q9UQE7 1217 aa11.21□□□□□ -0.61
CDK5RAP3-208ENST00000578525 ZNF335Q9H4Z2 1342 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-208ENST00000578525 ZSCAN22P10073 491 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-208ENST00000578525 NASPP49321 788 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-208ENST00000578525 CCDC173Q0VFZ6 552 aa11.2□□□□□ -0.62
CDK5RAP3-208ENST00000578525 ADCK5Q3MIX3 580 aa11.2□□□□□ -0.62
CDK5RAP3-208ENST00000578525 LMBR1LQ6UX01 489 aa11.2□□□□□ -0.62
CDK5RAP3-208ENST00000578525 TMEM87AQ8NBN3 555 aa11.2□□□□□ -0.62
CDK5RAP3-208ENST00000578525 CHAMP1Q96JM3 812 aa11.2□□□□□ -0.62
CDK5RAP3-208ENST00000578525 ALDH8A1Q9H2A2 487 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-208ENST00000578525 RRAGDQ9NQL2 400 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-208ENST00000578525 HMG20BQ9P0W2 317 aa11.2□□□□□ -0.62
CDK5RAP3-208ENST00000578525 RBM27Q9P2N5 1060 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-208ENST00000578525 LARGE1O95461 756 aa11.19□□□□□ -0.62
CDK5RAP3-208ENST00000578525 A1BGP04217 495 aa11.19□□□□□ -0.62
CDK5RAP3-208ENST00000578525 CPA1P15085 419 aa11.19□□□□□ -0.62
CDK5RAP3-208ENST00000578525 EVA1CP58658 441 aa11.19□□□□□ -0.62
CDK5RAP3-208ENST00000578525 CCDC83Q8IWF9 413 aa11.19□□□□□ -0.62
CDK5RAP3-208ENST00000578525 CCDC191Q8NCU4 936 aa11.19□□□□□ -0.62
CDK5RAP3-208ENST00000578525 PPP1R9BQ96SB3 815 aa11.19□□□□□ -0.62
CDK5RAP3-208ENST00000578525 HAUS7Q99871 368 aa11.19□□□□□ -0.62
CDK5RAP3-208ENST00000578525 DBNDD2Q9BQY9 259 aa11.19□□□□□ -0.62
CDK5RAP3-208ENST00000578525 STRN4Q9NRL3 753 aa11.19□□□□□ -0.62
CDK5RAP3-208ENST00000578525 TMEM63CQ9P1W3 806 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms