RNA–Protein interactions for RNA: ENST00000577524.5

ARHGAP28-208, Transcript of Rho GTPase activating protein 28, human

TSL 5

Gene ARHGAP28, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP28-208	ENST00000577524	GIGYF2	Q6Y7W6	1299 aa	Known RBP	7.01	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	TTLL7	Q6ZT98	887 aa		7.01	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	TAOK3	Q9H2K8	898 aa		7.01	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	ADCY9	O60503	1353 aa		7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	GOLGA2	Q08379	1002 aa		7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	ERFE	Q4G0M1	354 aa		7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	DUSP27	Q5VZP5	1158 aa		7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	COPS6	Q7L5N1	327 aa		7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	NUTM1	Q86Y26	1132 aa		7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	XAGE3	Q8WTP9	111 aa		7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	RBM17	Q96I25	401 aa	Known RBP	7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	NLRP3	Q96P20	1036 aa		7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	UTP14A	Q9BVJ6	771 aa	Known RBP	7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	DDX21	Q9NR30	783 aa	Known RBP eCLIP	7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	IFT57	Q9NWB7	429 aa		7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	HYPK	Q9NX55	129 aa		7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	DBF4	Q9UBU7	674 aa	Predicted RBP	7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	TRIM35	Q9UPQ4	493 aa		7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	SIPA1L3	O60292	1781 aa	Predicted RBP	7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	N4BP2	Q86UW6	1770 aa	Predicted RBP	7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	ZC3H4	Q9UPT8	1303 aa	Known RBP	7	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	VIRMA	Q69YN4	1812 aa	Known RBP	6.99	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	ELL2	O00472	640 aa	Predicted RBP	6.99	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	TOMM70	O94826	608 aa		6.99	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	DDX58	O95786	925 aa	Known RBP	6.99	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	ANXA1	P04083	346 aa		6.99	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	SUSD4	Q5VX71	490 aa		6.99	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	CC2D2B	Q6DHV5	1058 aa		6.99	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	RIC3	Q7Z5B4	369 aa		6.99	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	RTKN2	Q8IZC4	609 aa		6.99	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	STK31	Q9BXU1	1019 aa		6.99	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	RRAGC	Q9HB90	399 aa		6.99	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	MBIP	Q9NS73	344 aa		6.99	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	CHPF2	Q9P2E5	772 aa		6.99	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	TRMT112	Q9UI30	125 aa	Known RBP	6.99	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	KIF13B	Q9NQT8	1826 aa		6.99	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	SCN7A	Q01118	1682 aa		6.98	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	GLTPD2	A6NH11	291 aa		6.98	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	HSP90B1	P14625	803 aa	Known RBP	6.98	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	KRT24	Q2M2I5	525 aa		6.98	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	PROSER3	Q2NL68	480 aa		6.98	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	GRIPAP1	Q4V328	841 aa		6.98	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	CCDC30	Q5VVM6	783 aa		6.98	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	ANKRD13D	Q6ZTN6	518 aa		6.98	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	ZNF34	Q8IZ26	560 aa		6.98	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	PLBD2	Q8NHP8	589 aa		6.98	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	JDP2	Q8WYK2	163 aa		6.98	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	NMRK2	Q9NPI5	230 aa		6.98	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	RNF123	Q5XPI4	1314 aa		6.98	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	LTBP3	Q9NS15	1303 aa		6.98	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	IBTK	Q9P2D0	1353 aa	Predicted RBP	6.97	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	KLRG2	A4D1S0	409 aa	Predicted RBP	6.97	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	NFKBIE	O00221	500 aa		6.97	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	TCERG1	O14776	1098 aa	Known RBP	6.97	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	KIF3C	O14782	793 aa		6.97	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	VEGFA	P15692	232 aa	Predicted RBP	6.97	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	HSPA6	P17066	643 aa		6.97	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	FKBP4	Q02790	459 aa	Known RBP eCLIP	6.97	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	TCIRG1	Q13488	830 aa		6.97	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	PDIA6	Q15084	440 aa		6.97	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	DDX46	Q7L014	1031 aa	Known RBP	6.97	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	FAM9B	Q8IZU0	186 aa		6.97	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	RBM46	Q8TBY0	533 aa	Known RBP	6.97	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	TSPYL2	Q9H2G4	693 aa	Predicted RBP	6.97	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	SALL2	Q9Y467	1007 aa	Predicted RBP	6.97	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	SH3TC1	Q8TE82	1336 aa		6.97	□□□□□ -1.29
ARHGAP28-208	ENST00000577524	KDM3B	Q7LBC6	1761 aa		6.96	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	IQCA1L	A6NCM1	817 aa		6.96	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	PPEF1	O14829	653 aa	Predicted RBP	6.96	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	NTSR2	O95665	410 aa		6.96	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	ZNF853	P0CG23	659 aa		6.96	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	APLP1	P51693	650 aa		6.96	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	EIF6	P56537	245 aa	Known RBP	6.96	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	NEXN	Q0ZGT2	675 aa		6.96	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	FSTL1	Q12841	308 aa		6.96	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	CCDC27	Q2M243	656 aa		6.96	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	NLRP10	Q86W26	655 aa		6.96	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	SYNE4	Q8N205	404 aa		6.96	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	SMC1B	Q8NDV3	1235 aa		6.96	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	SUPT20H	Q8NEM7	779 aa		6.96	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	CRAMP1	Q96RY5	1269 aa		6.96	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	UBN2	Q6ZU65	1347 aa		6.96	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	NRXN2	Q9P2S2	1712 aa		6.96	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	DLG5	Q8TDM6	1919 aa		6.95	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	ABCC12	Q96J65	1359 aa		6.95	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	LAMB4	A4D0S4	1761 aa		6.95	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	AFDN	P55196	1824 aa	Known RBP	6.95	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	ATP5J2-PTCD1	G3V325	749 aa		6.95	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	POTEB2	H3BUK9	544 aa		6.95	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	BBOX1	O75936	387 aa		6.95	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	HCLS1	P14317	486 aa	Predicted RBP	6.95	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	HOXA10	P31260	410 aa	Predicted RBP	6.95	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	IARS	P41252	1262 aa	Known RBP	6.95	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	PLCB2	Q00722	1185 aa		6.95	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	CRY2	Q49AN0	593 aa		6.95	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	SLC10A5	Q5PT55	438 aa		6.95	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	WWC1	Q8IX03	1113 aa		6.95	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	MIER1	Q8N108	512 aa		6.95	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	LARGE2	Q8N3Y3	721 aa		6.95	□□□□□ -1.3
ARHGAP28-208	ENST00000577524	ZNF277	Q9NRM2	450 aa	Predicted RBP	6.95	□□□□□ -1.3

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