RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 LARGE2Q8N3Y3 721 aa19.11■□□□□ 0.65
PPP4R1-206ENST00000577779 HHIPL1Q96JK4 782 aa19.11■□□□□ 0.65
PPP4R1-206ENST00000577779 SIPA1L3O60292 1781 aaPredicted RBP19.11■□□□□ 0.65
PPP4R1-206ENST00000577779 PRPF38BQ5VTL8 546 aaKnown RBP19.1■□□□□ 0.65
PPP4R1-206ENST00000577779 IL17REQ8NFR9 667 aa19.1■□□□□ 0.65
PPP4R1-206ENST00000577779 GNAT3A8MTJ3 354 aa19.09■□□□□ 0.65
PPP4R1-206ENST00000577779 GTF2E1P29083 439 aaPredicted RBP19.09■□□□□ 0.65
PPP4R1-206ENST00000577779 CC2D2BQ6DHV5 1058 aa19.09■□□□□ 0.65
PPP4R1-206ENST00000577779 ADARB2Q9NS39 739 aaKnown RBP19.09■□□□□ 0.65
PPP4R1-206ENST00000577779 HOXD11P31277 338 aaPredicted RBP19.08■□□□□ 0.64
PPP4R1-206ENST00000577779 KNSTRNQ9Y448 316 aa19.08■□□□□ 0.64
PPP4R1-206ENST00000577779 NIM1KQ8IY84 436 aa19.07■□□□□ 0.64
PPP4R1-206ENST00000577779 GLIS2Q9BZE0 524 aaPredicted RBP19.07■□□□□ 0.64
PPP4R1-206ENST00000577779 ZNF408Q9H9D4 720 aa19.07■□□□□ 0.64
PPP4R1-206ENST00000577779 USP16Q9Y5T5 823 aa19.07■□□□□ 0.64
PPP4R1-206ENST00000577779 KCNQ3O43525 872 aa19.06■□□□□ 0.64
PPP4R1-206ENST00000577779 NOGQ13253 232 aa19.06■□□□□ 0.64
PPP4R1-206ENST00000577779 GPRC5DQ9NZD1 345 aa19.06■□□□□ 0.64
PPP4R1-206ENST00000577779 BTBD11A6QL63 1104 aa19.05■□□□□ 0.64
PPP4R1-206ENST00000577779 DIAPH1O60610 1272 aaKnown RBP19.05■□□□□ 0.64
PPP4R1-206ENST00000577779 CRY2Q49AN0 593 aa19.05■□□□□ 0.64
PPP4R1-206ENST00000577779 GRIPAP1Q4V328 841 aa19.05■□□□□ 0.64
PPP4R1-206ENST00000577779 RGL2O15211 777 aa19.04■□□□□ 0.64
PPP4R1-206ENST00000577779 GAS2L2Q8NHY3 880 aa19.04■□□□□ 0.64
PPP4R1-206ENST00000577779 RPGRQ92834 1020 aaKnown RBP19.04■□□□□ 0.64
PPP4R1-206ENST00000577779 ZIC5Q96T25 663 aa19.04■□□□□ 0.64
PPP4R1-206ENST00000577779 PRAMEF22A3QJZ6 481 aa19.03■□□□□ 0.64
PPP4R1-206ENST00000577779 PPIP5K2O43314 1243 aa19.02■□□□□ 0.64
PPP4R1-206ENST00000577779 ABCC12Q96J65 1359 aa19.02■□□□□ 0.64
PPP4R1-206ENST00000577779 TCERG1O14776 1098 aaKnown RBP19.01■□□□□ 0.63
PPP4R1-206ENST00000577779 GMPSP49915 693 aaPredicted RBP19.01■□□□□ 0.63
PPP4R1-206ENST00000577779 HUNKP57058 714 aa19.01■□□□□ 0.63
PPP4R1-206ENST00000577779 HLFQ16534 295 aa19.01■□□□□ 0.63
PPP4R1-206ENST00000577779 NUTM1Q86Y26 1132 aa19.01■□□□□ 0.63
PPP4R1-206ENST00000577779 NYXQ9GZU5 481 aa19.01■□□□□ 0.63
PPP4R1-206ENST00000577779 PGAP2Q9UHJ9 254 aa19.01■□□□□ 0.63
PPP4R1-206ENST00000577779 CEMIPQ8WUJ3 1361 aa19.01■□□□□ 0.63
PPP4R1-206ENST00000577779 NPC1L1Q9UHC9 1359 aa19.01■□□□□ 0.63
PPP4R1-206ENST00000577779 PPEF1O14829 653 aaPredicted RBP19■□□□□ 0.63
PPP4R1-206ENST00000577779 SNRPA1P09661 255 aaKnown RBP19■□□□□ 0.63
PPP4R1-206ENST00000577779 HOXA10P31260 410 aaPredicted RBP19■□□□□ 0.63
PPP4R1-206ENST00000577779 AOC3Q16853 763 aa19■□□□□ 0.63
PPP4R1-206ENST00000577779 CDC37L1Q7L3B6 337 aa19■□□□□ 0.63
PPP4R1-206ENST00000577779 SLC51AQ86UW1 340 aa19■□□□□ 0.63
PPP4R1-206ENST00000577779 ZC3H15Q8WU90 426 aaKnown RBP19■□□□□ 0.63
PPP4R1-206ENST00000577779 SAGE1Q9NXZ1 904 aa19■□□□□ 0.63
PPP4R1-206ENST00000577779 NBPF26B4DH59 902 aa18.99■□□□□ 0.63
PPP4R1-206ENST00000577779 CXCL9Q07325 125 aa18.99■□□□□ 0.63
PPP4R1-206ENST00000577779 AMER1Q5JTC6 1135 aaPredicted RBP18.99■□□□□ 0.63
PPP4R1-206ENST00000577779 NBPF10Q6P3W6 841 aaKnown RBP18.99■□□□□ 0.63
PPP4R1-206ENST00000577779 NBPF15Q8N660 670 aa18.99■□□□□ 0.63
PPP4R1-206ENST00000577779 RBM17Q96I25 401 aaKnown RBP18.98■□□□□ 0.63
PPP4R1-206ENST00000577779 ZNRF3Q9ULT6 936 aa18.98■□□□□ 0.63
PPP4R1-206ENST00000577779 KIF7Q2M1P5 1343 aa18.98■□□□□ 0.63
PPP4R1-206ENST00000577779 U2SURPO15042 1029 aaKnown RBP18.97■□□□□ 0.63
PPP4R1-206ENST00000577779 HIRAP54198 1017 aaPredicted RBP18.97■□□□□ 0.63
PPP4R1-206ENST00000577779 BCL2L13Q9BXK5 485 aa18.97■□□□□ 0.63
PPP4R1-206ENST00000577779 TMX4Q9H1E5 349 aaPredicted RBP18.97■□□□□ 0.63
PPP4R1-206ENST00000577779 RIC1Q4ADV7 1423 aa18.97■□□□□ 0.63
PPP4R1-206ENST00000577779 CDHR2Q9BYE9 1310 aa18.97■□□□□ 0.63
PPP4R1-206ENST00000577779 TRPA1O75762 1119 aa18.96■□□□□ 0.63
PPP4R1-206ENST00000577779 HSPA5P11021 654 aaKnown RBP18.96■□□□□ 0.63
PPP4R1-206ENST00000577779 EIF4G2P78344 907 aaKnown RBP eCLIP18.96■□□□□ 0.63
PPP4R1-206ENST00000577779 CRAMP1Q96RY5 1269 aa18.96■□□□□ 0.63
PPP4R1-206ENST00000577779 VPS33BQ9H267 617 aa18.96■□□□□ 0.63
PPP4R1-206ENST00000577779 RGMBQ6NW40 437 aa18.95■□□□□ 0.62
PPP4R1-206ENST00000577779 USP48Q86UV5 1035 aa18.95■□□□□ 0.62
PPP4R1-206ENST00000577779 TRPM4Q8TD43 1214 aa18.95■□□□□ 0.62
PPP4R1-206ENST00000577779 RNF186Q9NXI6 227 aa18.95■□□□□ 0.62
PPP4R1-206ENST00000577779 AKAP11Q9UKA4 1901 aa18.94■□□□□ 0.62
PPP4R1-206ENST00000577779 FAM155AB1AL88 458 aaPredicted RBP18.94■□□□□ 0.62
PPP4R1-206ENST00000577779 KIF23Q02241 960 aaPredicted RBP18.94■□□□□ 0.62
PPP4R1-206ENST00000577779 CTU1Q7Z7A3 348 aaKnown RBP18.94■□□□□ 0.62
PPP4R1-206ENST00000577779 TNIP1Q15025 636 aa18.93■□□□□ 0.62
PPP4R1-206ENST00000577779 SUPT20HQ8NEM7 779 aa18.93■□□□□ 0.62
PPP4R1-206ENST00000577779 CCDC102AQ96A19 550 aa18.93■□□□□ 0.62
PPP4R1-206ENST00000577779 TIMELESSQ9UNS1 1208 aa18.93■□□□□ 0.62
PPP4R1-206ENST00000577779 NUP98P52948 1817 aa18.93■□□□□ 0.62
PPP4R1-206ENST00000577779 RAD17O75943 681 aa18.92■□□□□ 0.62
PPP4R1-206ENST00000577779 DLK2Q6UY11 383 aa18.92■□□□□ 0.62
PPP4R1-206ENST00000577779 NGEFQ8N5V2 710 aa18.92■□□□□ 0.62
PPP4R1-206ENST00000577779 MKI67P46013 3256 aaKnown RBP18.91■□□□□ 0.62
PPP4R1-206ENST00000577779 GPTP24298 496 aa18.91■□□□□ 0.62
PPP4R1-206ENST00000577779 ZNF157P51786 506 aaPredicted RBP18.91■□□□□ 0.62
PPP4R1-206ENST00000577779 C2orf69Q8N8R5 385 aa18.91■□□□□ 0.62
PPP4R1-206ENST00000577779 GCC1Q96CN9 775 aa18.91■□□□□ 0.62
PPP4R1-206ENST00000577779 GBA2Q9HCG7 927 aaPredicted RBP18.91■□□□□ 0.62
PPP4R1-206ENST00000577779 CNOT7Q9UIV1 285 aaKnown RBP18.91■□□□□ 0.62
PPP4R1-206ENST00000577779 HPS5Q9UPZ3 1129 aa18.91■□□□□ 0.62
PPP4R1-206ENST00000577779 ATP6V0A2Q9Y487 856 aa18.91■□□□□ 0.62
PPP4R1-206ENST00000577779 IBTKQ9P2D0 1353 aaPredicted RBP18.91■□□□□ 0.62
PPP4R1-206ENST00000577779 COL3A1P02461 1466 aaPredicted RBP18.9■□□□□ 0.62
PPP4R1-206ENST00000577779 ERVV-1B6SEH8 477 aa18.9■□□□□ 0.62
PPP4R1-206ENST00000577779 H7C1D1 291 aa18.9■□□□□ 0.62
PPP4R1-206ENST00000577779 PHACTR3Q96KR7 559 aa18.9■□□□□ 0.62
PPP4R1-206ENST00000577779 RTFDC1Q9BY42 306 aaPredicted RBP18.9■□□□□ 0.62
PPP4R1-206ENST00000577779 SHTN1A0MZ66 631 aa18.89■□□□□ 0.61
PPP4R1-206ENST00000577779 DPP8Q6V1X1 898 aaPredicted RBP18.89■□□□□ 0.61
PPP4R1-206ENST00000577779 C3orf67Q6ZVT6 689 aa18.89■□□□□ 0.61
PPP4R1-206ENST00000577779 KRT26Q7Z3Y9 468 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms