RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 IL1RAPL2Q9NP60 686 aa16.85■□□□□ 0.29
RNF43-202ENST00000577625 MX1P20591 662 aa16.84■□□□□ 0.29
RNF43-202ENST00000577625 CASP7P55210 303 aa16.84■□□□□ 0.29
RNF43-202ENST00000577625 SDSP20132 328 aa16.84■□□□□ 0.29
RNF43-202ENST00000577625 JARID2Q92833 1246 aaPredicted RBP16.84■□□□□ 0.29
RNF43-202ENST00000577625 MAP7D2Q96T17 732 aa16.84■□□□□ 0.29
RNF43-202ENST00000577625 PA2G4Q9UQ80 394 aaKnown RBP16.84■□□□□ 0.29
RNF43-202ENST00000577625 RREB1Q92766 1687 aa16.84■□□□□ 0.29
RNF43-202ENST00000577625 NUP98P52948 1817 aa16.83■□□□□ 0.29
RNF43-202ENST00000577625 A0A087WZG4 1122 aa16.83■□□□□ 0.28
RNF43-202ENST00000577625 MCM4P33991 863 aa16.83■□□□□ 0.28
RNF43-202ENST00000577625 HSPA1LP34931 641 aa16.83■□□□□ 0.28
RNF43-202ENST00000577625 RBM25P49756 843 aaKnown RBP16.83■□□□□ 0.28
RNF43-202ENST00000577625 TSHZ3Q63HK5 1081 aa16.83■□□□□ 0.28
RNF43-202ENST00000577625 STAP2Q9UGK3 403 aa16.83■□□□□ 0.28
RNF43-202ENST00000577625 MYH14Q7Z406 1995 aaKnown RBP16.83■□□□□ 0.28
RNF43-202ENST00000577625 TRIM44Q96DX7 344 aaPredicted RBP16.82■□□□□ 0.28
RNF43-202ENST00000577625 AOX1Q06278 1338 aa16.82■□□□□ 0.28
RNF43-202ENST00000577625 GRPEL1Q9HAV7 217 aa16.82■□□□□ 0.28
RNF43-202ENST00000577625 CWC25Q9NXE8 425 aaPredicted RBP16.82■□□□□ 0.28
RNF43-202ENST00000577625 USP21Q9UK80 565 aa16.82■□□□□ 0.28
RNF43-202ENST00000577625 ZNF330Q9Y3S2 320 aaPredicted RBP16.82■□□□□ 0.28
RNF43-202ENST00000577625 H7C1W4 665 aa16.81■□□□□ 0.28
RNF43-202ENST00000577625 RABL6Q3YEC7 729 aaPredicted RBP16.81■□□□□ 0.28
RNF43-202ENST00000577625 COL5A3P25940 1745 aaPredicted RBP16.81■□□□□ 0.28
RNF43-202ENST00000577625 A0A0G2JS52 829 aa16.81■□□□□ 0.28
RNF43-202ENST00000577625 OS9Q13438 667 aaPredicted RBP16.81■□□□□ 0.28
RNF43-202ENST00000577625 CCDC191Q8NCU4 936 aa16.81■□□□□ 0.28
RNF43-202ENST00000577625 ZBTB1Q9Y2K1 713 aa16.81■□□□□ 0.28
RNF43-202ENST00000577625 ZNF831Q5JPB2 1677 aa16.8■□□□□ 0.28
RNF43-202ENST00000577625 KIF6Q6ZMV9 814 aa16.8■□□□□ 0.28
RNF43-202ENST00000577625 ISCA1Q9BUE6 129 aa16.8■□□□□ 0.28
RNF43-202ENST00000577625 TERF1P54274 439 aa16.79■□□□□ 0.28
RNF43-202ENST00000577625 NUTM1Q86Y26 1132 aa16.79■□□□□ 0.28
RNF43-202ENST00000577625 ERC1Q8IUD2 1116 aa16.79■□□□□ 0.28
RNF43-202ENST00000577625 MAP3K15Q6ZN16 1313 aa16.79■□□□□ 0.28
RNF43-202ENST00000577625 TCIRG1Q13488 830 aa16.79■□□□□ 0.28
RNF43-202ENST00000577625 CASC1Q6TDU7 716 aa16.79■□□□□ 0.28
RNF43-202ENST00000577625 KIAA1211Q6ZU35 1233 aa16.79■□□□□ 0.28
RNF43-202ENST00000577625 GZF1Q9H116 711 aaPredicted RBP16.79■□□□□ 0.28
RNF43-202ENST00000577625 PALLDQ8WX93 1383 aa16.79■□□□□ 0.28
RNF43-202ENST00000577625 KCNQ2O43526 872 aa16.78■□□□□ 0.28
RNF43-202ENST00000577625 RFX5P48382 616 aaPredicted RBP16.78■□□□□ 0.28
RNF43-202ENST00000577625 TRAK2O60296 914 aa16.78■□□□□ 0.28
RNF43-202ENST00000577625 BTAF1O14981 1849 aa16.77■□□□□ 0.28
RNF43-202ENST00000577625 NHSQ6T4R5 1651 aa16.77■□□□□ 0.28
RNF43-202ENST00000577625 LOC102724428A0A0B4J2F2 783 aa16.77■□□□□ 0.28
RNF43-202ENST00000577625 SASH1O94885 1247 aa16.77■□□□□ 0.28
RNF43-202ENST00000577625 SIK1P57059 783 aa16.77■□□□□ 0.28
RNF43-202ENST00000577625 FOXO4P98177 505 aa16.77■□□□□ 0.28
RNF43-202ENST00000577625 KLHDC4Q8TBB5 520 aa16.77■□□□□ 0.28
RNF43-202ENST00000577625 USP42Q9H9J4 1324 aaKnown RBP16.77■□□□□ 0.28
RNF43-202ENST00000577625 MYH3P11055 1940 aa16.77■□□□□ 0.28
RNF43-202ENST00000577625 IL6STP40189 918 aaPredicted RBP16.77■□□□□ 0.27
RNF43-202ENST00000577625 TRIM28Q13263 835 aaKnown RBP16.77■□□□□ 0.27
RNF43-202ENST00000577625 MEX3CQ5U5Q3 659 aaKnown RBP16.77■□□□□ 0.27
RNF43-202ENST00000577625 GIGYF2Q6Y7W6 1299 aaKnown RBP16.77■□□□□ 0.27
RNF43-202ENST00000577625 SMAP1Q8IYB5 467 aaPredicted RBP16.77■□□□□ 0.27
RNF43-202ENST00000577625 PI4K2BQ8TCG2 481 aa16.77■□□□□ 0.27
RNF43-202ENST00000577625 COPRSQ9NQ92 184 aa16.77■□□□□ 0.27
RNF43-202ENST00000577625 G3BP1Q13283 466 aaKnown RBP eCLIP16.76■□□□□ 0.27
RNF43-202ENST00000577625 CLASRPQ8N2M8 674 aaKnown RBP16.76■□□□□ 0.27
RNF43-202ENST00000577625 SIL1Q9H173 461 aa16.76■□□□□ 0.27
RNF43-202ENST00000577625 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.76■□□□□ 0.27
RNF43-202ENST00000577625 SBF2Q86WG5 1849 aa16.76■□□□□ 0.27
RNF43-202ENST00000577625 ATP6V1AP38606 617 aa16.75■□□□□ 0.27
RNF43-202ENST00000577625 PTPN12Q05209 780 aaKnown RBP16.75■□□□□ 0.27
RNF43-202ENST00000577625 ITPK1Q13572 414 aa16.75■□□□□ 0.27
RNF43-202ENST00000577625 TBC1D2Q9BYX2 928 aa16.75■□□□□ 0.27
RNF43-202ENST00000577625 AFF2P51816 1311 aa16.75■□□□□ 0.27
RNF43-202ENST00000577625 HLFQ16534 295 aa16.75■□□□□ 0.27
RNF43-202ENST00000577625 INTS5Q6P9B9 1019 aaKnown RBP16.75■□□□□ 0.27
RNF43-202ENST00000577625 LMBR1LQ6UX01 489 aa16.75■□□□□ 0.27
RNF43-202ENST00000577625 SMARCC1Q92922 1105 aaPredicted RBP16.75■□□□□ 0.27
RNF43-202ENST00000577625 ATRNO75882 1429 aa16.74■□□□□ 0.27
RNF43-202ENST00000577625 CRKLP46109 303 aaKnown RBP16.74■□□□□ 0.27
RNF43-202ENST00000577625 CCDC87Q9NVE4 849 aa16.74■□□□□ 0.27
RNF43-202ENST00000577625 TTC41PQ6P2S7 1318 aa16.74■□□□□ 0.27
RNF43-202ENST00000577625 PDE4CQ08493 712 aa16.74■□□□□ 0.27
RNF43-202ENST00000577625 EIF5P55010 431 aaKnown RBP16.73■□□□□ 0.27
RNF43-202ENST00000577625 GJD4Q96KN9 370 aaPredicted RBP16.73■□□□□ 0.27
RNF43-202ENST00000577625 KIF2CQ99661 725 aa16.73■□□□□ 0.27
RNF43-202ENST00000577625 BCORQ6W2J9 1755 aa16.73■□□□□ 0.27
RNF43-202ENST00000577625 OFD1O75665 1012 aa16.72■□□□□ 0.27
RNF43-202ENST00000577625 AACSQ86V21 672 aa16.72■□□□□ 0.27
RNF43-202ENST00000577625 DZIP3Q86Y13 1208 aaKnown RBP16.72■□□□□ 0.27
RNF43-202ENST00000577625 DDX11L8A8MPP1 907 aa16.72■□□□□ 0.27
RNF43-202ENST00000577625 TRIM6-TRIM34B2RNG4 842 aa16.72■□□□□ 0.27
RNF43-202ENST00000577625 ERVV-1B6SEH8 477 aa16.72■□□□□ 0.27
RNF43-202ENST00000577625 ERC2O15083 957 aa16.72■□□□□ 0.27
RNF43-202ENST00000577625 REC8O95072 547 aa16.72■□□□□ 0.27
RNF43-202ENST00000577625 PCCAP05165 728 aaPredicted RBP16.72■□□□□ 0.27
RNF43-202ENST00000577625 HSP90AB3PQ58FF7 597 aa16.72■□□□□ 0.27
RNF43-202ENST00000577625 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.72■□□□□ 0.27
RNF43-202ENST00000577625 RILPL2Q969X0 211 aa16.72■□□□□ 0.27
RNF43-202ENST00000577625 EAF2Q96CJ1 260 aaPredicted RBP16.72■□□□□ 0.27
RNF43-202ENST00000577625 USP26Q9BXU7 913 aa16.72■□□□□ 0.27
RNF43-202ENST00000577625 IFIT2P09913 472 aaKnown RBP16.71■□□□□ 0.27
RNF43-202ENST00000577625 NLRP10Q86W26 655 aa16.71■□□□□ 0.27
RNF43-202ENST00000577625 TBC1D2BQ9UPU7 963 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms