RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 HOXA10P31260 410 aaPredicted RBP29.76■■■□□ 2.35
VAPA-205ENST00000578314 SLC10A5Q5PT55 438 aa29.76■■■□□ 2.35
VAPA-205ENST00000578314 ANKRD13DQ6ZTN6 518 aa29.76■■■□□ 2.35
VAPA-205ENST00000578314 C8orf58Q8NAV2 365 aa29.76■■■□□ 2.35
VAPA-205ENST00000578314 PLBD2Q8NHP8 589 aa29.76■■■□□ 2.35
VAPA-205ENST00000578314 SLX4Q8IY92 1834 aa29.75■■■□□ 2.35
VAPA-205ENST00000578314 ELL2O00472 640 aaPredicted RBP29.75■■■□□ 2.35
VAPA-205ENST00000578314 NLRP10Q86W26 655 aa29.75■■■□□ 2.35
VAPA-205ENST00000578314 TAOK3Q9H2K8 898 aa29.75■■■□□ 2.35
VAPA-205ENST00000578314 RNF123Q5XPI4 1314 aa29.74■■■□□ 2.35
VAPA-205ENST00000578314 TNRC6CQ9HCJ0 1690 aaKnown RBP29.74■■■□□ 2.35
VAPA-205ENST00000578314 CHMP4AQ9BY43 222 aa29.73■■■□□ 2.35
VAPA-205ENST00000578314 IL16Q14005 1332 aa29.72■■■□□ 2.35
VAPA-205ENST00000578314 CCDC88AQ3V6T2 1871 aa29.72■■■□□ 2.35
VAPA-205ENST00000578314 TIAM2Q8IVF5 1701 aa29.72■■■□□ 2.35
VAPA-205ENST00000578314 CCDC93Q567U6 631 aa29.72■■■□□ 2.35
VAPA-205ENST00000578314 C16orf71Q8IYS4 520 aaPredicted RBP29.71■■■□□ 2.35
VAPA-205ENST00000578314 NLRP3Q96P20 1036 aa29.71■■■□□ 2.35
VAPA-205ENST00000578314 ARFGEF2Q9Y6D5 1785 aa29.71■■■□□ 2.35
VAPA-205ENST00000578314 FER1L6Q2WGJ9 1857 aa29.71■■■□□ 2.35
VAPA-205ENST00000578314 CACNA1SQ13698 1873 aa29.7■■■□□ 2.35
VAPA-205ENST00000578314 C3orf67Q6ZVT6 689 aa29.7■■■□□ 2.35
VAPA-205ENST00000578314 RBM46Q8TBY0 533 aaKnown RBP29.7■■■□□ 2.35
VAPA-205ENST00000578314 RPGRQ92834 1020 aaKnown RBP29.7■■■□□ 2.35
VAPA-205ENST00000578314 GLTPD2A6NH11 291 aa29.69■■■□□ 2.34
VAPA-205ENST00000578314 RTKN2Q8IZC4 609 aa29.69■■■□□ 2.34
VAPA-205ENST00000578314 TSPYL6Q8N831 410 aa29.69■■■□□ 2.34
VAPA-205ENST00000578314 TSR2Q969E8 191 aaKnown RBP29.69■■■□□ 2.34
VAPA-205ENST00000578314 CRAMP1Q96RY5 1269 aa29.69■■■□□ 2.34
VAPA-205ENST00000578314 ISCA1Q9BUE6 129 aa29.69■■■□□ 2.34
VAPA-205ENST00000578314 RRAGCQ9HB90 399 aa29.69■■■□□ 2.34
VAPA-205ENST00000578314 CCDC30Q5VVM6 783 aa29.68■■■□□ 2.34
VAPA-205ENST00000578314 RBM17Q96I25 401 aaKnown RBP29.68■■■□□ 2.34
VAPA-205ENST00000578314 TRMT112Q9UI30 125 aaKnown RBP29.68■■■□□ 2.34
VAPA-205ENST00000578314 FKBP4Q02790 459 aaKnown RBP eCLIP29.67■■■□□ 2.34
VAPA-205ENST00000578314 OLFM4Q6UX06 510 aa29.67■■■□□ 2.34
VAPA-205ENST00000578314 PHAXQ9H814 394 aaKnown RBP29.67■■■□□ 2.34
VAPA-205ENST00000578314 TRIM28Q13263 835 aaKnown RBP29.66■■■□□ 2.34
VAPA-205ENST00000578314 WDR63Q8IWG1 891 aa29.66■■■□□ 2.34
VAPA-205ENST00000578314 SH3TC1Q8TE82 1336 aa29.66■■■□□ 2.34
VAPA-205ENST00000578314 APLP1P51693 650 aa29.65■■■□□ 2.34
VAPA-205ENST00000578314 CC2D2BQ6DHV5 1058 aa29.65■■■□□ 2.34
VAPA-205ENST00000578314 SYNE4Q8N205 404 aa29.65■■■□□ 2.34
VAPA-205ENST00000578314 FAM9BQ8IZU0 186 aa29.64■■■□□ 2.34
VAPA-205ENST00000578314 DICER1Q9UPY3 1922 aaKnown RBP29.64■■■□□ 2.34
VAPA-205ENST00000578314 HCLS1P14317 486 aaPredicted RBP29.63■■■□□ 2.33
VAPA-205ENST00000578314 GOLGA2Q08379 1002 aa29.63■■■□□ 2.33
VAPA-205ENST00000578314 DPY19L2Q6NUT2 758 aa29.63■■■□□ 2.33
VAPA-205ENST00000578314 ATP5J2-PTCD1G3V325 749 aa29.62■■■□□ 2.33
VAPA-205ENST00000578314 RIC3Q7Z5B4 369 aa29.62■■■□□ 2.33
VAPA-205ENST00000578314 SALL2Q9Y467 1007 aaPredicted RBP29.62■■■□□ 2.33
VAPA-205ENST00000578314 SNED1Q8TER0 1413 aa29.62■■■□□ 2.33
VAPA-205ENST00000578314 FSTL1Q12841 308 aa29.61■■■□□ 2.33
VAPA-205ENST00000578314 GRIPAP1Q4V328 841 aa29.61■■■□□ 2.33
VAPA-205ENST00000578314 PSMD1Q99460 953 aa29.61■■■□□ 2.33
VAPA-205ENST00000578314 ANKRD36CQ5JPF3 1778 aa29.6■■■□□ 2.33
VAPA-205ENST00000578314 TWISTNBQ3B726 338 aaPredicted RBP29.6■■■□□ 2.33
VAPA-205ENST00000578314 ZNF277Q9NRM2 450 aaPredicted RBP29.6■■■□□ 2.33
VAPA-205ENST00000578314 PPEF1O14829 653 aaPredicted RBP29.58■■■□□ 2.33
VAPA-205ENST00000578314 VEGFAP15692 232 aaPredicted RBP29.58■■■□□ 2.33
VAPA-205ENST00000578314 FAM89AQ96GI7 184 aa29.58■■■□□ 2.33
VAPA-205ENST00000578314 ABCC4O15439 1325 aa29.57■■■□□ 2.32
VAPA-205ENST00000578314 FANCIQ9NVI1 1328 aa29.57■■■□□ 2.32
VAPA-205ENST00000578314 DDX58O95786 925 aaKnown RBP29.57■■■□□ 2.32
VAPA-205ENST00000578314 BBOX1O75936 387 aa29.56■■■□□ 2.32
VAPA-205ENST00000578314 ZNF428Q96B54 188 aa29.56■■■□□ 2.32
VAPA-205ENST00000578314 STK31Q9BXU1 1019 aa29.56■■■□□ 2.32
VAPA-205ENST00000578314 WDR90Q96KV7 1748 aa29.56■■■□□ 2.32
VAPA-205ENST00000578314 POTECB2RU33 542 aa29.55■■■□□ 2.32
VAPA-205ENST00000578314 IARSP41252 1262 aaKnown RBP29.55■■■□□ 2.32
VAPA-205ENST00000578314 ATP6V0A2Q9Y487 856 aa29.55■■■□□ 2.32
VAPA-205ENST00000578314 DDX46Q7L014 1031 aaKnown RBP29.54■■■□□ 2.32
VAPA-205ENST00000578314 SMC1BQ8NDV3 1235 aa29.54■■■□□ 2.32
VAPA-205ENST00000578314 MYD88Q99836 296 aa29.54■■■□□ 2.32
VAPA-205ENST00000578314 METTL22Q9BUU2 404 aaPredicted RBP29.54■■■□□ 2.32
VAPA-205ENST00000578314 TCERG1O14776 1098 aaKnown RBP29.53■■■□□ 2.32
VAPA-205ENST00000578314 SF3B3Q15393 1217 aaKnown RBP29.53■■■□□ 2.32
VAPA-205ENST00000578314 KSR2Q6VAB6 950 aa29.53■■■□□ 2.32
VAPA-205ENST00000578314 ZBTB38Q8NAP3 1195 aaPredicted RBP29.53■■■□□ 2.32
VAPA-205ENST00000578314 CCDC191Q8NCU4 936 aa29.53■■■□□ 2.32
VAPA-205ENST00000578314 DDNO94850 711 aaPredicted RBP29.52■■■□□ 2.32
VAPA-205ENST00000578314 SLC51AQ86UW1 340 aa29.52■■■□□ 2.32
VAPA-205ENST00000578314 SPINK5Q9NQ38 1064 aaPredicted RBP29.52■■■□□ 2.32
VAPA-205ENST00000578314 VAMP4O75379 141 aa29.51■■■□□ 2.31
VAPA-205ENST00000578314 SLC4A2P04920 1241 aa29.51■■■□□ 2.31
VAPA-205ENST00000578314 GRAPQ13588 217 aa29.51■■■□□ 2.31
VAPA-205ENST00000578314 SP8Q8IXZ3 490 aa29.51■■■□□ 2.31
VAPA-205ENST00000578314 DNAJC5GQ8N7S2 189 aa29.51■■■□□ 2.31
VAPA-205ENST00000578314 GRAPLQ8TC17 118 aaPredicted RBP29.51■■■□□ 2.31
VAPA-205ENST00000578314 TMX4Q9H1E5 349 aaPredicted RBP29.51■■■□□ 2.31
VAPA-205ENST00000578314 FZD9O00144 591 aa29.5■■■□□ 2.31
VAPA-205ENST00000578314 IRS4O14654 1257 aaPredicted RBP29.5■■■□□ 2.31
VAPA-205ENST00000578314 MAP3K2Q9Y2U5 619 aa29.5■■■□□ 2.31
VAPA-205ENST00000578314 PI4KAP2A4QPH2 592 aa29.49■■■□□ 2.31
VAPA-205ENST00000578314 EXOSC9Q06265 439 aaKnown RBP29.49■■■□□ 2.31
VAPA-205ENST00000578314 RTL5Q5HYW3 569 aaPredicted RBP29.49■■■□□ 2.31
VAPA-205ENST00000578314 PI4KAP1Q8N8J0 262 aa29.49■■■□□ 2.31
VAPA-205ENST00000578314 G2E3Q7L622 706 aa29.48■■■□□ 2.31
VAPA-205ENST00000578314 MYH16Q9H6N6 1097 aa29.48■■■□□ 2.31
VAPA-205ENST00000578314 CWC25Q9NXE8 425 aaPredicted RBP29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms