RNA–Protein interactions for RNA: ENST00000577589.1

CUEDC1-205, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-205ENST00000577589 USP16Q9Y5T5 823 aa17.07■□□□□ 0.32
CUEDC1-205ENST00000577589 NUP98P52948 1817 aa17.06■□□□□ 0.32
CUEDC1-205ENST00000577589 GPRC5DQ9NZD1 345 aa17.06■□□□□ 0.32
CUEDC1-205ENST00000577589 FAM177BA6PVY3 158 aa17.05■□□□□ 0.32
CUEDC1-205ENST00000577589 NBPF26B4DH59 902 aa17.05■□□□□ 0.32
CUEDC1-205ENST00000577589 NBPF10Q6P3W6 841 aaKnown RBP17.05■□□□□ 0.32
CUEDC1-205ENST00000577589 NBPF15Q8N660 670 aa17.05■□□□□ 0.32
CUEDC1-205ENST00000577589 NIP7Q9Y221 180 aaKnown RBP eCLIP17.05■□□□□ 0.32
CUEDC1-205ENST00000577589 LAMB4A4D0S4 1761 aa17.05■□□□□ 0.32
CUEDC1-205ENST00000577589 ALDH1B1P30837 517 aa17.04■□□□□ 0.32
CUEDC1-205ENST00000577589 TEFQ10587 303 aa17.04■□□□□ 0.32
CUEDC1-205ENST00000577589 AMER1Q5JTC6 1135 aaPredicted RBP17.04■□□□□ 0.32
CUEDC1-205ENST00000577589 TPTE2Q6XPS3 522 aa17.04■□□□□ 0.32
CUEDC1-205ENST00000577589 ADARB2Q9NS39 739 aaKnown RBP17.04■□□□□ 0.32
CUEDC1-205ENST00000577589 PGAP2Q9UHJ9 254 aa17.04■□□□□ 0.32
CUEDC1-205ENST00000577589 HLFQ16534 295 aa17.03■□□□□ 0.32
CUEDC1-205ENST00000577589 LARGE2Q8N3Y3 721 aa17.03■□□□□ 0.32
CUEDC1-205ENST00000577589 AKAP11Q9UKA4 1901 aa17.02■□□□□ 0.32
CUEDC1-205ENST00000577589 RGL2O15211 777 aa17.02■□□□□ 0.32
CUEDC1-205ENST00000577589 HIRAP54198 1017 aaPredicted RBP17.02■□□□□ 0.32
CUEDC1-205ENST00000577589 DLK2Q6UY11 383 aa17.02■□□□□ 0.32
CUEDC1-205ENST00000577589 ZNF652Q9Y2D9 606 aa17.02■□□□□ 0.32
CUEDC1-205ENST00000577589 NPC1L1Q9UHC9 1359 aa17.02■□□□□ 0.31
CUEDC1-205ENST00000577589 GNAT3A8MTJ3 354 aa17.01■□□□□ 0.31
CUEDC1-205ENST00000577589 FAM155AB1AL88 458 aaPredicted RBP17.01■□□□□ 0.31
CUEDC1-205ENST00000577589 HOXA10P31260 410 aaPredicted RBP17.01■□□□□ 0.31
CUEDC1-205ENST00000577589 CC2D2BQ6DHV5 1058 aa17.01■□□□□ 0.31
CUEDC1-205ENST00000577589 NUTM1Q86Y26 1132 aa17.01■□□□□ 0.31
CUEDC1-205ENST00000577589 CENPFP49454 3210 aa17.01■□□□□ 0.31
CUEDC1-205ENST00000577589 POLR2AP24928 1970 aaKnown RBP17■□□□□ 0.31
CUEDC1-205ENST00000577589 SHTN1A0MZ66 631 aa17■□□□□ 0.31
CUEDC1-205ENST00000577589 GMPSP49915 693 aaPredicted RBP17■□□□□ 0.31
CUEDC1-205ENST00000577589 CXCL9Q07325 125 aa17■□□□□ 0.31
CUEDC1-205ENST00000577589 NOGQ13253 232 aa17■□□□□ 0.31
CUEDC1-205ENST00000577589 NPM2Q86SE8 214 aaKnown RBP17■□□□□ 0.31
CUEDC1-205ENST00000577589 TRPM4Q8TD43 1214 aa17■□□□□ 0.31
CUEDC1-205ENST00000577589 ZNF408Q9H9D4 720 aa17■□□□□ 0.31
CUEDC1-205ENST00000577589 LAMB2P55268 1798 aa17■□□□□ 0.31
CUEDC1-205ENST00000577589 C3orf67Q6ZVT6 689 aa16.99■□□□□ 0.31
CUEDC1-205ENST00000577589 NIM1KQ8IY84 436 aa16.99■□□□□ 0.31
CUEDC1-205ENST00000577589 KIF7Q2M1P5 1343 aa16.98■□□□□ 0.31
CUEDC1-205ENST00000577589 DUOX1Q9NRD9 1551 aa16.98■□□□□ 0.31
CUEDC1-205ENST00000577589 DIAPH1O60610 1272 aaKnown RBP16.98■□□□□ 0.31
CUEDC1-205ENST00000577589 AOC3Q16853 763 aa16.98■□□□□ 0.31
CUEDC1-205ENST00000577589 BRCA2P51587 3418 aa16.98■□□□□ 0.31
CUEDC1-205ENST00000577589 UBN2Q6ZU65 1347 aa16.97■□□□□ 0.31
CUEDC1-205ENST00000577589 BTBD11A6QL63 1104 aa16.97■□□□□ 0.31
CUEDC1-205ENST00000577589 PPIP5K2O43314 1243 aa16.97■□□□□ 0.31
CUEDC1-205ENST00000577589 HUNKP57058 714 aa16.97■□□□□ 0.31
CUEDC1-205ENST00000577589 SAGE1Q9NXZ1 904 aa16.97■□□□□ 0.31
CUEDC1-205ENST00000577589 PPEF1O14829 653 aaPredicted RBP16.96■□□□□ 0.31
CUEDC1-205ENST00000577589 GAS2L2Q8NHY3 880 aa16.96■□□□□ 0.31
CUEDC1-205ENST00000577589 IBTKQ9P2D0 1353 aaPredicted RBP16.96■□□□□ 0.31
CUEDC1-205ENST00000577589 HSPA5P11021 654 aaKnown RBP16.95■□□□□ 0.3
CUEDC1-205ENST00000577589 ZC3H15Q8WU90 426 aaKnown RBP16.95■□□□□ 0.3
CUEDC1-205ENST00000577589 PHACTR3Q96KR7 559 aa16.95■□□□□ 0.3
CUEDC1-205ENST00000577589 KNSTRNQ9Y448 316 aa16.95■□□□□ 0.3
CUEDC1-205ENST00000577589 CDHR2Q9BYE9 1310 aa16.95■□□□□ 0.3
CUEDC1-205ENST00000577589 SZT2Q5T011 3432 aa16.95■□□□□ 0.3
CUEDC1-205ENST00000577589 TCERG1O14776 1098 aaKnown RBP16.94■□□□□ 0.3
CUEDC1-205ENST00000577589 SNRPA1P09661 255 aaKnown RBP16.94■□□□□ 0.3
CUEDC1-205ENST00000577589 GRIPAP1Q4V328 841 aa16.94■□□□□ 0.3
CUEDC1-205ENST00000577589 RPGRQ92834 1020 aaKnown RBP16.94■□□□□ 0.3
CUEDC1-205ENST00000577589 CRAMP1Q96RY5 1269 aa16.94■□□□□ 0.3
CUEDC1-205ENST00000577589 RNF186Q9NXI6 227 aa16.94■□□□□ 0.3
CUEDC1-205ENST00000577589 ZNRF3Q9ULT6 936 aa16.94■□□□□ 0.3
CUEDC1-205ENST00000577589 TAF1P21675 1872 aa16.93■□□□□ 0.3
CUEDC1-205ENST00000577589 KIF23Q02241 960 aaPredicted RBP16.93■□□□□ 0.3
CUEDC1-205ENST00000577589 CDC37L1Q7L3B6 337 aa16.93■□□□□ 0.3
CUEDC1-205ENST00000577589 USP48Q86UV5 1035 aa16.93■□□□□ 0.3
CUEDC1-205ENST00000577589 RTFDC1Q9BY42 306 aaPredicted RBP16.93■□□□□ 0.3
CUEDC1-205ENST00000577589 LRRC37AA6NMS7 1700 aa16.93■□□□□ 0.3
CUEDC1-205ENST00000577589 KDM3BQ7LBC6 1761 aa16.92■□□□□ 0.3
CUEDC1-205ENST00000577589 YDJCA8MPS7 323 aa16.92■□□□□ 0.3
CUEDC1-205ENST00000577589 TRPA1O75762 1119 aa16.92■□□□□ 0.3
CUEDC1-205ENST00000577589 EGFRP00533 1210 aa16.92■□□□□ 0.3
CUEDC1-205ENST00000577589 GTF2E1P29083 439 aaPredicted RBP16.92■□□□□ 0.3
CUEDC1-205ENST00000577589 RGMBQ6NW40 437 aa16.92■□□□□ 0.3
CUEDC1-205ENST00000577589 CTU1Q7Z7A3 348 aaKnown RBP16.92■□□□□ 0.3
CUEDC1-205ENST00000577589 NYXQ9GZU5 481 aa16.92■□□□□ 0.3
CUEDC1-205ENST00000577589 HPS5Q9UPZ3 1129 aa16.92■□□□□ 0.3
CUEDC1-205ENST00000577589 ANKRD36CQ5JPF3 1778 aa16.92■□□□□ 0.3
CUEDC1-205ENST00000577589 RAD17O75943 681 aa16.91■□□□□ 0.3
CUEDC1-205ENST00000577589 NTSR2O95665 410 aa16.91■□□□□ 0.3
CUEDC1-205ENST00000577589 ATP6V0A2Q9Y487 856 aa16.91■□□□□ 0.3
CUEDC1-205ENST00000577589 SUSD4Q5VX71 490 aa16.9■□□□□ 0.3
CUEDC1-205ENST00000577589 SLC10A3P09131 477 aa16.89■□□□□ 0.29
CUEDC1-205ENST00000577589 GPTP24298 496 aa16.89■□□□□ 0.29
CUEDC1-205ENST00000577589 TTLL7Q6ZT98 887 aa16.89■□□□□ 0.29
CUEDC1-205ENST00000577589 RBM17Q96I25 401 aaKnown RBP16.89■□□□□ 0.29
CUEDC1-205ENST00000577589 CSRNP1Q96S65 589 aa16.89■□□□□ 0.29
CUEDC1-205ENST00000577589 VPS33BQ9H267 617 aa16.89■□□□□ 0.29
CUEDC1-205ENST00000577589 ABCC4O15439 1325 aa16.89■□□□□ 0.29
CUEDC1-205ENST00000577589 MAP3K15Q6ZN16 1313 aa16.89■□□□□ 0.29
CUEDC1-205ENST00000577589 A0A0C4DFX4 3053 aa16.88■□□□□ 0.29
CUEDC1-205ENST00000577589 ERVV-1B6SEH8 477 aa16.88■□□□□ 0.29
CUEDC1-205ENST00000577589 ADM5C9JUS6 153 aa16.88■□□□□ 0.29
CUEDC1-205ENST00000577589 U2SURPO15042 1029 aaKnown RBP16.88■□□□□ 0.29
CUEDC1-205ENST00000577589 KIAA2012Q0VF49 1180 aa16.88■□□□□ 0.29
CUEDC1-205ENST00000577589 MCM10Q7L590 875 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms